Array 1 13502-14550 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LSKL01000323.1 Mycolicibacterium mucogenicum strain CCH12-A2 CCH12-A2_contig323, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                                	Insertion/Deletion
==========	======	======	======	=============================	===============================================	==================
     13502	    29	 100.0	    43	.............................	AGCACTGCTGATCGCCGCCACCAGTGCGGTCACCCTGTGTCAT    	
     13574	    29	 100.0	    44	.............................	GATCGCCACGCCGACGATGGCGCCGATCGCCCGGCCTGTGTCAT   	
     13647	    29	 100.0	    45	.............................	AGGCGGTCCACCCATGGCGCAGACCACAGCGATGACGGGTGTCAT  	
     13721	    29	 100.0	    44	.............................	ATTTGTCGTCGCGTCCGTGTACCCATTCGTCGAGCGCGTGTCAT   	
     13794	    29	 100.0	    43	.............................	GGCCGAGGATCGTGAAGGTGGCGACCTTTGGCAGGGGTGTCAT    	
     13866	    29	 100.0	    45	.............................	CTCGGCGTTTCCGAGGCCGCAGTACGCCAATACAAGGGGTGTCAT  	
     13940	    29	 100.0	    44	.............................	CTGGGATCGGACTGCGACGGCAACTCGACGTCGGCAGGTGTCAT   	
     14013	    29	  96.6	    44	.................T...........	CTGTACGCCGAATCCCGCTACATCGAGAGCCTTTCCGGTGTCAT   	
     14086	    29	  96.6	    46	....T........................	GGGATCAACGGAGCGGTCGTACCGGGGCCCAGATAGCCGGTGTCAT 	
     14161	    29	  96.6	    44	....................T........	GGGGATTCGCCGCCACCGACCCTATGGGCGCCGCCGTGGTGTCG   	
     14234	    29	  93.1	    42	........C.......T............	GCGAGAACCAAACCGATGCTGAGCCAGGACGTAGAGTGTTAT     	
     14305	    29	  96.6	    47	................T............	GCCATCCACGTCTGGAAGACCAGTGGCTCACCGTGGCCGGTGTCATA	
     14381	    29	  96.6	    41	G............................	CGACGAATTCATGCGGTTCATGGTCTCCGCCACCGCGTTAT      	
     14451	    29	  89.7	    42	G...................T.......T	CACAGCCCGTTGTCTTCAGTCCGAATCTTGGAGAAATTCCAT     	
     14522	    29	  86.2	     0	................T...A..TG....	|                                              	
==========	======	======	======	=============================	===============================================	==================
        15	    29	  96.8	    44	AGCCCAGCTTGGCGGGCGAAGGCCAAGAC	                                               	       

# Left flank :   TCGTCGACGACACCAGCGTGGCCGAACTCAGCGCCCGCGCCATGGAACGCACAGAGCTCCCAACCGAAGTGCAACAGAAGATCGACCGGCGCCGCGATCACGCCGCCCCAGGTGGATTACGGGCCTCCGTCGTGGCCGCCATGACCCGAGACGGCGTACCCGTAACGATCGTCGCAGCAGCGGATTTCACACGGACACACAGCCGATGCGGCCACGTCAACCCCGCAGACGACCGGTACCTGTCTAACCCCGTGCGCTGCGATGGCTGCGGAGCCATGTACGACCAAGACCGCTCCTTTGTCACACTGATGCTGCGAGCGGCCACTGCACCATCCAATCCCTAGACAGCCCTCGCAACCGCCCTTGATCAGCACCTATGCTGCCAACATTGACAACTCCACAGCGGAAAACACAACTCTCGACACGATCAGCCACAACAGCGCTCGCAACCAACCACATCGCCGCACGTCAGAAAGCCAAACAGAGCGAAACGGTGTCGC
# Right flank :  CGGGACGACGTGTCGTGAAATGCGGTTCGTTCCGGTCACCGTGATGACAGCTTAACCGGAGGGTTTGTCGTCCTGGACGCCCCGTTCGAAGGTTTGGGCCGTATCGGTGCCATCCGGGGTGTCGCGGAACCAATCAGTGACGATGGTTGTGGTCAGGTCTCGGTGCTCGATAACGCGTCGGCGTACGAGCTGGAATCCGTTGTTGGAGAGCCATTGCGCGGGCGGGTCGGCGTGTACTGCGACGCGTCGGTATCGGGATTCGCCGCATAGTCGTACGCGAACGCCCAGCACGGGTTTGGAGGTGCGGTGCGATCGCAGATTGACCGTTTTTGTCCAGGTGAGGAACGTGTCACCGAAGGTGTGCCGTTGCTGGGGATCGGTTTCTTTACCGCGGAGGCGGGCCGCTTCGAGCATGTTGGCGGTCGCGCCGGCGTCGATGGCGTAGCGGATGCATTGCTCGGCGAGGTCCTGGCGCTCGGTGACCGGCTGGCCGGCATCTG

# Questionable array : NO	 Score: 2.86
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.76,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     AGCCCAGCTTGGCGGGCGAAGGCCAAGAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [7,2] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-4.50,-3.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-12] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [40.0-41.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [1.15,0   Confidence: HIGH] 

# Array family : NA
//