Array 1 95936-94201 **** Predicted by CRISPRDetect 2.4 *** >NZ_NQEP01000052.1 Klebsiella pneumoniae subsp. pneumoniae strain KPPSTH08 NODE_5_length_322826_cov_69.6451_ID_9.ctg_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 95935 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 95874 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 95813 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 95752 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 95690 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 95629 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 95568 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 95507 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 95446 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 95385 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 95324 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 95263 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 95202 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 95141 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 95080 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 95019 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 94958 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 94897 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 94836 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 94775 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 94714 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 94653 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 94592 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 94531 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 94470 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 94409 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 94348 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 94287 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 94229 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 29 29 99.1 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //