Array 1 1657999-1658287 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP010520.1 Clostridium botulinum strain NCTC 8266 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =================================== ================== 1657999 30 100.0 34 .............................. TCATCACATACGTTAAATATATTTTTAACTACCT 1658063 30 100.0 35 .............................. ACTTTAGTTCTAAATGTTTCGCTTGTTTTGTAGAA 1658128 30 100.0 35 .............................. GCTAATGAGATTCCAAGAGTTAACGATACATCTAA 1658193 30 100.0 35 .............................. ACTTATTTGTATGCCTTTATTTGGGATTGTAGATT 1658258 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== =================================== ================== 5 30 100.0 35 GATTAACCTTAACATGGGATGTATTTAAAT # Left flank : GTCGGTAGAGCACATGACTTTTAATCATGGTGTCCCGGGTTCGATTCCCGGGTGAGCCACCAAAATATTGTCCAAAGTAGAAATGTGAGTTTTTACTTTGGATTTTTTTTATTTTAGAAGAATAAAATAAAATACAATATTGATTAGATATTTTAGATAATAAAACAATAGCAATAAAAATGGGATTAACAGAAGAAATAGATGCTCTTAGAAAAAAGAAGGTAATTAGTATTTTTTAGAAACACTTAGAATTTAATTATCTTAGTTTTTTTTCTGTACAATTCTATTAAAGTGTATAATTTAAATAGAATAGTAAATATTCTATTTTACCAGCCATAAATTTATATAAAATCCCTTAATCCATTGAAATTACTGGGCTAAGGTTGCCATTGAAAATTTTTATTGAAATTTCACAAACGGTTGGTAAAGTTTCCTTGAAACCTTGAAGTTTCAATGCCTTAGTGGTATTATTGATTTAAGAGAATGGCTATTTTACTGTG # Right flank : TAGAGCATTAGATAGTATTTTTATTGCCTTTGGAGAAGGCTTAACATTAAAACATCCTTATAGCTATAACTTAGTTTTGTAGCTATAAGGATGTTTTTTTACTCTTAATAATGTAACAAAATATGTTATACTTGAAAAAAACAAATTGTAATTTGCATGGGAGAATACAAAAATGAGCAAATTGACTAAATATATTGAAGATTTAAGAAAAAAGTATGGGGATGCAATAGTAACAAAAGAAAGTCATTATGATGATATGATGCTTTTAAAGGTACCTGAGCCATTGAGGGAATTTTATAGGGAATATGAAAGTTTAGAAATGCCTTTTGGAATTATTGACTCTATCGAAATCAGTATAAGATCTTCAGAAGCAGAACCCTTTAAAAGTGAAGGCTGGTTTTCATTTGGTGCAGATAGATATTTTTCCTTCTGGCTATGTGCTTATAAGGAAGATAATTATGGTAATTCCATTATTTCATGGGATCACGATATAGATGATG # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAACCTTAACATGGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 2 1744755-1745511 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP010520.1 Clostridium botulinum strain NCTC 8266 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1744755 30 93.3 36 ................AT............ GTGGCAACTCTTCCTCAATATTTGTTTTTGCTTCGA 1744821 30 93.3 36 ................AT............ TGTTGATTGATTTAGCGGACGAGTTGGGGGACGATA 1744887 30 100.0 37 .............................. GCAGCGTGTGCTGGAATACTTAATGTAGCTGGAACAG 1744954 30 100.0 36 .............................. TATAGAAGCTTTTAAAAATTCTACTAGTAAAGCTGT 1745020 30 100.0 35 .............................. GAAGGTTTTAAATTATTTTCAAGTGCTTTACGATT 1745085 30 100.0 36 .............................. TCAAACACTTGGAGTTTTTACAGATACTATAATAAT 1745151 30 100.0 37 .............................. TAAAGTTACTTCTTGTAAATTTAAGCAACATAAATAC 1745218 30 100.0 36 .............................. ACAAGTCTATAAAGTAATAATTCTTTTGGTTTTCCT 1745284 30 100.0 36 .............................. TCATATTGATTAATTCATTCCTGCTATACCCTGTTT 1745350 30 100.0 35 .............................. TCTATAAAAGTTTCAAATTTAGACTCTATACCTCT 1745415 30 100.0 37 .............................. ATCCTAAGTATAGTAGTATAGTCCCCTCTCTAAACAG 1745482 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 12 30 98.9 36 GATTAACATTAACATGGGATGTATTTAAAT # Left flank : AGACAGTGCAGAAGATATATTTAATAAAGTTAATGATTATATTTTAGACGGAATGCCATGCGATAGAGTAAATGAAATTATAAATAGCAATGAAAATTGTGTGAAATGGACTAGAAGAATTTGTGTACATAAAGAAATTTGGGATAAAGAAAGTGGAGATGTAGAGTACTTTTATTTCCTAAGGAGTTTATGGATTAAAGCTTTTGTAAATGAAATAAATACTGAATTTGATTATTTAGAAGACAGTAAAGGGGTAAAATCTATAAGAAGAAAATAAAGATTTTTATAAAAATATACATTTGTAATTTAAGACAAGCTTTATTATTTTACCAGGCAATTATTTTAATGAAATCCTATTAAACCTAGATAAATACAAGGATTATATATAATAGAATAGGTTGTTATCAATATTATAAAATCACTTGGTAAAATAGTAATAATATGTTACTATTACTGTATTAGAGCGATTTTATTATTTTAAGAATGGCTTATTTTCAATG # Right flank : TCCATAATATACTGGTGTTGTTATGAAGAATAAGCCTAACCTAAATTTTAGATTGGGCTAAATATTACTAAATAGAATAAAACATTAATTAAAAATATTTTTATCAAACATTTCTATAAAATTACATGAAATATTTGATAGAGGTTTATTTTTAGGCCATATTAATCTTAGATATGACTCAATTGATGGTTCTATTATCTTTTTTATCTTTAGATTAACATTGGGTAAGATATTAGAAGCAGTAAGTGGTAAAATAGAAATTCCAATTCCAGCTTCAGCCCAACTTAAAGAGGTAATAATATCATCATTCTTACATATTATATGTGGTTCAAAGCCTGCCTTATTACAAGCATTTTTTATAACATCATCGTATCTTCTATTAATTATTAATGGCTTATCTTTTAATTCGTTAATGAGAATAGTGTTACTTTCTATAGAATTATAGAATTTAGATTTTGCAATTGTAACAAAATAGTCATTTAAATTATTTTCAAGGTTAT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAACATTAACATGGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-0.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [76.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA //