Array 1 1313411-1315031 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP051227.1 Lacticaseibacillus rhamnosus strain LDTM7511 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1313411 36 100.0 30 .................................... AAGAAACGATCCCGAGTTTCTGGATTGCTT 1313477 36 100.0 30 .................................... TCATCAGTATTCATGGAAATATAGGATGCT 1313543 36 100.0 30 .................................... ATCATCGAATCTTTGGGGACCTTACCACTT 1313609 36 100.0 30 .................................... GATTGTTTCGGTTGCTTCTGTGATGCCACC 1313675 36 100.0 30 .................................... ATGACTGGTTGCCGGTAAGCGATGAGTTCA 1313741 36 100.0 30 .................................... CATACTTGTATGAGCACTTTGACTTGTCAA 1313807 36 97.2 30 ....................T............... ACCGTTTGTGTTGCATGAATATGATCACTA 1313873 36 100.0 30 .................................... AGGTGCTATGCCGCTTGGCATGACGATTGA 1313939 36 100.0 30 .................................... AATAATATTGTGCCAAAAGGTAGTATTCTA 1314005 36 100.0 30 .................................... TCCAAGGGCATTCCAGATTGCAGAAGCCCC 1314071 36 100.0 30 .................................... GGGTGATGCTGACAAGATCAAGACGGCTGT 1314137 36 100.0 30 .................................... CGCCTTACGGGCGACAGCTAGGCCTATGGG 1314203 36 100.0 30 .................................... AGATCGAGCATTACGGCTTGCAAGACTGCG 1314269 36 100.0 30 .................................... ACAGTTGAGAAAAGAAAATACGCATTTAAA 1314335 36 100.0 30 .................................... AAAAACACAAATGGCCGCTGCCACCTTATG 1314401 36 100.0 30 .................................... AAAAAAGCCGCGGAACTTCTCGGGCTAGAC 1314467 36 100.0 30 .................................... CACAGTGCCATTCCACAAACCCGACAGAAA 1314533 36 100.0 30 .................................... CGAGCTTGCGGCCAATATCAAGCTATATGC 1314599 36 100.0 30 .................................... GTGTGATCATCATTACCTCTCTGCCACTAA 1314665 36 100.0 30 .................................... ATCGCATACTTCATGATGATTGATGCCAGT 1314731 36 100.0 30 .................................... CTGTGTTCTCACGTGTCAACAATTATTTCA 1314797 36 100.0 30 .................................... TTGTGGTGCCAAAACGGGTTGTTGTCGAGA 1314863 36 97.2 30 ...................................G TTTCAGCAAATATGACGTCTAACATGCCTC 1314929 36 94.4 30 ..................................AT ACTTGGAAAAGTTGCTATGCAGTTTGAATA 1314995 35 83.3 0 .......................AA.C...-..T.A | AA [1315016] ========== ====== ====== ====== ==================================== ============================== ================== 25 36 98.9 30 GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC # Left flank : GAGCTGGATTTGGACAAGTTATTCCAACGCTTGATCATCAAGAAGGTAAGTCAATTGATAGAGGATCGGCGGCTGATTGAGTTGATTGAGCAGTCACAACGACTGGCAATGAGCTTATTGAGAGAGCCGTTGTTAAGTGAACTTCCAGTCACAGTCGAACCTGGTGGAAAACTTGAACAAATCATGAAATACTGTAATGTTCATTTTGATGAAGAAGTACTCACGGAGCCTTTCTCGAAAGTTGAAGCGGCAATTAAGACTTTGGCGAAACTTGAGGAGAAACGTCTTGTCATTTTTACCAACATCAGTCATTATTTAGATGTTGATAGTTTGAACAAGCTGTTAGATCAGGTTAAGGAAACATCGTTAGAATTACTTCTCATTGAATTTTCGGATGTCGAACGTAGAAAGTTTTTTGAGAGGTGCCAGTATATCTATATTGACAAAGATTTCATGGATAGCCGTGAACTGATTGATTAAGAGACTGTGTGAAAACACCG # Right flank : AAACCTCACCCCATAAATGCTATGCAAATCCCAAAAGAAGGCAACAGCAATGTCAAAAGCGAAACTAATCCTTTCCCCAGCCTTTTACACTGATCTCAAAGAAATCCGTCACATGTATCAACAGGCGTTCAAATCCATTTACGACAAATATCAAGATCGGGAAACCAACCCCTACTGTGAATCGTTGGAAAGCTTACAGAAAAAAGTTCAAACGGCATAACAATGCCTTCTTCTTTATAATCGTTAAAGATAAACACATAGGCCTGATTCGCGTTGTAACAGATCGCAAAAATTCGGCAGTCCGTATTTCACCATTTTTAATCTTGCCGTCTTATCAAGGAAAGGGATACGCTCAGCTCGGACTACAGTTGATTGAAGAACAGTTTCCGCTCATTCAAACATGGTATGTAGACACGATTGCGGAAGAACCTAAATTGGTACATTTGTATCGTAAAGTCGGCTTTCAGCAGCTGCCAGATCGGGAAACAACGATTAATGAG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: F [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //