Array 1 46326-44172 **** Predicted by CRISPRDetect 2.4 *** >NZ_SHSI01000016.1 Bifidobacterium longum subsp. longum strain MCC10089 contig0016, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 46325 36 100.0 28 .................................... GATTACTGAACGACTTGGGGCGCATTGT 46261 36 100.0 28 .................................... TGTACGGATATATGGCGGTTGCCGCCAC 46197 36 100.0 28 .................................... TGCAGCAGCTTATCAGTGAAGGCTACGT 46133 36 100.0 28 .................................... AGGCTTCCAGCAAGCCGTCGATCGTGGT 46069 36 100.0 28 .................................... CGCAGGCCCCCGGACCGCGCCCAGCATG 46005 36 100.0 28 .................................... GCATATTCTAATCCTATTCTATCAATAA 45941 36 100.0 28 .................................... CTTTAGTCAAACCAAAGTGTATTCTAAA 45877 36 100.0 28 .................................... AATGAGATCGTGAAGTTCAGCAACCAGT 45813 36 100.0 29 .................................... ATGATGACAATACCCTGTGTTATCCATGA 45748 36 100.0 28 .................................... ATGACAGTCTGAGCGAACTCATCACCCT 45684 36 100.0 28 .................................... ATGCCTACGTGGAGTCTAATTTTTCATG 45620 36 100.0 28 .................................... GAGGATTCGGGCAAGATCATCCAGTTCG 45556 36 100.0 28 .................................... CCACGTATGTATAATATAACCCGTGTGA 45492 36 100.0 28 .................................... GAGATGCGCGGCGGCGTCAAGCTGGACA 45428 36 100.0 29 .................................... GTGAGCTTGTCCGTGTCTTTCATCAGTGG 45363 36 100.0 28 .................................... TGTTTACGCTCAAAAAGCACATTAGATT 45299 36 100.0 28 .................................... CCGAGGCCGGTAGGGTTGCGTGTCTGGT 45235 36 100.0 28 .................................... TCTCCCAGTTGCTGCCCCTTGGCGTCGA 45171 36 100.0 28 .................................... CGTATTCATCGTGGCCTCTTCGCGGTTT 45107 36 100.0 28 .................................... CGTACATGATGGGGTCCTTGACCTTGTA 45043 36 100.0 28 .................................... TTGGTGGTGTTGGGCGTCCGGCGCAGAA 44979 36 100.0 28 .................................... AGGTCGAGCGCCTCCTGCCATCCGGCCT 44915 36 100.0 28 .................................... GTTGTTCCGGGAACAACTGGGAACAACT 44851 36 100.0 28 .................................... CTTGCCTCCGTTCTGCATCCAGCTGTCG 44787 36 100.0 29 .................................... ACGCGGCGAAGAATCTTGTTATCGCGGCT 44722 36 100.0 29 .................................... GTCGCACGTGGCATGGCATGTTGGCGAAC 44657 36 100.0 29 .................................... TGTTGAGGGGAACCGTATCAAACCTGATT 44592 36 100.0 28 .................................... TGGTTTCCGTGCCGCATTGGTCGCAGTA 44528 36 100.0 29 .................................... TCATGGGACTGTGAGCGGCGGCGGCGTGA 44463 36 100.0 28 .................................... TAGAAGTGCAGATTCCGTTCCTGCAAAC 44399 36 100.0 28 .................................... AGGACGTGCAACGCAAGTATTTCAAGAT 44335 36 100.0 28 .................................... TCGTCGATGTGTTCCAAGAGGTTTGGTG 44271 36 100.0 28 .................................... TATTGTTCGGGTGCGATGGTGATGATCA 44207 36 86.1 0 ..............................TTG.AT | ========== ====== ====== ====== ==================================== ============================= ================== 34 36 99.6 28 CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Left flank : ATTCAACGGTTCCGGTTTGACTATACCGAGCTCATTGAATGATTTTGCGCAGCAATTTGGTTTATATTGCGAAGGCAAAATCGACAGGTTGCAGGTTCCCGAATATGTAGGCGAGTCATGAAACGCGATGAGGACAGTGGCGGCATGTGGTGCTTGGTGATGTTTGATTTGCCGGTCAAGACAAAACGGCAACGGCATGCTGCAACTGTCTTTAGAAATATGTTGCTCGACATGGGATATGGAATGGTGCAGTATTCCGTATATGTGCGGTATACGCCTACGCAATCGGGTAATAGGGCGACGGTCAAAATGATTAAAGACAATCTGCCAGCTAATGGCTTAGTTAGAATTTTGCATATTAGCGATCATCAGTGGTCCACGGCGGCCCGATTTTCTTCTGGAAAACGTGAGATTGAGGAAGAAACGCCTGACTTTCTCACGCTTTTTTGAACGTAGGAGAGTCTGAAAAGATTGAAAAATAGCCCTTCTTGATAGGCTAT # Right flank : GCTGGAATGCTTGGGTTGATTTGGCTGATTTAGCTGTGATGGCCGCTGCGGGAATGGCCCTTGCGCGGTTGGCGGCAGAGGTTGCGGCGCGGATTGCGGCACTGATTGTTGTGCCAATTGCGTCTGCGGTGAAAAATATGGCGACGGCTGTGTCTGACTGTTTATCGGCGGATGTTCCGGCTCAGGTTGTGGCTGGAATGGAGAATATTGCGGTTGCGCCATTGTATGCCCCTGCCCCTTCATTGCCATTTCATTGGCGCATGGCGAGGGCTGAAAACCAAGATGATGAATCCTGCATGAGTTATCCGTGATTCCTGTGCGTTGGTACAGCGCGGAAGGTTGAGCAGCCGACATATGCAGGCTTGTCGGTTCACGCGAATATCTTTAAACCTATGACTTCCAATACCCTTCGTATGTCAACCATGTTCCTGCGCACCCTGCGCGAGGACCCCGCTGATGCCGATGTCGATTCAGCCAAGCTGCTGCAGCGCGCCGGCTAT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.30,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //