Array 1 11300-11616 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKSP01000002.1 Acinetobacter ursingii strain TUM15406 sequence002, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ================================== ================== 11300 26 100.0 34 .......................... TATCGCAAAGGAGATGCATCAAGTAAGTATTGGT 11360 26 100.0 34 .......................... TTCCCATTGCGCCCCTGCAATAGAATAGAAACGT 11420 26 100.0 25 .......................... GCCTGATGATGAAGCAGGTTTTGGT Deletion [11471] 11471 26 100.0 34 .......................... AGTTCAAACGATCTTTGAACCCAAATACACAGGT 11531 26 96.2 34 ..................T....... CCGATTTTTGGCAATAAAAAAGCACCCGAAGGGC 11591 26 76.9 0 .................AT...TTTT | ========== ====== ====== ====== ========================== ================================== ================== 6 26 95.5 32 TTCCTATCGCATAGATAGCTTAGAAA # Left flank : TAAAAATTCAGCTTTTTCACTTGGTAAAAGTTTTGCATCCAGAATCTCGGCATCTGCGGCCCATTCTAAAGAAAGCGTTTGTAAAACTAGCGCAGAGCTTTCTGCAAAATAATCTTCGGTTCCCTGACCTAAATGAGCATCGTATTGACGTAATGCAGTCACTCCAAAACGAATAAAATCACGAATTGTTGTTAAGTTTTCTGCGGCTTCCTGTAATTGTTCAGGATTAATGGTCGGTCGCTCCACTCAGGGGTCTCCAAAAGATGATGATGCAAAACGGCTTATGATACCTTGTTTTGTCTTGCTTTTTAATGCCTAAAGCGAGTGGATTCAATTTTAAATCAAGTTGACTTATTGCTCTTTTTAAATCAATATTTTTCTTACTCTTTAATAATATAATAAAATCATACGCTTATACTTTAACTTGTTTTTAAAGCATAATATCAAATTATTAAAATAACTTATTGTTATTAAATTATTTATTAATAAGAGTTTATAGT # Right flank : TCGAGACTCCAAACATTTTGTTTTTAATTGCTGCATCGCTAAAGGATCCATCGGTGCAGTCATCATGGCCCGATAAGCCAAACATTCCTGCGTTTCTTCTGTTGCTTGAGATTTGGCATTCAAGCTATGACATCCCATCAGTCCCAAAGAGAAAATACATCCTAAAATAAATTTGATGAACATTGGATTTTCTATAAATCAGTATTTGCCGATATCAACTCCAATTTTAAAACGCAAAATAGCAAATAGAAACCATTGAATAGACTTGTTTCATAAACCCCTTTCATTTTGCCTATGCGAGAAAAATAAAGAGGGTTTAAACAATGATGAAAGACGTCATAGTGTATAGATCTTTTAAAATTCGCTTATTTTCTTAAAATCTTCTGCCAATATATAAGCATTTTAAAAAGATGAGCTTAATAAAATGACAAATCCAGATATTCAAAAGGTAGAACTCGAAAAAGCCTATCGTTTACTTAATCATGGCCCTACTGTACTGG # Questionable array : NO Score: 5.96 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:-0.07, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCCTATCGCATAGATAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: F [matched TTCCTATCGCATAGATAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [91.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 46209-51517 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKSP01000010.1 Acinetobacter ursingii strain TUM15406 sequence010, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 46209 28 100.0 32 ............................ ATGCGCTGAGAACGTGCCAACGGCGATACAAA 46269 28 100.0 32 ............................ TGCAAGTCAATAGCAACTTGTGTGTAATGATC 46329 28 100.0 32 ............................ AATGGTTAATGAAAATAAAATCACGGCGGCGT 46389 28 100.0 32 ............................ TGGCACTTGTGTTTTTCGAGTAGCCATAAAAA 46449 28 100.0 32 ............................ ATTAACATCTGCATGACCATAATTCTCTAAGC 46509 28 100.0 32 ............................ AATGCAGCTTTAGACAATGAAGCCGCAATTCA 46569 28 100.0 32 ............................ AATGGAAGGAAAAATATTGGGATGAAAATCGC 46629 28 100.0 32 ............................ GCCCTTAGACTCAACAATCTCAACAGACTCAA 46689 28 100.0 32 ............................ AGAACGCAATGCCAAGCCAAAACACCGATCTA 46749 28 100.0 32 ............................ GAACGGCTCAACAGATATTCAATCATTACTTC 46809 28 100.0 32 ............................ ATGCGCTGTGCCACGTTTGCGCCGCTTACCCA 46869 28 100.0 32 ............................ TTTTCCGCCGCTGCTGCTGCATCGGCTTCTGG 46929 28 100.0 32 ............................ TTGAGTCGGACGTTGATGAATCCCACGAAAAT 46989 28 100.0 32 ............................ GTGGACGATTCCAGATGCGGGGGTTCGTACTG 47049 28 100.0 32 ............................ TAGAAAATCAAAAGGTGCGGGGCAGATCAATA 47109 28 100.0 32 ............................ GTATGGGTGTATTCAATGATTAGTGGGTGCGT 47169 28 100.0 32 ............................ ATCTCTACTTACTTCAATTATTCCATCGATTA 47229 28 100.0 32 ............................ TCAGCCATTACACTTAGATAAATGGAACGGCA 47289 28 100.0 32 ............................ ATAAAACCACAAATTTATAAATCATTTTATGA 47349 28 100.0 32 ............................ TCATCTCAAGAAGACATTGATGCTTCTTATTT 47409 28 100.0 32 ............................ AATGCGAATGCTGCGGGTTCAGGCATTGATGT 47469 28 100.0 32 ............................ GTAGTTGAGAAAAACGGAAAAACTTCACTTGC 47529 28 100.0 32 ............................ TTGAATGGGTAGAAATGCCCACTGTGTTACCG 47589 28 100.0 32 ............................ ATCAACTTAACTTCCGTGATCTGATCGTCATC 47649 28 100.0 32 ............................ TTAGTGATTGCATGTACCAAGCCAAAAAAGGC 47709 28 100.0 32 ............................ AATTAGTCAAATATTCAGTTGAAGCTCAAGAT 47769 28 100.0 32 ............................ TAAACACGTTTATAACTTGTATAAATCCACCA 47829 28 100.0 32 ............................ AGACTATCGCAGTAGCAACATATCCAAAAATA 47889 28 100.0 32 ............................ AGAACCTGGAGTCGCTGACAGAAAGTTAATCA 47949 28 100.0 32 ............................ TTGATGTGACTTACTCGGCACGTTTTAGAAAT 48009 28 100.0 32 ............................ TAAGTTATTTAGCATGATTGATCTTGGTGCTG 48069 28 100.0 32 ............................ ATGGGTGATGAAGCGAAAAAGATTGATGACGA 48129 28 100.0 32 ............................ TCCACATAACACATCTTGCACATATCAATGGG 48189 28 100.0 32 ............................ ATTTAATAAAACATCTGTTGCTATACTTTCTG 48249 28 100.0 32 ............................ CATTCTTTTTACGAATAGTTTTTAATTCATCT 48309 28 100.0 32 ............................ ATGCGCCATTGAGAAGCGTTAGGGCCTTGAAG 48369 28 100.0 32 ............................ AAGAAGAAGATCGACTGGTTTATTTGAGTAGA 48429 28 100.0 32 ............................ GAATAACCCTAAATACGCTTCATGTCTACCAT 48489 28 100.0 32 ............................ TCAAAGATAGAATCTGACAAATAAGCAATTTG 48549 28 100.0 32 ............................ CAGCGATTTAATAAATAAACTGCTGCGTACTT 48609 28 100.0 32 ............................ AAACTTTAATGCTAAAGGAGCGAGTTGTTCCT 48669 28 100.0 32 ............................ TGACCGTTTACACGCTCAGGGTTTAGCCTTCG 48729 28 100.0 32 ............................ AACCGCATCTACAACTGGAATACCTGCATTAA 48789 28 100.0 32 ............................ ACGATCAACCAATATCACACGACCACTAGCTG 48849 28 100.0 32 ............................ TTTATAATATCATTTTGGTTAGTACCACCCGA 48909 28 100.0 32 ............................ TAATGGTGAGCGTTGCCAAGCAACACTAGCTC 48969 28 100.0 32 ............................ ATGTAGCCGATGGAAATGCTGTATGAAATGAT 49029 28 100.0 32 ............................ ATAAGACATCCATTCAGTATCCTCCAAGTGAT 49089 28 100.0 32 ............................ ATAAATGGAAAGACTCGAAAAATGTTGAACGC 49149 28 100.0 32 ............................ TCATATCGGTTCACACACTGGATGAATTGCTA 49209 28 100.0 32 ............................ ACACAAAAGAGCAAATTATTAACGCTTTAAAT 49269 28 100.0 32 ............................ CAAGGCTTATCAACAGGACTACACAAAATAAA 49329 28 100.0 32 ............................ ACCAGGAGGACGCAAAAAAACCGACTGGAACG 49389 28 100.0 32 ............................ TGTTAAATCGACCAAGTCAGGTCTCATTCGTA 49449 28 100.0 32 ............................ ATTTGCCAAAATTCTCCATTTGTAGGTATTGC 49509 28 100.0 32 ............................ AAACAAGTCAGGAAAATAAAATGACATTACAT 49569 28 100.0 32 ............................ AGAATCGTGACCGTTTCCGCGGGCGTTTTTCA 49629 28 100.0 32 ............................ ATCACGTACGAACTGCACACCGCGAAGTGAAG 49689 28 100.0 32 ............................ AGTAACGGTTTAAACGCTGAAACAGTATTCAA 49749 28 100.0 32 ............................ AGACGCATTACTTGTAACACCAGATGAGTTAA 49809 28 100.0 32 ............................ GCTAAAAACACGGTAATTGACAACATTAGGGG 49869 28 96.4 32 ........T................... TCAATGAGTGAAAGTGATGCTTGATCAAATTG 49929 28 100.0 32 ............................ CAATTTTCTGGTCAAGATGCGAATGCTGTATG 49989 28 100.0 32 ............................ TTAACATGCGTTTAACGATGACAACTCCAAAC 50049 28 100.0 32 ............................ ATCACTGGTGATATCCACCAGAGAAGCATCAA 50109 28 100.0 32 ............................ CGATGCAAAACACAATAAACGCTCGTATTTAA 50169 28 100.0 32 ............................ AGTAGCATAGCCTTCTGCCATACACACAATTT 50229 28 100.0 32 ............................ AAGAGATTCATGCCGATGGTTTTAAGCCATAT 50289 28 100.0 32 ............................ ATGTGTAGGAACTTCGCTAGTTCTACACCACC 50349 28 100.0 32 ............................ TGTTTGCCCTGTCACTACACGATCAAGGGTAA 50409 28 100.0 32 ............................ GTATCGGAAAATGGGAGTGTGACATGCATAAC 50469 28 100.0 32 ............................ GGGCGCAAGAATAATGGGGTAGTTCATGAAGC 50529 28 100.0 32 ............................ TGTAGCATCGCCAGAAATTGAACCATCGGTCG 50589 28 100.0 32 ............................ TAGCCCCAGATAACTCCGTGCTGTATTGATCC 50649 28 100.0 32 ............................ CAGGACTCATTACCTGCTTATGATATTCTGGA 50709 28 100.0 32 ............................ ACGACGACCAGCCAATTCCATGTGAACAGTCT 50769 28 100.0 32 ............................ CATTTAATTGGGCCACGCTGAAACTGATACAG 50829 28 96.4 32 ....................C....... CGGTACATGTTTGGCGTGTACATATGATTAAC 50889 28 96.4 32 ....................C....... GTCAGAACGTGTAGAACCGATAAAACAATTGC 50949 28 96.4 32 ....................C....... TGCTTAAAGTTCCACTTAAAAACATTATTTTG 51009 28 96.4 32 ....................C....... CATTAAAAAACCCGCCGAAGCGGGTTTGTGTT 51069 28 96.4 32 ....................C....... AGTTTCGATTCCAGCGATCGACACTGTTTTGC 51129 28 100.0 32 ............................ AAGTGGAGTGGTTAAAGTAGATGCTGTTTTTG 51189 28 100.0 32 ............................ TTCAAATGTTGCTTCACTATCAACCCAAAAAC 51249 28 100.0 33 ............................ GATTACAAAAAAGCAAGCCGCGGAATATCTTCA 51310 28 100.0 32 ............................ GCGCATTCATTTGCAGCAGGTCTACGGATTAA 51370 28 100.0 32 ............................ AAACAATTCAAGCAAATGCAGCAGTTTAATCC 51430 28 100.0 32 ............................ TTTGGGTGATATGTTGTGGCATATACTGAAAG 51490 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 89 28 99.8 32 GTTCATGGCGACATACGCCATTTAGAAA # Left flank : TGGAGCAACTGAATCTAACTCATTGGTTCGCAAGGCTGCAAGATTATGTACATGTCTTATCCGCCCGTAAAGTTCCTGAGGATAAGATCAACGGCTATGCTGCTTATTTTAAAGTTAATCCAAAATTGACGGTTGAGCAGCGTGTTGTTCATCAGGCAGAACGCCGTGGAATTTCAATTGAAGAGGCACAGGAACACTTTAAAGCATTAGATCTAACGGAGACTTTTGAACCTTATATCAATATGAAAAGCCAAACCAATGATATGAGCTTCCGTTTGATTATTGGAAAAAGACGTGTTGATGAAGCAAATATTGGAAAATTTGGAAGCTATGGATTAAGTCGTACATCTACGGTACCTGAGTTTTAACCCAATATTTTTTACACTCTTTAACAGCTTAATAAAATCAATAAGTTATAACTTTGCTTTAAAACTTTGGGTATTTCATACTTTTTAGGGATAAAGCACTGTTATAACTTTATTTTTTGCTTTATTCTTACT # Right flank : ATGCAAACGATGTGTAAAAGCTTAAGCTGATTGATTCACGAGAGTAGAATATGGAATCTAATCGCCCGTAAAAATGAGTTAAAAAGAAATAATATAAACAAAAACGCACTGCTTCTGGCGAAACAGTGCGTTAGGTTAATAAGATTATGCTGGTAAATCGAACCAGATCATTTCACTATCTTCAAGTGCATGAATCGTAGTTTTCTCATCAAACAATAAAGCATCACCTGCTTTAACAATTTGATTCTCAATCATAATTTGACCTTTAATCACATGCACATAATTGTGTTTTTGAGTTGCAGCAATCTCAAGTGTTTTACCAGCTTCTAACACAGCCGCTTTCACTTCTGCATTTTGGCGAATATGCATAGCAGCATTATCATTTGGTCCTGCAATCAAGTGCCATTGGTTTGGCTGTTCACTTGGATCAAGTTTGATTTGTTGATACGTTGGTTCAGCATCGCGTACATTTGGATGAATCCAGATTTGAAATAGATGCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGACATACGCCATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCATGGCGACATACGCCATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.70,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //