Array 1 746692-747371 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL872323.1 Enterococcus casseliflavus ATCC 12755 SCAFFOLD1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 746692 29 96.6 35 ..............G.............. TTACGATCGGACTGCCGCCTGTTGCCCCTTCGCGA 746756 29 100.0 36 ............................. CAAATCGATGAGACCGTTTGGCGCTGGTGTACCTGT 746821 29 100.0 36 ............................. CTGGCAAATTCAATCCGCACCTCTGAGCTTTTTCTT 746886 29 100.0 36 ............................. AATTGTTACGCCTTTGCGTACTTTGCCTGTTTCTCT 746951 29 100.0 37 ............................. GCAATTACTTCATTGGCAATCGTGTCATTTGATTTCA 747017 29 96.6 37 .......C..................... GCGATCATAGCGAAGAATACCGCAGAAGAACAATCAA 747083 29 100.0 35 ............................. AAAGGGGGCTAATCCCTCATCGCTTTGATTCATTG 747147 29 96.6 36 ................A............ GGAGGAAAGAGATAGAAATCGTCATAAAGGAAATGG 747212 29 100.0 37 ............................. AGTGTAGAACGTTTGAACAGCGTGCTAGGATAGCATG 747278 29 93.1 36 ..A.............A............ TATTTTACAGTTCCTACAAGTTACTCTATGTATCCG 747343 29 93.1 0 .......................T....G | ========== ====== ====== ====== ============================= ===================================== ================== 11 29 97.8 36 GTTCAAATCTAAAATAGTGGAATGTAAAT # Left flank : GCTTTAGTTTATTGTTATGTTGCTGGAAGTAGGGCTACATTAAAGCATAGATACAAATTAAAAAAGATGTAGTGGCGGCTTTTTCATCATTCATTTCGAGAATCTATTAAAAGAAGCGAACCAAAAAATTGTAAAATGATTTTTTGGTTCGCTTCTTTTTTGTTTTTGCGTAGAAAATGATCCAACACAAAAAGTCCGTTCGACAGAAGACCTGAGAAAATTTGGACCGAATCTTTCTTTTAATACAAATCGGAAAAGATCCGAAAACAAGTGTGGTGGTATCGTTAGTCCAAAATTGATGACAGAATGCTTTAAATGATTCGTCTGTCGATGTCGAATAACTCAAATTTCCCCTAGTTACGACAGATGACGAAAAGTACTTAGAATATAAGCTTCTTTTGATATATAATGTTATCTAAGGGGATGAATCACTCCTAATTTTTGACATCGACAGAAAGAGGACTATAAAGCCTATTATTTCAATGTGTAGTAGATGCGGG # Right flank : GCTACTTGTTGACCGCTAGTAACAACCGTGTGATCTTGTCTAAATTTAATATAATGGAGCATCAACAGCATTCAATTAACGATCGACTGAATCATCACAACATCACCCTCCAAAAAAGATGGAGAGGCTAGTCACTTTCTCAGCTCGAAACAAACTTTCATCACCAATTCCCTCATTATAAACAATGCAATCCTCCAATCAACCTGCCATCAACCCAAAAACTGTCGTCCTTCCTTCTCAATCAACTCACAAGTCCATTTATCCTCAAATAAAGATGCCATCTGACATGCTTTCGCAAATAAATCCGAATCTCTGATCGCAAAACTTTTTCGAGCAGTGGCTAACGAATAGTAATCATAGCGCTTGCTCTTTTTTGCCAATAGCAGGGCTTGATCCGCGGCTTTTTTCGCCTCTTGGTGTTGCTGTTCTTGCAGATAAAGCAGGGCGACATTCAAATGAATTGCACACTGTAAAGGCACAGTATTTTCTAATGCTTCGTA # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCAAATCTAAAATAGTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.70,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 1193880-1194174 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL872323.1 Enterococcus casseliflavus ATCC 12755 SCAFFOLD1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ================================================ ================== 1193880 38 100.0 48 ...................................... TAACCGTACTAGGAATCACTATGATTGGCTTGCGGAGCAAGACAGAAT 1193966 38 100.0 48 ...................................... TAACCATACTAGGAATCACTGGGGTTGGCTTGCGGAGCAAGACAGAAT 1194052 37 94.7 48 .........................-T........... TAACCATACTAGGAATCACAAGGACTGGTCCGCAAAGCGGAACAGAGC 1194137 38 94.7 0 .........................CG........... | ========== ====== ====== ====== ====================================== ================================================ ================== 4 38 97.3 48 AGATGATGAACAGTACTAGGCGACCACAGGGAGCGTAG # Left flank : TAGTAGTGTGGTTGACGGATATAGCCTGAATATAAAGACATAAAAACAGCTCCTTTCATAGAAACAAAACCTTCGCTATTCAGCATAACGCAAAAAGAAAGAAAAGCAAACAGAAGGAGAACTTCTTTGCGTTGATCACTAGAGAAAACGCTACTGGAAAGCAGCGGAGTGAAAAAGACAGTGAAACACCTTGACTTTTTCATAGCTTTCTTGTAGTTTATAGATAATATCAAAAATCAGTGAAGGATCGAGTACTTTATTCTATTCCTTAAAAGAGAAAACTGCCCCGGCTGAAAGCAGTTTAGGACGTGTAAAGGAAAGACAATCTGGAGATGAACAGAAGAAAAGCTGTTCCGTGACCGAGCGTTAATCGAGAGGAGAAGAACATTTCTCGAATTTAGGTGGTACCGCGTGTAATCAAAACTCGCCCTTGTATAAAAAAACAAGGGCGAGTTTTTTGCTGTGAATCACTGCGACTGGTCCGCAAAGCGGAACAGAGC # Right flank : GTAACCATACTAGGAATCACTGGGATTGTCTTTTGAAGCAAGACAGAATAGATGATGACCAGCAGCAACCAACCACTAAAAGCGCAATAACCCAAAAGCCAAACACGAGAACAACCCACCCACATCAATGAGCAACAAGCAATAGGTGAATAAGCAAACAAGCAATGAAAGCAAAGAACATGGGCAACCATGAAACAAATAGGAGGATGCATACGATGAGTTACCAACGTCCAAAAGGAACCAACGATATTTTGCCAGGAGAATCCGAAAAATGGCAATTTGTGGAAGAAACAGCACGTTTAGTGTTTCGCGATTACCAATTCAACGAGATTCGGACACCGATTTTTGAGCACTTTGAAGTGATTGCCCGCAGTGTCGGTGACACAACGGATATCGTTTCAAAAGAAATGTATGATTTTTACGATAAAGGAGAGCGGCATGTGACGTTGCGTCCAGAAGGCACCGCACCGATCGCTCGTTCTTATGTCGAAAACAAACTA # Questionable array : NO Score: 2.52 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGATGATGAACAGTACTAGGCGACCACAGGGAGCGTAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [13,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //