Array 1 167808-165075 **** Predicted by CRISPRDetect 2.4 *** >NZ_SDSK01000001.1 Acinetobacter baumannii strain IHIT38008 NODE_1_length_669059_cov_51.627016, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 167807 30 93.3 30 ............................AG TCGGCACAGGTAGCAGTTGAGCAGTCATCG 167747 30 96.7 30 ............................A. CAGAATTTTGTTTACAAGTTCTAAGCGGGA 167687 30 93.3 30 ............................AG TTTGAACATCTAATAATTGAGCTGTAATAC 167627 30 93.3 30 ............................GC CTCCAATTGATCCAATTGATCAACCTCCAT 167567 30 96.7 30 ............................A. ATGGTGGTTGTTATAAACCGCCTAATGATA 167507 30 96.7 30 ............................A. TAGAAGACGTGGACTCCCCCAACCTTTCAA 167447 30 100.0 30 .............................. TGCGCTCTTGCGGTTATTATCAAAGACCTC 167387 30 93.3 30 ............................AG CATGTGCTAAATCAGGGAAAAGAAAAGCCA 167327 30 96.7 30 .............................A ATTATAATCGCAATAGCTTCAATACTCCTA 167267 30 93.3 30 ............................AG TGCGTGAACATTATTCTTTCTGCATCAGCT 167207 30 93.3 30 ............................CG GTACGTTCAACGGTCAGCAGATTTGTGTTA 167147 30 96.7 30 ............................A. TAATAGTAATCGTAGTGGCGGTGTGTCAAT 167087 30 100.0 30 .............................. AACTTGCTTACGGCCAACACCTGTAATCAA 167027 30 93.3 30 ............................AG CCAACTTAATAGTAGAAAGGTAATGCCCTT 166967 30 96.7 30 .............................A CCAAACCAATCAGCAATGGAAAAACCACCG 166907 30 96.7 30 .............................A TAAAACGCGCAAAAAAATATAAGGGACGTA 166847 30 100.0 30 .............................. AAACTGATTTACAAGCTTGATCAGTAGGCC 166787 30 96.7 30 ............................A. CATGAAGCTTATTAAATGACTGACATGGCT 166727 30 93.3 30 ............................AA AGATTCTAGCCCCCTCAATTGAGAAGTTAT 166667 30 96.7 30 .............................A TTTAGAAAGCTTGGAAAATAAAGGTGACTG 166607 30 100.0 31 .............................. TGCCGATGCGTGCAAACATTTGCTCCGCTTC 166546 30 100.0 30 .............................. ATAGATGGCTTTAACTGACTCCCAGCCCAT 166486 30 96.7 30 .............................A TAAGAAAAATGCAAAAAAGGCATTTATTAG 166426 30 96.7 30 ............................A. ACACATGTTTTTCTAATAAGAATAAGACAA 166366 30 100.0 31 .............................. ACCAGATAGCAACTCTCTAGGTCAGATAGAC 166305 30 93.3 30 ............................CC AGACTTGATTTTTATCACCATTGAAGAGTT 166245 30 96.7 30 .............................C AGGTAATAAAAAACCGCCCGAAGGCGGTAT 166185 30 96.7 30 .............................C AAAACGTATGGGTTATTGATGCTCAAGATT 166125 30 96.7 30 .............................C GTTGCTACGCGCCACGGCGCACCCATCGTT 166065 30 100.0 30 .............................. GAATCGGCCGCTTTGCGTATAAACACCACC 166005 30 96.7 30 .............................A AAATCACATCAGGGAAGTGAAGGCGAGCTA 165945 30 93.3 30 ............................GA GAATGATTTAAATTGCATTAAGCCTTTAAA 165885 30 96.7 30 .............................G GAAGTCATGAATGTAGGTGTTGAGGATGGC 165825 30 93.3 30 ............................AA TAGAATTAAAACCACGTTGATAATATAGGT 165765 30 93.3 30 ............................GA ATTGCACTTGCTAAGCCAATAATGCCAACT 165705 30 93.3 30 ............................GA CCCATAAATCAAACAAGCCAACATAATTGA 165645 30 100.0 30 .............................. CCTCAACTGACATTTCCAAATAGTAGAGGC 165585 30 96.7 30 ............................A. AAAGCGCACAACCCATTGATTTGTATTTTT 165525 30 93.3 30 ............................AG CAAATAGATCAACTGGTGCGCCCTGTGAAT 165465 30 93.3 30 ............................GA GATTCAAGTTTCACCGGATGGCACAAGTAA 165405 30 96.7 31 ............................G. AAAAAAGAGCATTTCCAGCAAAAATTGACGA 165344 30 100.0 30 .............................. TAAAGCTAAATGAGGGTTAAACCTAAGAAA 165284 30 90.0 30 .......T....................AA CGTGAACAATTGTTTTAGCTTTGAACATTA 165224 30 90.0 30 .............C...T..........G. TACTGGGTTGCGGAATATATTCGCAATTAT 165164 30 86.7 30 A......A.........T..........A. TTTGATCTTTACTTATTCTCGCTTCAAACA 165104 30 73.3 0 .......A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 46 30 95.2 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAACAATAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTAAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGTAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAGCCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAACC # Questionable array : NO Score: 5.27 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.25, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //