Array 1 1182764-1181107 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABKBA010000009.1 Vibrio parahaemolyticus strain CGVP8 P8_DENOVO_Contig_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 1182763 28 100.0 32 ............................ GTCATCAAAATTTATCGATAAATTAAAAGAGT 1182703 28 100.0 32 ............................ TTAGCCTTAGCTTTAGCCTCTTGCTTGGCCTT 1182643 28 100.0 33 ............................ GATGAGGAAATGGCTGAGTTAGCTCGAAACCTT 1182582 28 100.0 32 ............................ GTCACAAGGGTGATTTCCACTCCTTGCTGATC 1182522 28 100.0 33 ............................ ATCCGTCTAACGCTTCATCAAATGGGTGGTATT 1182461 28 100.0 32 ............................ TTTTTTATTGGATTGAAGTTATGACATACCCA 1182401 28 100.0 32 ............................ TCGTTGCGTGTGCCTGGTGTTTATAAGGTGCA 1182341 28 100.0 32 ............................ GTCAAAACGCGATTGTGATGCAAAACCTCGAC 1182281 28 100.0 33 ............................ TATGACAGCTCAATGAGTCTAGCTAAGAAGTTT 1182220 28 100.0 32 ............................ CGTCAAGGCTGGTACTCAAACAGAAGCGAAAG 1182160 28 100.0 33 ............................ ATACCGCAATATTCACATAAACGAAAGAAATCT 1182099 28 100.0 32 ............................ TGGCAGCCTGATAAGAATTGGGCTTCTGGTGT 1182039 28 100.0 33 ............................ CAAAGAAAACCGAACTAAAGCTAGCTGCTTCGC 1181978 28 100.0 32 ............................ TCGGCGTTGACGCCTGCATTGCAGAAGTTGTT 1181918 28 100.0 32 ............................ AACTAGCGCGCTACGCTTACTCAAATCAAAAA 1181858 28 100.0 33 ............................ TGAGTTTCTGTTAATGAGCAAGAAACCTCCCTT 1181797 28 100.0 33 ............................ AATAGATCGTCGCCGCTGAATTGTGCTAGGTCT 1181736 28 100.0 32 ............................ AATAAACCCTGCCAGTGAGTCTGAGAGAGGCT 1181676 28 100.0 32 ............................ TTTGCCTTGTGGCAAGTGCATTGGTTGTAAAA 1181616 28 100.0 32 ............................ TTTGCGCTTCTTCTATGTACCAACTAGGTTTT 1181556 28 100.0 32 ............................ TTAGACAGATTGTAAACCTTGTAGAAGTCATC 1181496 28 100.0 32 ............................ TGCTGCCAACAGACTGGCTCGTCGTAACCTTG 1181436 28 100.0 32 ............................ TACGTAATATATATTGAAAAATGCGGTAAAGC 1181376 28 100.0 32 ............................ ATTAACTCACAGCTGCAACACCAATATTTTGA 1181316 28 100.0 34 ............................ ATCATCGATTAGCGTTGAGCGCTATGTTGATTCA 1181254 28 100.0 32 ............................ TGTCACAGCCACGAGCGCGTCCCTGGTTAACT 1181194 28 96.4 32 .............C.............. TGCCCGTTGTTGTAGCGTTGACCATGCATCTA 1181134 28 89.3 0 ..........A..C............G. | ========== ====== ====== ====== ============================ ================================== ================== 28 28 99.5 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : GAACGATGTGACTTACGTTAGCTTTACTCGGAAACAAGTCAAATCCCCTGAGCGAATTGAACGCGATATGCAGAAAAAAGCGGAGCTTTGGGCGGCTAAATCTGGCAGGTCATTACAAGAGTGTCTTGTGGAGCTGGAAAAGACTAAGCCGACCTCGCTCTGTCCATTACCGTTTATCTATTTACATAGTCAACAAACCAAACAACGTTCACCGGATAAGAGCAGCAAATTTCCGTTGTTTATTGAAATGAAAGCTATCGGAGTAAAACAAGAAGGTTATTTCGACTGCTATGGGCTGAATTCCAAACTTAATCGGCAAGATTGCTTAGGGACTGTTCCGCAATTTTAATCAATAAAGGGTAAGTTTTTACCCTTTATTTTTGCTCTTTAAAAATAGGTATAAAATACAGCTAGTTACAATAGATAGATTTTGACAAGGTAAAAACATGATTTTTATCCTATCTATCTGTTGTAACTTTCTTTTATTGATTTATTCTGTT # Right flank : GGCTGAAACGGTGTCCTCAAGTGTAAGCTTTATTCATATCGAGAGCTTTACGCTAAGTCGTAAAATTTAGATTTTATTCTCATAATATTTAGCCAAATAATTTCCTACATTAAGTTTAATAATAACCTTACTTAAAGGTATTTTTTATTTTCCATGTAGGGTAATAAATTTTTTGAAGTGTTACGAAAACCCATGATTATTCATATTTAATTTGCCAAAATTTAACAAAAAACAAAAGTCAAAAGATATGATTGCTTGGAAATAATCGGTGAATAATGCATAAATTAATATTATGTGTATTATTATTGAAATTAATGATTGAAGTGTATCGTCTCGCGATAAGGAATAAAATAGTGTTGTGTAATGTTTGTAAATTGAATTATGACAAAACTATAAGGCTAGGTAGGATAGCCATTTGTGATGAATGTTTGATTTCTGCAAGTGATTTTTATAAAGAGCATAGTCATGAAAAGTTTGAAATTATATTTCATGCAGATATG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //