Array 1 21431-23555 **** Predicted by CRISPRDetect 2.4 *** >NZ_LWSX01000121.1 Xanthomonas translucens pv. arrhenatheri strain UPB455 Xt_arrhenatheri_UPB455_Contig_87, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================== ================== 21431 31 100.0 34 ............................... TTGCTGTCCGCGGGGGTAATCTGCACCCGTAGCG 21496 31 100.0 35 ............................... TTGTCGGGGAAAATTGCTTGCAGCGATACGATGCG 21562 31 100.0 35 ............................... ATATTCAGGCTCGCCGGGATAACCTGTATGTTACT 21628 31 100.0 34 ............................... CGGCTATCAGTTGCGCGGTCTGCAAGCGCGACTG 21693 31 100.0 36 ............................... TGGACGTATTCATTCCCAAGCTTGTCGCACTCGGCA 21760 31 100.0 34 ............................... CGAAGATGGGTTTCATCGACACTGAAAACGGCCG 21825 31 100.0 36 ............................... CGAGCGCCAGGAATGAAATCCTTGTCGCGCCCCATC 21892 31 100.0 34 ............................... GGCACCTGCGCCTGGCGCGTTGCCTTGGTTCCAG 21957 31 100.0 34 ............................... TGCTGTTGCTGGCTGGCGATCAATCCAAGAATCC 22022 31 100.0 34 ............................... GCCCATCCCACGTTACGTTTTCCCACTTCAGCGG 22087 31 100.0 34 ............................... AGCAACCCCGAAGGCGTAGCGCGATCAGTGACAT 22152 31 100.0 36 ............................... CTGCACGCGCTGGCCGCAGCACAGCACAAGCCGGAT 22219 31 100.0 34 ............................... TTCGTTACAGGGCCACGTTGGAGTTGGCCCGTAA 22284 31 100.0 35 ............................... ATCCAGCCAGTCGGACCAGCTATCCATGGCCTCCC 22350 31 100.0 34 ............................... CGCATTACCGCATCACGCAAGTCCTGGTGCGCGT 22415 31 100.0 35 ............................... CTTCGTTGGATTTCCCGACGCGCCATTACCGCGGC 22481 31 100.0 35 ............................... GGTCGCTGCCCCTCAATGCTGCACCGGTAGCCCTG 22547 31 100.0 35 ............................... GCGAGCATCCAATCGACAGCCGAGCCGACGATAAC 22613 31 100.0 34 ............................... GGGCTATCCACCACCAGCTCAGGCGTCGTCAGTG 22678 31 100.0 33 ............................... ATGGCATTCATGGTGGCGTCGTCTGCGCACCAG 22742 31 100.0 34 ............................... AGCCGTTGATTCGTAGCCGTCGATTTCGTCGCAG 22807 31 100.0 32 ............................... ACGTACCGCTGGCGCGCTTTTCGTCCATGAAC 22870 31 100.0 34 ............................... CAGTCGGGCTTTGCGCCCACGGTATGCGCGTAGA 22935 31 100.0 35 ............................... TGGTTGGGCTTTTGCATGAAGGCCTGGACGAATGC 23001 31 100.0 35 ............................... TCGGCATCAGGTTGCGCAGTGCAGCCTGCGAGGCT 23067 31 100.0 34 ............................... TGCCTAGCGATGCGGTAAACCTTGACGTACCGGG 23132 31 100.0 36 ............................... ATCGCGGTCTTGCTTGCTCATGGCGGTGTCCCTCTG 23199 31 100.0 35 ............................... GCATTACCGGTGTAATGTAACACAGATCTTCAAAC 23265 31 100.0 34 ............................... TTGCTGCGCGGCCGGGTTGTTGACGATCGCCGGC 23330 31 96.8 33 ....................C.......... CATGTGGCTTGCCCGCATTGTGGCGAGCACCAG 23394 31 100.0 34 ............................... ATCGGACGGCACTCTCTGGAGGCTTGGAGCTATC 23459 31 93.5 34 .............C......C.......... GCGTTGGCAGTTCGTCGCGCTGGTGAGTTTTAAG 23524 31 83.9 0 .....T.......C.A.C.......G..... | C [23549] ========== ====== ====== ====== =============================== ==================================== ================== 33 31 99.2 34 GTCGCGTCCTCACGGGCGCGTGGATTGAAAC # Left flank : TGAAAAGGCCGCCGCGCCATGATGGTTTTGGTCAGCTACGATGTCAGCACGAGCTCCCCCGGCGGCGAAAAGCGACTGCGCAAAGTCGCCAAAGCCTGTCGTGATCTCGGCCAACGCGTGCAATTCTCGGTCTTCGAAATCGAAGTGGACCCTGCACAATGGGCCGCATTGCGGCAGCGCTTATGCGACCTGATCGATCCGGGCGTCGACAGCCTTCGCTTCTATCAGCTCGGCGCGAAATGGGAAGCACGCGTGGAGCACGTCGGCGCCAAGCCCAGCCTTGACCTCAAAGGCCCACTGATCTTCTGACGCGAACCGCAAGCGACCGGGGAAAGCCCGGCAGGTTCGCGCAACAAACCAAGTCATTGATTTAAAAGAAAAACACCAACCTCTTCCGCTTGCTGGCATGTCCGCGGAAGCCGAATTCGATTGCGTCTCCTAAGGGTTCCGCAAAAGTGCGGACTTTTTCCCAACACCCATAAGCATTTATGCTCAGGGCC # Right flank : CTGACTTGGCGACGCCGTGTCGTTCTATCGCCTTTTCCCACAAAAAAAGCGCAGTCTCGCGACTGCGCCCAGCGTGCCGCGCCGGCCGGGAGAGAGTCGGCTGGCGCGATCCGTGACTGCGGTGTCCCTAGCGGGACGCGATGCGCATCACTTGACTTCGAATTCCTGCACCGTTCCGGCCGGCTGGCCGTTCACGGTGACCTCGGCCTTGTACTTGCCGGCCGGCCAGCCCTTGGCGTTGGTGAAGGAGATATTGGTGGTTTCCGCACCCGCGGTGGTCAGCGTCGCGTTCTGCTCGCCGGCGGTCTGGCCGTCCTGGAACAGCAGCTTGGCGCCGACAGCGGTGTTGGTGGAGGAACCCTCGGTCTTCACCGAGACGATGATGGTGTCCTTGCTGCTCAGCGTGGTCAGCGGCGCCACCGTCTTGTCGGCGCCCGCACTGTTGCCCACGGTCACTGAGGCGACCGTCACCGTGCCTGCAGTGGCCGCGGCCGGCGCCG # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGTCCTCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGTCCTCACGGGCGCGTGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.30,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //