Array 1 5395-4632 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAIJZQ010000005.1 Streptococcus sp. 2018037 Scaffold5, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	====================================	===============================	==================
      5394	    36	 100.0	    30	....................................	AAATGCTATCATAGTATTAACCTAAACGAA 	
      5328	    36	 100.0	    30	....................................	ATAGAAACTTTAAAATCCGAGCTTGGTACG 	
      5262	    36	 100.0	    30	....................................	GGACGAGAGGTATTTTACAAAATTGTCAGA 	
      5196	    36	 100.0	    30	....................................	GTAGCTGTGCTAGTTAATCCGATGACCTAC 	
      5130	    36	 100.0	    31	....................................	AAAACATTTACAAGTATTTATTCGGTGTTAA	
      5063	    36	 100.0	    30	....................................	CCAATTGAGCCAAAAGCACAGTCACGTCCT 	
      4997	    36	 100.0	    30	....................................	CTATCACAGTTGACGTAGGCATACTGTGCT 	
      4931	    36	 100.0	    30	....................................	TCTACTTTAGCGGAGTGATAGACGCTATTG 	
      4865	    36	 100.0	    30	....................................	TAAAATTGGACCACATCTCACGACCAGTCT 	
      4799	    36	 100.0	    30	....................................	ATTGTTTCATTTTTTGTTTACCTCCTAGAC 	
      4733	    36	 100.0	    30	....................................	TGCCGGTGCATGGTAATGTATTAAAGTTAT 	
      4667	    35	  88.9	     0	.........................A..A-.....G	|                              	T [4634]
==========	======	======	======	====================================	===============================	==================
        12	    36	  99.1	    30	GTTTTAGAGCTGTGCTGTTTCGAATGGTTTCAAAAC	                               	       

# Left flank :   GAAAAAACAGAAGTGAAATCAATTATTGAAAAATTAGCAAATTCTATTACTGAACTAATCTCTTATGAATGTTTAGAGAATGAGCTTGATTTGGAGTATGATGAGATTACGGTTTTGGAGTTGATAAAGGCGTTAGGGGTCAAAATTGAAACTATCAGTGATACGATTTTTGATAAAATTTTCGAGATTTTACAAGTTTATCAATTTTTGAATAAGAAGAGATTTCTTGTCTTTATCAATGTGTTATCTTATTTGACAGTGGATGAAATTCAGAAAACTAGGGAGTATATTGAACTTTCCAATATGGATGTTCTTTTTCTAGAACCGAGAAAAAGAAAAGATTTCCCTCAGTATGTTTTGGATAAAGACTATTTCTTACTATCGGAAAATATGGTAAAATAAATACATACAGTACAAATATTAGAAATTATTCGAAACTGAAGTCTGGCTGAGACGAATGGCGCGATTACGAGATTTTGTGACAAAAAATAGTCTACGAG
# Right flank :  CAGTAAGTTTATAAAGGAGGGGAGTAATTGGATGTCAAAACTGTTATTTTTTAATACTTCTATTTCTAACAGTAGTAGTGAATATTGTAACTTTAATTATCAAAAAAATCACTAAAGAGATCGAAAGAAATAAGTGGGGATGAAATTGATAAAGAGCTTAATTTGATAGGTCTTCCTGATTAAATTCTACTTTATATCACTGTTTTAATTTTTTCTAGTTTTTACGATAGCCTAGAAAATACTGTCGAAATTAATTCCCCTCCATTTTCCTCCAAGATTTCTAACTCGCCCTTGTCCCATCTCCCTCTCCATGCTATACTATATATAATCGTTTTACTTCAAAGGAGACAAAGATGACAAACCTAAAAGAGCAGGTTGGGATTAAGGCGGCGGAATTTGTGACGGACGGGATGATTGTTGGGCTGGGAACTGGTTCGACGGCATACTATTTCGTGCAGGAGATTGGCCGCCGGGTTGCAGAAGAAGGGCTACAGATCACA

# Questionable array : NO	 Score: 6.21
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTGTGCTGTTTCGAATGGTTTCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:61.11%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 98% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-0.20,-2.80] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [5-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [70.0-56.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.27,5.28   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
//