Array 1 3258-722 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCKZ010000022.1 Phocaeicola vulgatus strain DFI.4.20 MLPCDHDE_22, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 3257 33 97.0 31 ................................T TGTTAAGGTAAACACCCTCTGACTTCCCATT 3193 33 97.0 31 ................................T TATAGATAAGCTGAATGCCCCACGCTATAGG 3129 33 100.0 32 ................................. AGCGTTGGTTTCCTGCCAACACCACCAGTTTA 3064 33 97.0 32 ................................T ATGATGAACGCTGAACAAAACGCTGCTCTTAC 2999 33 97.0 33 ................................G CTTATTCCGGTATCCGAATATAGTTGCGCAGAT 2933 33 97.0 33 ................................T CGTCTGCTTGCAATGACGATAGTACTTCGATTA 2867 33 97.0 33 ................................T CTCTTTCTTGTCTATAAACGCACAACTCACACT 2801 33 97.0 33 ................................C TCTCTTGCTACAGCTGTTTTGCAATCTGCTGGA 2735 33 97.0 32 ................................T TCAGCAATTGGCTAGTGAGAAGTCTGAACTTA 2670 33 97.0 33 ................................T CTCTGGGATTTGAAAAATACTAATATTCTTAAG 2604 33 100.0 33 ................................. TTTTACGATAACTAGTGCTCATCGTACTCCCGA 2538 33 97.0 32 ................................T CTAATACGATACAATATAATGTATGTGCGTAT 2473 33 97.0 31 ................................T TTAAAGTAAAATATTATAACTTTGTCTAAAA 2409 33 100.0 33 ................................. TTGGTATGGTTGTAGTATATCACGTTTTTAAAG 2343 33 100.0 32 ................................. ATTGTCCATTGTATAGCATGTTGTGCAGCCTG 2278 33 97.0 34 ................................T TTGTCGCTGTTTTTAATGTGGTAAAAGCCATTTT 2211 33 97.0 33 ................................G CTTCGTGGCTTGTAATTTGCCCGCCAATCGTTT 2145 33 97.0 34 ................................T TTTCTTGAGTATCTGTTATGCTCTAATGTTCATT 2078 33 100.0 33 ................................. TTTGGTGATCGTAATCGTCATCAGGTGATTGAT 2012 33 100.0 33 ................................. TAGATATTCGGATAATGTCCATGTGTTTGATCA 1946 33 100.0 32 ................................. AGGCACTGTGTCGTATGACCGTGAAATTAAGG 1881 33 100.0 33 ................................. ACTGCGTTACGCGAATTATCCGAAAGATTACTT 1815 33 100.0 33 ................................. CTCATTATAAAATTATTATTTACCAACACAAAA 1749 33 97.0 32 ................................T ATATACTTCATAAGGATGCTAACCCGTTTATC 1684 33 97.0 32 ................................C GTTACCAAAGATGGCTGCAATCACAATCAATG 1619 33 100.0 33 ................................. CTGAACGCTTAGTTTTATGAATGAGAGAAGAAA 1553 33 97.0 34 ................................C TTCTCCACAGGGTAGGGAACCTCTACCTTTTTCT 1486 33 97.0 36 ................................T CGGCCATAGCAATGGCAAGATAATCATATACCAGTG 1417 33 97.0 33 ................................T TTGTTCGGCGCCGTTTTTGCCCACGAGGCAAAA 1351 33 100.0 33 ................................. TGCTTATCAAGCTGTGGCGGAACGTGGAATGAA 1285 33 97.0 34 ................................C CGACGTGGTAGATGAGCCTTTTTTAGCAAGCAAA 1218 33 100.0 32 ................................. TTCTTTAGAACAAGACTTTGAATATCATCATA 1153 33 100.0 34 ................................. AGCTGATGTTGCTTTTGTTTGGTGACAGAAGCAA 1086 33 97.0 34 ................................C ACCATACAACAGCCAGCAAGCGACAGAAATCAAA 1019 33 100.0 32 ................................. TAGCAGATCCCATCCCTTATAGATATCCTCCA 954 33 100.0 33 ................................. CTTATAGAGATTTGACAAACAGATATAGGGTAT 888 33 97.0 33 ................................C GTCTGTCTGTGGAGATACACCCGGATGCGGAAT 822 33 100.0 33 ................................. CGCAATCCACCACTATCATAGCTCGGATGAACT 756 33 93.9 0 ....................A.........G.. | TA [733] ========== ====== ====== ====== ================================= ==================================== ================== 39 33 98.2 33 GTCACACCCTGCGTGGGTGTGTGGATTGAAACA # Left flank : ATATTGACGATTATCCGGTATTTCTTATAAAATGATTTTTAATTATGTACATTCTTGTGACTTACGATGTGGATACTACAAGCAAAGAGGGGGCTCGCCGTTTACGATGTGTGGCCAAGGCTTGTCTGGATTATGGACAGAGGGTGCAGAACTCAGTCTTTGAGTGTGTAGTGACGGAAGCGCAATATTCTCTTCTAAAAGGGAGAGTTAGGGATATTATTGATATGTCTCTTGATAGTGTTCGTTTTTATATTCTTAGTAAAAATGAGAATAAGAGGGTGGAAGTAATAGGTGTTGAAACGGCGTATAAACTTGAGGAGGCTCTTATAATATAATGCGAATGTGGTGTGTTACAAAAAAAGTAGTATCTTCGCATGTGTTAATAATCAGTAGATTAAATTATTTGTAGGGTATTTCTTTGTTATGAAGTTGAATAATAATGATGATTCGCATAACAGTGGATTAAATTTGCTGATTTATAATATGTTATTAGATATAGA # Right flank : TTGTTCACTCGTTGGTCAAGTTTATGGAAGAATTGTAAGCATTCGGCCTCTTGTGTATTTCTCTTCAAGCTGTTATAAAGTCAAAAGCCAAACGAAGTACGTTAGGCTTTTGACTTTGTTATGACTGGAAAAAACACGCACAATCCCGGATGCTTATCTTTTGTCTGTCTTCTTTTGTGGTTTCACCTAGGTGACAATACATTGGCATCTAAGTGGAGAGGCGTAGTCACCCAAGTGATACGCTTGCTTCACCTTGGTGAAACTATAAATTCAACTAAGTGTTTCAAAGCAAATATATTATATTTTTATTATACTATCCCTTGTCGTTTATTTGTTATATTGTTGGTTATTAATGTATTATTATCTGTTTGTATCGATTGTTTTTTCTTGTCTTTATAAGATATATTAAAACATAAACTAACATGAAAATTGGTATAATTGACCTTTGTAAACAAATAGAAGATCCTAGTATGAACCGCAAGAAAGTCCATAAAATGGAA # Questionable array : NO Score: 5.74 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.57, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACACCCTGCGTGGGTGTGTGGATTGAAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTGCGTGGGTGCGTGGATTGAAACA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.70,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //