Array 1 735632-734790 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP023697.1 Streptomyces prasinus strain ATCC 13879 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 735631 37 86.5 36 GC............C......GA.............. ACCCTTACCTCCCCCAACGGCGGCCGCAGTGCCCAC 735558 37 89.2 35 G...........T.C......G............... AAGTCGCCGTGGTGGAAGGAGTTCAAGGCTGATCT 735486 37 86.5 35 ..........T...C......GA.............T CCGTTCGATGTGCGGGTGGGTAGCGAGGTGATGAC 735414 36 81.1 37 ....T.A.....-.......TGA........T..... GGCGGGAGTCTCCTCCCACCACGCCGGACCCGACGGG 735341 37 91.9 37 .....................GC.A............ GTCCGCATCGCCCACCGGCTCTACCCGGCCAGCTCCA 735267 37 91.9 37 .....................GC.A............ GTCCGCATCGCCCACCGGCTCTACCCGGCCAGCTCCA 735193 37 91.9 35 ..............C......GA.............. GGCCCCGGCTTGCCGGTGGTGGTGTCCGCGGCCAC 735121 37 94.6 36 .....................GA.............. GCGAGGAGCCCGGCGTCGACCAGCGCGGCCTCCACC 735048 37 89.2 37 ..............C......GAT............. ACCCCGGCGTCGGTGACGTCGATGACCTGCGCCGAGA 734974 37 83.8 37 G.........T...C......GAT............. GGCGGGAGCCCCGCAGACTACGCCATGGAACGCGTCG 734900 37 100.0 37 ..................................... ATCGAGACGACCCAGGTAACCCAGGTCGATAACGACA 734826 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 12 37 90.5 36 CTGGCGGTCGCCCTTCGGGGCAGCCGAGGATCGCAAC # Left flank : TCGGCGACGGGCTGGCCGATCCCGACGATCTGGACGTCCTCCGCTCGTACTACCAGCACCGCTACCGCCTTCAGGCAGGACAGCACTCCGAAGACCCCAACGGAGCCACTGGAGAGGTCATTGAGGCGCTGCGAGCAAAGCTGCACTACCCGGAGGTCGCGCGCAGAATGCGGATCGTCGACAACGAACACTCCGTGGCCGTGGTCGTCATCCGCCCCCGGCTCGCAGAAGAAACCCGACGGGCCGCCCAGAAGGCCGTCGACCAGCTCCGCCGCGGCCTGCCGACGCCGGCGACCTACCGCACCCTGCAGGACCACATGGCATCCATCCCACAACGAGAACTGGAGACAGCGATCAATACCGGACACGCCGCCGAAATCGCCGGTGACCTATACGAATGGACAGGCCCCTACCACCCACAACGAGGAATCGAACCCGCCCCGTAGTGAAATCGGCAGCAGCCGAAGGCCCCACCGATCGATACAGTGTTCCGGGACAAA # Right flank : ATCGAGACGACCCAGGTAACCCAGGTCGATAACGACACTTGAAGTTCCCCCTTGAGCGTGGACAGCGGGTGGTTACGCTGCGGGGGCAAGAGCTTGTGCTGTCAGGGCCCGTGTTTCGAGTGGGGTGACGTAGCCGTAGACGGGATGCTTCCGCAGGCGAGTGCGGTTGTATTCGACCTCGATGAAGTGGAAGACATCGGCGCGGGCCTGTTCGTGGGACTCCCAGACGGTGGTCCCGATCTCCGCCTTCAGGAGGCCGAAGAAGCTCTCAGCTGCGGCGTTATCGTAGCAGGAGCCCGTTCTGCCCATACTTTGCCGCAGCCCCAACTCCTTGACGAGGGCGCGGTATTCGCGTGAGGTGTATTCCGCTCCGCGGTCCGAGTGCGTGATGCATCCCTCCTTCAGCCCGCCCCGGCCGGCGGCCATCCGCAGGGCGTCGACGACCAGGCCGGCCCGGTGGTGGTCGGCCATCGCGTAGCCGACCACCTCGCGGGTGGCCA # Questionable array : NO Score: 5.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.53, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.29, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGGCGGTCGCCCTTCGGGGCAGCCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGGCGGTCGCCCTTCGGGGCAGCCGAGGATCGCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.00,-12.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [10-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 745034-746451 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP023697.1 Streptomyces prasinus strain ATCC 13879 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 745034 35 80.6 37 .A.......-..CTCC.....G.............. GAATTCTGGACCAATAAACCGACAAGCATGGTTCAGG 745106 36 86.1 40 ......C..T...TC......G.............. GGCACCAAAGCTGAAGAACTGGGAGATGCGTTGTTCGCGC 745182 36 91.7 36 ..............C............A...A.... TCCTGCTGCCGGTAGATGCTGACTTCGGCGGCTTCC 745254 36 88.9 36 ....A........T...T.T................ AACGCAGCGAGGCATATCGAGTTGGGCTCCAGCGCC 745326 36 83.3 36 ...T.........TCC.A.T................ CCGATCAGCATCTACGCGCCGGGCGCGTACCAGTCG 745398 36 91.7 38 ..........T...C......G.............. GACAGCGACGGGGCGTACGAAGAGGACGTCATGCAGCG 745472 36 91.7 37 .............TC...A................. CAGCCCGCCTCGGAACCGAACGTAGAGGACGCCTCGC 745545 36 86.1 36 ............C.CA.....G....A......... AATCTTGATCCCAAGCAGGTCACCATTGCAGCCTTG 745617 36 88.9 35 .A.......T....C...A................. GTCGGGTTCGGTCTGGACTGGTCGACGGAGAAGCA 745688 35 80.6 37 ..............C...-TA.T..G.....A.... CTCATCTACCCAGCTGGCTTTCTGGTCATCGGTCGTA 745760 36 91.7 36 .C.........T..C..................... CACGAGCTCACCCGCGAGTTCGCCGAAGTCGACAAC 745832 36 94.4 37 ..............C................A.... ATGCCCGGCAAGTACGACAGCGGCGGTTACCTGCAGC 745905 36 88.9 36 .......T......C....T.......A........ TCCAGGTACTTCGCCGTCCTGCCCGGCGCGTGCCGC 745977 36 100.0 37 .................................... CAGCGCGGCTTCTACGTGTCCGAGGGAGAGATCACCG 746050 36 88.9 38 ...T...........AC..T................ CGCTCCACCAGCTCGACGAGCTGCTCAGCCAGCTCGAC 746124 36 86.1 38 .............TCAA..........A........ GGCGTCCTCACCAAAGCCGCGCAGACCCTGCCCTCGTC 746198 36 97.2 36 ............C....................... GTCACCCCTGACGGCCTGGAGGAGGCTCTTGAGGAC 746270 35 88.9 37 ..............C...-..G.....A........ GTGTCGAAGATCGGCGGCGACGACTCCGCGGCCGACC 746342 36 91.7 38 .A............C....T................ CACAACTGGTACGTCACCCGCAGCAGCGAATTGCCGAC 746416 36 91.7 0 A......................T....G....... | ========== ====== ====== ====== ==================================== ======================================== ================== 20 36 89.5 37 TGGCGGTCGCCCTCTGGGGCGACCGAGGATCGCAAC # Left flank : GCGACGACGAGCCGGGAGTCGGCATCGATGACGACCTGGTGGTTGGTGGAGTACCGGTAGTTCTTCGACTGCTCGGCGACGGCATGGTCGCGGGTGGGGACCAGGGTTCCGTCCACGATGAGCACGGTGTCCTTGCGGAACCGCTTGCGCTGCTGGAGCGCGAGCACGGGCCCGAGGTGGTCGATGATGCGGTCGGCCGCCGACTTGGACACCCCGAACAGCGGGGCCAGTTGGCGCAGGGTGAGGTTCGTCCGCCAGTACGCGGCGACCAGCAGGACCCGGTCCTCCAGCGGCAGGCTCCAGGGCCGGCCCTTGCGCACCGGATCCGCACCCTCACGCCGGAGCGCGGTGATCAGCCTGCCGAACTGGCGCGGGCTCAGCCCGGTGAACGGGGCTATCCAGGAGGGCTCCGACGCCGTGATCAGACCAGACACGGCAAGATCATCTCACCCGTGACCAGCAGTTACGGGACATCCCTTAGGGAGTGTGCTCAGTACCTC # Right flank : CTCCGTGCCGAAGCCCTACAGCCTGCTGCATGCTGGCTGGCGGGCGCCCTGAAGTTCCCCGCTGCCCGGACAGTCTGATACTGGGAATGCACTGGTCGCGACCCTCGCAGTGACACCTGGATGCTGCGCCCTGCCTACAGGGTCGCTACGACGATGGGACAGCAGGAACCACCGGCTGTCCTTGTCACGGTCACCGACGCATCCCGCATCGGGGATGTCCTCGCCCGCCGCCCAAAAGCCTGGCCTGTGTGCTGGAGCAGCCTACGCGGTGCGGGTGGTGACGGCGCGACGGCCCGGTACGTCACCGTCCAGGAGGCGAAGGACTTCATCATCTCCACCGACTGAATCTGCCTGGTGATTGAGCAGATCTTCTTCGACGCCGAGGACGACGTGCTGCGGCACGCGGTAACCGTCTACTACGGCGGCCACCCCTACGTGATCAGCCATCAGCCCACGCCGGAAGAACCCGCGCGACGCGAGCAGCCGGCCCCGTGCTGCTT # Questionable array : NO Score: 3.37 # Score Detail : 1:0, 2:3, 3:0, 4:0.50, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.11, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGGCGGTCGCCCTCTGGGGCGACCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched TGGCGGTCGCCCTCCGGGGCGACCGAGGATCGCAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-13.20,-13.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [24-36] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //