Array 1 47973-46374 **** Predicted by CRISPRDetect 2.4 *** >NZ_BNJF01000006.1 Ktedonospora formicarum strain SOSP1-1 sequence06, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 47972 37 100.0 35 ..................................... ACAGACACGCACCACACGCGCCGTCATCGAAACGA 47900 37 100.0 39 ..................................... GCCATACGTGTTCAGTACACGCAAGACGACCGAGCACTA 47824 37 100.0 40 ..................................... CTCCATAGATACCACTTCTGAGGAAGAAGCACGCGATCTC 47747 37 100.0 35 ..................................... TTGTAGATCAAGAAGGGGACGATCCTGACCTGGGA 47675 37 100.0 36 ..................................... ACGCCGGCCCGGAGCCGTACACGTCGCCACTGTAGA 47602 37 100.0 36 ..................................... TACCACCACAGACAAGTGGTGCCGCGTGCCGAACGG 47529 37 100.0 38 ..................................... TACCAGAAGATAATAGCTTCGTCCTGGTAGAGCATGAT 47454 37 100.0 36 ..................................... ACGCTAACGCGCTGACAGAAGAGCCAAAGTTGTTTG 47381 37 100.0 38 ..................................... TTTCTCGCTGCTGCGCTCGTCGTCGCCGCTCCTCCTGA 47306 37 100.0 38 ..................................... GATCATGCGCGCCAGCTCGTCAAAGTGACCAGCCAGGA 47231 37 100.0 40 ..................................... TGGCTGTCATTGACGAGTTGCGCGACCTGCACCCCGTTAG 47154 37 100.0 36 ..................................... ACGCGATCGCGAATGCGCTGCTCTTCGGCCGTATTG 47081 37 100.0 40 ..................................... CATCGTCACAGATGGGGATGATCTGGCGCGGCCAGACCGT 47004 37 100.0 38 ..................................... TTCGAGGCCAGGACCGTACGGACGAAATCCGATCTGCG 46929 37 100.0 37 ..................................... ACTCTCCAAACAAGGGATCACGAAGACCGGCACCTCA 46855 37 100.0 38 ..................................... AGCCAGTGATCCAGAAGCCCTCCCTCCCGCGTCCTGGC 46780 37 100.0 37 ..................................... AATAAGAAACCAATCGCTACAATGCTTTGAATCGCCT 46706 37 100.0 38 ..................................... CTTCTTCGCCTGCACCTTTGGCTGGCATAGGTGGCGCA 46631 37 100.0 38 ..................................... TGGAGAGGAGTACAGTCAACCAGCGCGTACAGATCGGC 46556 37 91.9 37 ....................CT...........G... GTTTTCTACGTAAAACTTGAACGTCGCATAGAAGCGC 46482 37 78.4 35 .......T.C..........GTAC.....C...G... GCATAATGCGGGTGATGGGTGTCTAGAGCTGCTCG 46410 37 83.8 0 ......A..CT...............A..C...A... | ========== ====== ====== ====== ===================================== ======================================== ================== 22 37 97.9 37 GTAGCAGGGGCTTCGATCCGACTGAGGATACTGCAAG # Left flank : CAAGCCGCAGGGTGGAACCAAAGTATTGTTTGATGCTCTCCTAAGCTTCGATCAGTGTCCGATGTAATAGAAATCCTCTCATGCCTCTGCATCCCCGCTCTACAAGCCGTTCCATACCATTCCCACCACCTCTCATAAAGCCAGGTAACAATCTCGTAGCGAAAAAGTGATCAACATCTCAACGAAAAGGAATACCTCCCCTTTTCTGGCCTTTCTTGGGTCCCATCCGAAAATCGCCTCTTTCTCTAAAACAAATAGGATACAATCAGCCCTGATAAGCCCAGATCGGCGCACGTATAGTCCCTTAAGCACTATAATCCGCAATTTCTGTTCGAAAATCCCCTGGCTTTTGGCGCAAAAAACGATTTTCGAAACCTGACGCAATCTGGTATACTAGACGAAGTAATTCAATTAAAATCGATGCTCTGAGACGTCCAGGAAACGGTCTAACCTCATTCAAAGAGGAAAACACACCGCCCACTGCAAACTGCAACTACACG # Right flank : TGGATGCGGGACGTAAAGGCATGCAGCAGGGATGCAATCAAATTGCAGCTGAAAATTCCTTATGGATCGAAATGGCTCGACAGAGAGCAACTCGATCCAGGACAGAAGTAGTCGTAGAGTATCTCTCCCAATAAAACAAAATATGGCCCACTATGGCTATTTCTAAATGATCCTAACTTGGCAAAATTTTAAATAAGCCTGATACGGTCTTTTTCAAAAACTCATGCCTTTCAATACACTTTACCTATGTGTAGCGGCATCTCCGGTTTTAGTTGATATACAAACAAAACGTTGAATGAATTCATGCATTACTCTCTAAGCGCGAATATGCTTGTAACACAAAAGCATACCAACATATAATTTCAGTATTCGCATACCGAATAAGGAGAGAAATTGCCCCCCATGCTCGTCACATAGAAAAAACTGCAAGAAAGAGAGATTTACTCATTCATGCGATTGTCTAGCGAGACCCTAAACCCTTCATTTCTTCCTGTTTCAAC # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGCAGGGGCTTCGATCCGACTGAGGATACTGCAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.80,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [17-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA // Array 2 64164-62492 **** Predicted by CRISPRDetect 2.4 *** >NZ_BNJF01000006.1 Ktedonospora formicarum strain SOSP1-1 sequence06, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 64163 37 100.0 37 ..................................... TCTTTATTTCAAAAGCTACACAGGATGCATGTGCTAT 64089 37 100.0 38 ..................................... TTGGCCCGGTGGATGTTCTACGCGATATCAAGGGGAAA 64014 37 100.0 37 ..................................... TTCCTATTGGGAAGGCGCTACCTAGTTCCACCTGTTA 63940 37 100.0 38 ..................................... AGCAACCTCAGGGGTCGTGTCCTGGAAGGTAGAGTTCG 63865 37 100.0 36 ..................................... ACTATGACCGCAAACACGACGCTATGGACTGTAAAA 63792 37 100.0 35 ..................................... GAGTGTAGAAGGCTCAGAGACTCCAATTACTCTTG 63720 37 100.0 37 ..................................... AGAATTAAAGGCACTGAGGCATTATCTGATGACGAAT 63646 37 100.0 39 ..................................... GATTAAGAAGATAACGGCGGCGCTGCCTGATGTTGGCGC 63570 37 100.0 40 ..................................... TCGCTTCAATAGGTTAAGCAATGCCAGCATCTTTCTTGAG 63493 37 100.0 37 ..................................... GCACGTATGAGCAGGTAAGTTCTATTCACCTTGAGCG 63419 37 100.0 38 ..................................... TATAAGGTGCGACCAGACGGGTCGCAATGGGAAATAAT 63344 37 100.0 35 ..................................... AGCGCGCCAGGTATCTTGTCCACTACCGCACGGGT 63272 37 100.0 38 ..................................... AGGCATAGGCGCGCGGTGGCTCTATTCCTAATTCGTCA 63197 37 100.0 37 ..................................... TATGTACGGTTAACGAGTCGCTTTACCAGTTGGTTAC 63123 37 100.0 37 ..................................... TCATATATGGGAGCATCTTCATCTGAACTAGCTGAGC 63049 37 100.0 37 ..................................... TCATAAAAGCGAGTGTTGTCAAACAGGTCTATCCATG 62975 37 100.0 37 ..................................... CTCCAAAGTGTGCAAGCATTGCCGCTGGGTTGCTGCC 62901 37 100.0 36 ..................................... TTCTTTTTGTTTGGCCTCTTCACACAATTCCATTAG 62828 37 100.0 38 ..................................... AGCTCCATATCGAAGAAGAGCACTTTCATCGAGTTGTC 62753 37 94.6 37 ....................A..G............. TGTTTGGGTCGCACCTTGAGCCGCGTTCTGGTTACGT 62679 37 91.9 39 A......G....A........................ GTCGAAGGTTGCCGCGAGGCTGTCGCGGCGGGGGTGAAT 62603 37 91.9 38 A......G...........A................. TGCATCGCGACCGCTTCAAACGCCACAGTGTCGATAGT 62528 37 81.1 0 .......G......A........G..A.C..CA.... | ========== ====== ====== ====== ===================================== ======================================== ================== 23 37 98.2 37 GTAGCAGAGGCTTCGATCCGTCTCAGGATACTGCAAG # Left flank : AGCGCAAACTAACGTATCGCTTCACGAACAATATCGCCGTGCTTAGGCAACAGTATAAAGATTGAGTTCCGCCAAACCGTCGGAAATATTTGGATAGAAAAAGAAAAAGTCAAAATTCTGAAAGCAAGGATAAAATCAGCTCGTGAATGGTGACGCCAAGCGCATCAACCTCACGTTGATATATCTCCCTCCTGACGCATTTTTAAGGCTTTAAAAAGGCGGGCTTGAAAATCGCCGCCCTATGACGGAGAAACAGGGCGTAATCAGCCCTTTTAAACTCTCGCGTGACCATGAATTGCCCTAAATATGTCTTTAAAACATACTCTACATTTCGAAAATCCCCCGGCTTTTGGAGCAAAAAACGATTTTCGAAACCCGACGCAATCTGGTATACTAGACGAAGTAATTCAAATAAAATCGATGCTCTGAGACGTCCAGGAAACGGCCTAACCTCATTCAAAGAGGAAAACACACCGCCCACGGCAAACTGCAACTACACG # Right flank : GGTTGCGGCATTCCAATCTTTATGATGCCAGCAAATATGCTAGCAGGGCATGATCCGAACTAAGGTATGGTAAGAAGCAAAAGAATAAACTGGGCCTCAACGATGAGAAATATATCCCATCGTTGAGGCCCAGTTTATATGGCTATCAGGCAATTTCAACCCTTCGTACTTCCCAAAAGTGAGTTTCATCGATGTCCTACGACGAATTTTTTGGATGTTTCTGATTCTTTTATAGGAAAATGTGATTTATAATGATAAATACAGTTTTAACATTTCATATTTCCTAAATTATTAAGAAATTTTACACCTCTACCGTAGATAATGCGACATAATTGATACAGAAGGAGGTTCAGTCATCTACTATGGTGCAGAAGCAACCACCCCCACGCTTTACGCACAAATTATTGCGGTTACAGCAAGAGCGCCAAAAGGACGAGGTGACAATTGATGAATACCAGTCTCAATTAACCTCAATCATTGAAGAGGAGATACACTCAGGC # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGCAGAGGCTTCGATCCGTCTCAGGATACTGCAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [8,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.80,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA // Array 3 67595-66739 **** Predicted by CRISPRDetect 2.4 *** >NZ_BNJF01000006.1 Ktedonospora formicarum strain SOSP1-1 sequence06, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 67594 37 100.0 37 ..................................... ATTCGTGGGCCTCCGTCTGGTCGGACTCAATTTCGAG 67520 37 100.0 39 ..................................... CGTAGTGACGACGGGGGGAGCCGGAGGCAGGACCACGGA 67444 37 100.0 35 ..................................... ATTCACTCATGAGGAGTCTCAACAAAAGACATGAG 67372 37 100.0 37 ..................................... TCTGCAATTTGTCTTTTTCGCTCTAGTGAGAGCGCAT 67298 37 100.0 36 ..................................... TTTGAATGGAGCCTGTGTGAGAGCAGAGCGGATAGA 67225 37 100.0 39 ..................................... TGATATTGGCCATAGGGCCACCAGCCGTGGGCTGGTCAT 67149 37 100.0 37 ..................................... AATCGCGCCAGCATTCCTTGTGCTCGTCTGTATGATC 67075 37 100.0 36 ..................................... ACACTCCAGAGCCAGAGGCACCTTGGGATGGGCGGC 67002 37 100.0 39 ..................................... GCTTGGTATTGCGGTAGTGATTGGGATTGCTGCTCTCGA 66926 37 100.0 39 ..................................... TTCTCGGCCTTCTGTTTGCGCCTCCCCTTCTCTGGTGGT 66850 37 100.0 38 ..................................... ACCTCCTGCCAGCCAGCAGCCCTATAGCACGCGCCCGG 66775 37 83.8 0 .....................TT.....CA...A.C. | ========== ====== ====== ====== ===================================== ======================================= ================== 12 37 98.6 38 GTAGCAGACTCTTCGATCCGCCAGAGGATCCTGTAAG # Left flank : GTATACCCTCCGCAATCCGCCAAACCGTCGGAAAAGTAGTGAGGACAATCAAATTTCAAAAAATGGCCGAAAAACTACAAAATCAAGAGAGAGGCCTCGCCTGTAAATCCCATAAAACCTTACAATACCGGAGATAGTATAGAGGAAAAATAGAAGCTCTGCTATAAAAATGACATAAAAATTTCTGATTCCCCTCTCTCATTTTGCCCTTTTGTGGGCCGTGTTCGAAAACCGTTACTGCCCAATATCTAAAGAGGGTGAAAATGGCCCTAATAAGGAGCCAAACATGCCAGAAAAAGCTGTAACAGGGCAAATTACGCCTGTTTTGTCTTCGAAAATCCCCTGCCTTTTGGCGCAAAAAACGATTTTCGAAACCCATGGTCATCTGGTATACTAGATGAGGCATAGCAAACACAGTTGACATTCTGAGAGGCTCAAGAAACAGCCTAACGCAATCAGAATAAGAAAATACACCACCACCTTCTCGCTACAGCGCCGCG # Right flank : TGCAGCTATGTTGACAAGCTTCATACGAGGTATAAATGTGAGCATTCATGCATTTGTTAAGCACCATGGCTACCTACTCGTCAATGACAGTAAGTAGCCGTGGTTTACATGAAATCGAGACCGCATATCCCTTTATATGCGTTGCTTAGACCATATCGTTACAGAAGCGCCGGAATTCGCAGGTTGGGCAGCGGTGTGGAGTTCGCGTCGATACAGGAAACGCTTCTCTTTCAAGCAACTGGTGGATCTCCTGAATCACATGCCTAACTTTCTTGCGGAGGGCAACAGTGATAGCAATCTTTTCCGCTTTGCGCAGAGGGATGGAATAGAGAAAGCCATTTCGAACGGGCATTTGGAGTTCCTCCTCTAAAAGTAGCGCGTAAGCAGCCAGCTGGAGCTTAAAGTGCGGACCGGCCTTTTGCTCAGAATATTTGTAATCGACGATAATAGCTTCTTTGTCCTCGGCTTCCCATGAAGGCGTGATAATTACAAGATCCATT # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGCAGACTCTTCGATCCGCCAGAGGATCCTGTAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [8,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.80,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,1.15 Confidence: MEDIUM] # Array family : NA // Array 4 88021-90212 **** Predicted by CRISPRDetect 2.4 *** >NZ_BNJF01000006.1 Ktedonospora formicarum strain SOSP1-1 sequence06, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================================================================================================== ================== 88021 37 100.0 36 ..................................... TTTAATGTTGAGAGTGTGAGTCTCACCATCGACGCT 88094 37 100.0 37 ..................................... TTGCTAAGTTTCTTCCATGCAGCAGCTATAGCGGGCA 88168 37 100.0 41 ..................................... TCCAGTACCACACAGCAACTCTTACAAGAGTATGAGAATCA 88246 37 100.0 35 ..................................... TGTTGTCCTTACCAGTTGGTGCAGATCGCGGCTAT 88318 37 100.0 38 ..................................... ATATGGGACTGATGTGCGCGAACAGGACAGGCTCATCA 88393 37 100.0 35 ..................................... TCCTATGGCAATGCGATATACGCCAGTACAATGGC 88465 37 100.0 38 ..................................... TTTAGATAAAGAGTATTCGTCTTTAATGCCTCACTCAA 88540 37 100.0 40 ..................................... TTGAATATGGTAGGCATTTTGAATGAGGCTGTGGAGCGTA 88617 37 100.0 35 ..................................... ATACTCTTTACTAGCACCTGCGCGGGCTTGCCTGG 88689 37 100.0 39 ..................................... ACAGATAACCCTCGGCAATCGTACCTGAAAAGGGTGGAT 88765 37 100.0 38 ..................................... TTCAATCACATGATGATGTCTGAATGCACCTTCAGCAG 88840 37 100.0 41 ..................................... TTCGAATAGAATATCCCGCAACAACCGCTGTTATCAAAACA 88918 37 100.0 36 ..................................... ATAGGCAAGAATGACGTATTTACCTGGGAAGTAGGG 88991 37 100.0 38 ..................................... GCGAAGGCAAGAAGGACCCTGAAGAGACAAGGCTCAAG 89066 37 100.0 36 ..................................... AGCGCTCACATACCACGATAGCTGTCCCGCTCGCAT 89139 37 100.0 39 ..................................... GTCCAGGCGGCGCGCTCATTCTCGTAGAGCAAGTAGTAG 89215 37 100.0 39 ..................................... TGATGAAGCTGCTGGCGGAAGTGAACGAGCGGTACGACG 89291 37 100.0 36 ..................................... TTTTCTCCAATAAGGTCGCCAGGCCGTCAAGCCAGG 89364 37 100.0 37 ..................................... TCAAATGACTTCTGGGAATGTGATCGGTATTCTGCTA 89438 37 94.6 38 .......T.....T....................... CTCAAGGTCTGCCATTTTTGCGGGCAGGAGGGCGTCAG 89513 37 94.6 37 .......T..........T.................. CTATATTGGTGATGGTTGCGGTAATGAGATGATGGGC 89587 37 86.5 36 ..........GT........TAC.............. ATTAAAACGTGGTTATCCGAATCAATGATGGTATTC 89660 37 89.2 37 .......T.............CA......T....... CAAGTTGGATGAGAGGTGTCTGCTGCATATTTTACTC 89734 37 83.8 37 ......AT............AAGT............. TCCTTAAACCAGATGTTGAAATCTTCGTCAATCGAAA 89808 37 78.4 37 ....G..T.AGA........TCA.............. AGAGAATGAGAGCGCGTACTCCTCGCGCAATGAGCTT 89882 37 75.7 25 ....G..T.AGA.........ACA...........C. TATGGCTATGTGCGCGCGAAACACC Deletion [89944] 89944 37 70.3 37 ....G....AGA.T....T.AAC...A......T... ACAATCGCTGCTCCCGCTATGGTAGATTGCACGGCCT A [89946] 90019 36 75.7 120 ..-....AGGAA........AAG.............. TGCATATCAAAGCTCTTTGTTGTGAGCCAGGTCGAGTGTAAGAAGTGTAAGAGGAGTCAATCCGAAGGAGGATCTTGCAAGAATCCACTCCATTTACACGGCATCCCGCGATATAATTGA T [90023] 90176 37 83.8 0 .......G..G.........TGC...T.......... | ========== ====== ====== ====== ===================================== ======================================================================================================================== ================== 29 37 94.2 40 GTAGCAGCTCTGTCGATCCGCTTGAGGATCCTGCAAG # Left flank : GATCGAGCGACAGTTTACTGGAACGCTCATCGTCATCCTTTCGTTTGGGGGCGAAGGCGGCGTCATCGCCCTCGTCGTTCATCTGGGATTGCCATCCCGGCCAATGTCCGTTAATTTGGTGGATGCACCACTTAGTGCTATACAGAATGGAATGAAGATTTCTTTCATTGCCATTCGTTGATTATCTATAACCATCTATATTTTGCCCTTTCCCGAGCCTCATCCGAAAATCCCTGAAGCTTCAAAGTTAAATAGGGTTAAATTGGCCTTGATATGCTGCAAAATTAACCTGAGAAACAATAGAAAGATGTAGGAATAGACAAAAGGCGCCCGAAAATCCCCCCGCTTTTTGGGCAAAAAAACGATTTTCGAATAGGTACCAGATATGGTATACTCACAGAAGCATATCGATTAAATTCGAGACCATGAGACGCTCAACAACGGGCTTAAAACAACTAAAACGTAAAAACATACCACCCACCATCATTTACCACCCTGCG # Right flank : GTGCACGCATCGCTACAGTAGTGCCGATCTCTTCCGAGTAGCACGTTGTGAGCGCACGCGCCGCCTCTTCCATTGTCTTGACGAAAGCCGCCAAGCCAATATGCAGCGTTGGCTCAGCTTCAGCGACCACTTGTCGCCGCATATCCATCTTTCTCGGACCACAAGAGAGACACGACCAGCGATCACAGCGCGCACGCCTCACTTTGCCCGCTTCCCGATGACGCAACGTTCAGGCATCTGGACTCACATAGAGCGTATCGGTTCTATCCTCCAAATGCCATTCCGCCCGCTCTTCTACCGTCAGGGGATTTCCTGGTCAATACATCATCCAACTCCTCTCATACATACTCAGCGTGACCCAGGCAAATCAAATCGTTATATACTTAAGCTCAATAACACATGAAGGGAAGCTCGTAATGCACGCTTCCTTTAGCTCTCTCACGATCTTATTTTTCTTTTCAGGAGGAACACATTGTCCAAACAAAAAGACCAGCAATGGG # Questionable array : NO Score: 2.69 # Score Detail : 1:0, 2:0, 3:0, 4:0.71, 5:0, 6:0.25, 7:-0.27, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGCAGCTCTGTCGATCCGCTTGAGGATCCTGCAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.20,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-64] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA //