Array 1 14268-13638 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADCKB010000019.1 Ructibacterium gallinarum strain DSM 107454 seq19, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 14267 36 100.0 30 .................................... CTTGACTATGGTATCAGAGAGTTGTCGCAG 14201 36 100.0 31 .................................... CTCTGTATTGTCTAATCAGTTCAAGTCCCGA 14134 36 100.0 29 .................................... TTCTACATGTCTGCTTAATCCATCTGACT 14069 36 100.0 30 .................................... GTGGCCAGTATGGTGGTAGAACACATTCTT 14003 36 100.0 30 .................................... ACCCGCCACATTGTGGCGGCTGGACAAACA 13937 36 100.0 30 .................................... GCGGCACATTGCACAAAACACCGATTGTTG 13871 36 100.0 30 .................................... GCGCGCGCCCGTCCAGCGCCGCACGCGGCG 13805 36 100.0 30 .................................... TTCCTTGCGGAGGAATACGGAAAAGTTATT 13739 36 100.0 30 .................................... TTAGCGCCCCTTGTCCTTCCTATTCCTTCG 13673 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 10 36 100.0 30 GTTTGAGAGCAGTGTAATTTTATAGGGTAGTAAAAC # Left flank : AACCTTGTCACAAAGCTGTATCAGTATGCGGAAAAGGTAATGATGGGCGAGGAGTTCTTTGTATCGACCCAAAAGCTGATGCAGGATCATCTTGACTATATCACAAAAATTGCGCAGAATTTACCTTTTCCTCTTGACTTTTCCGATACCTTTGAGGTATCATATCTTATGAAAGCAGTCGATCTCCGGTTTGATACGGCATATGCCTCCCTCGGGGAACAGGTGGTGGATTATATGGAATCGGTCACCATGCTGGAGGGAGAAAAATGCTTTGTATTGGTCAATCTGCGGGACTATATCAGCGACCGTGAGATGGATGCTTTTTACCAAACCGTATTATATAAAAAATTAAAGGTTTTGGTGGTCAGCGCAAAGGATTATCCTCTGTCAGGGTATGAAACCAAGACAATTATTGACCATACCCTGTGTGTGATATGATTTTGTGGCTGCCTGCCCTATAAAATGACACGGCGTGTAGTGGCGTTTTCTCAAAATTTGAG # Right flank : AAATGACCTGCCGCAATGGTAAAACTTTCAAAAAAGATAGACAGAACTATTATGTTATAGAGGGTGTGACTGATATTAACGCATAGAACCTTGCGTCAGTAAGTGCGTACATAAATAAAGCTCCAATACAGCAGACGGAGAATGTACAAGCCTTTTCCTCAAACGTCCAAAACGCTTCTGTTGATATTGAAACTTCTGATGGTAATATAGCACACGAATCAGATAATGTCACTACCACTGCGAGGGATGTTGTTGAAAGCGTGTAGGATTGCAATAGATGTGTTACACTGATATTAAAAGCCGATAAGATAGCTTTTTTCACTTCGTATATCATTATTGATAATATCATGATTCTGTGGTATAATATTATTAAAAGCTGTACTGCTGGCCGTTTCGGACGTAGAGGAAAGGGGATTTGCATTTTCCGCAGCAGCAAGGCTTTTTTTATGTTTTTATAAGGTAGGAAAAATCAGAGACAATCACAAAAATAACTGAAAGGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAGCAGTGTAATTTTATAGGGTAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA //