Array 1 25664-22670 **** Predicted by CRISPRDetect 2.4 *** >NZ_RRCP01000035.1 Xanthomonas vasicola pv. musacearum strain E52 scf_32335_35, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ===================================== ================== 25663 31 100.0 35 ............................... GCCCCCGATCCAGCAGAAAGCTGCCGGCGATCAAA 25597 31 100.0 34 ............................... TAAAAATGTGATCTATCTACGAGACGTGCTGCTG 25532 31 100.0 34 ............................... GGTAGAAACAAGGCACCCTTTGAAAGGTTTCGTG 25467 31 100.0 36 ............................... GATCACCATCTTGATCGTGCCGAAATTAATGCCCAG 25400 31 100.0 34 ............................... GAAGGCGGGTCTTCAGGGGTGCATTCCTGACGTT 25335 31 100.0 35 ............................... TCGTCCGTTTCGGCTATCTTTTTCAGATCGATCAG 25269 31 100.0 34 ............................... ATTGACCCGCCATAGAGTGCAGCCACATCCTCGA 25204 31 100.0 35 ............................... CTGAACCAGTCCTCCGGGATACCTGTGATGCTCTT 25138 31 100.0 35 ............................... ATATCAACGGTGTACGTGATGATAATCGCCTGTGC 25072 31 100.0 34 ............................... ACGGTATCTGGGTATACCGAAAAATAAGCTGCGA 25007 31 100.0 34 ............................... GTCTATGACGTCACGACCTGGATTTTACGCAACG 24942 31 100.0 35 ............................... GCTCCTCCACAGCCTTAGTTGAGTCATGGCATAGC 24876 31 100.0 34 ............................... CAGTTCTACGCAGAACACGAAACAATGACGACAT 24811 31 100.0 35 ............................... CTTTAGCAGGCGTTCACCACTCTCTTGATCATATG 24745 31 100.0 33 ............................... CTGGTGTGTCTGTCTACCTTGGTAAGAGTTGGC 24681 31 100.0 37 ............................... CAAGTCCACCTTGTCATAACCGTACCGATTCGCACCG 24613 31 100.0 36 ............................... CTTACTCAGCTGCATGGCTAGTGCACTTCGCTTATT 24546 31 100.0 35 ............................... AACCAACGCAAGTCTTCCGGGGCGTCTGGATCTGC 24480 31 100.0 36 ............................... CTGAAGCCCTGCCAGGTTACGTACCTTCCGAAGGGA 24413 31 100.0 35 ............................... CAGTCCTGAATAATGTCCTCATGCCCAATGAACTG 24347 31 100.0 37 ............................... CCTTGCGTTCGCCTGTCTTTGGGTCTCCCGTCCAGTG 24279 31 100.0 35 ............................... AGATTTTGGCGGTGCATCTGTTGTACTCCCTCTGC 24213 31 100.0 35 ............................... CCACTGTGGCAGGGCCTTGACATAACCGGGGAAGC 24147 31 100.0 36 ............................... AGTACAGGTCACTGCATAGTGCCTACTGCAGTACGG 24080 31 100.0 35 ............................... CAATATGGAGAGTTCCTGATGGACTACCTAGTTGA 24014 31 100.0 34 ............................... TCGCCAGAGAGCCTTACCAGCGAACTTGCCGTGG 23949 31 100.0 34 ............................... TTAGCAAGCATGCCAACGTAGAGGTGGGCCTGAA 23884 31 100.0 34 ............................... TTAGCACCACCAGCAAAGCGGGCTAGCTGATACT 23819 31 100.0 36 ............................... AGGCACTGCACTGTCCCAGCCATTGGGGCCCTTTGA 23752 31 100.0 32 ............................... ACAAAATAAGGAGGCCCTATGGCCGAGCAAAA 23689 31 100.0 35 ............................... TTTGTCGGCTTTTTCAGCAAGGGCAAGCAGGAGAC 23623 31 100.0 34 ............................... GAGCTATGCGTGTTCGAACCAGTGCCAGTACACA 23558 31 100.0 36 ............................... AGCAATGTGGATTCGCAGGCTGGCGGCTCGTTACAG 23491 31 100.0 34 ............................... TGGGAGACTGTCAGACAATAAGCTGGTGCTGACG 23426 31 100.0 35 ............................... TGCAGGATGCACAGAACCACCAAGCATGGATGCAG 23360 31 100.0 35 ............................... CTAAGTGATAGCGAAGAATGCAGGCGGCTGACCTA 23294 31 100.0 35 ............................... AAGACTTGGTACTTTGACGAGAGTGCAGAGGGGTG 23228 31 100.0 35 ............................... ACTCTTTTGTACCAGCAGCGCATCATTCTGCGCCA 23162 31 100.0 34 ............................... CTGTGCTGCATGGCGCACGCGAGATTGCAGAGTT 23097 31 100.0 35 ............................... TTTGTCAAACATGGTAGCGGCCTCCGTTGGTGTAG 23031 31 100.0 35 ............................... GTTTCCAAGGTCGCAGCCAACGTCACCCGCATCAT 22965 31 100.0 37 ............................... GTTGATCAATATGGCTCGGCTGCGGAAATAGTGGATG 22897 31 100.0 35 ............................... AGGCACGAAGGCGCCCGGCGTAGCCTCGCGCTCAA 22831 31 100.0 35 ............................... TGGTCTGCGTACCCGAACAAGAAGGGCCGGCAAGA 22765 31 93.5 34 ..........GC................... AACGGCCCGTTGATGATTCGGCACGTGGCGCAGG 22700 31 90.3 0 .............A.A.....A......... | ========== ====== ====== ====== =============================== ===================================== ================== 46 31 99.6 35 GTCGCGCCCTCACGGGCGCGTGGATTGAAAC # Left flank : AAATGACGCGACTCAAGCCCCATGATGATTCTTGTCAGCTACGACGTCAGCACCAGTTCTCCCGGCGGCGAGAAGCGCCTGCGCAAGGTCGCCAAAGCCTGCCGTGACCGTGGCCAGCGCGTGCAATTCTCGGTCTTCGAGATCGAAGTCGAGCCTGCCCAATGGACTGAATTACGGCAGCAGCTATGCGACCTGATCGACCCGGCCCTGGACAGCCTGCGGTTCTATCACCTTGGCGCGAAATGGGAGACCCGCGTGGAGCACATCGGCGCCAAGCCCAGCCTGAACCTCAAAGGCCCACTGATTTTTTGACGCGAACCCCAAGCGCCCCATAAAAACCGGGCAGGTTCGCAGTCTCCTCAAGCAACTGATTTGCAACAAAAAAATAAATAGACAGCGGATTCACGGGGCCGCATGACGACTTCTCGACTGCTTTTTTCAGCAAGTCCGCGCAATTGCCCGTGTTTTAGCAACGATGGCAAACACTTATGCTAAGGGGG # Right flank : ACTTTAGACTCGCCCGCCAGCCGGACGCTGACCAGGTGCAGGTTGGAGACGCTTGAGGCCTGCATGTAGCACGGATCAATACGCACGCAGATCAAAAATTGGGCTCCGTCCATCAACGCTTGAGCACCATTATTTGACGATGATCGTCTGAGGCGTGCCTGCAAGCTTCCCGTCCACCATCACCTGCGCGGTGTAGGTGCCGGCCGGCCAGCCATCGGGCTTGCTGAAGCTCAGGTTGGTGGTTTCGGCACCGGTGGTGTTCAACGTCGCGTTCTGTTCGCCGGCCACCTGGCCATCCTGGTAGGCCAGCTTCGCCGACAGGGCCACGTTGCTCGCGCTGCCGTCGGTCTTGACCGAGACGATGATGGTGTCTTTGCTGCCGACACTGGTGGCCGGCGTCACCGTCTTGTCGGCTGCGGCCTGGGTGCCGACGGCCACGCTGGAGACCGTCACTGCACTACCCGTCGCAGCGCCGCCATCGGTGCTGGCCGCTCCGGTGG # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCTCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCTCACGGGCGCGTGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.80,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //