Array 1 4805876-4806392 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP060828.1 Streptomyces sp. CRXT-G-22 chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 4805876 29 100.0 32 ............................. CGGTACCGGCCGGTGCGCCACCCCTGCGGGTT 4805937 29 100.0 32 ............................. GATGAGGAGGGTCCCGGAGTAGCCGAGCGCGA 4805998 29 100.0 32 ............................. CAGCACGCAAGGCGGGGCCCGTGACCGTGTGT 4806059 29 100.0 32 ............................. CCCCTCGACGCTCCCGCCCGTCCGGCCGGGGT 4806120 29 100.0 32 ............................. GGCTACGAGCGAATCCTCGCGGGGCTATCCCC 4806181 29 100.0 32 ............................. TACCAGGCGACGCCGGGCTGTTCGCACTGCCC 4806242 29 100.0 32 ............................. TCCCGCTTCGGCGGGGCCGGGTGGTCGCCGTC 4806303 29 100.0 32 ............................. CCTCCCATCCGGCGGGCGAGTTCCGGCCTGTA 4806364 29 89.7 0 .....................A..CC... | ========== ====== ====== ====== ============================= ================================ ================== 9 29 98.9 32 GTGGTCCCCGCGCACGCGGGGGTGTTCCC # Left flank : TCTGCTCGAACTCCTCCCCCTTCGCCGCGAAGCCCGTCGGCAGGCCCCACGGGTGCCTCTTCGACCACAACCTGTGCTTCAGCAACAACACCTCCCCCTCCTCGTTCCGCACCACCCCCGTCACGCCGACCACGAACTTCGCGTGCGCGAGCCAGAGGATGCGCCACTGAAGCGAACCTCGAAGCAAATGCCACAACCGGGGGATCAGGTGTTTCACGGGGGCCCTTCGGGGGGGTGCTGTTCGGGGTGAGCACCAACTCTCTCAGCCGACGGGGAGTTTGGCGTCCAGAGGGGTCCGGGGGCCGATCCACCACACAACACCGGACGCGCTACGAGCGCCCGCCCCCAAGCGCTTACGACGTTCCGCCCCCGCGCGGGGACGGGGGACCGTAGGGTCGGCTTCGGGGGGGGTTCCGACCCCAGAGATGGCCAAAATGTCCGTTTCCTCGAAAGTAATGAAACTCAGCCCGCAAACCGAATAACGCCGCAGGTCACGGACG # Right flank : CTGGGCGCCGCGCGGTCCGGCGACGCCGAGGTCAGGGGGTCAAGGACAAGGCGTACTCCGGCCACCACACGCCCGCTGGGGGCCCGCCTCGGCAGGTGCCGTCGGATTCGCCGGGGCGTTTGATCCAGAGGTGGGCGTCGAGGGAGGGGGTGTTGGTGTGGAGGGTGGGGGGTGGGCCGAGGGTGCGGGATGGGGGGTTGCACCAGGGGTCGGGGCCTGTGTAGGGGCCGTTGCCGTTGCGGCTGGTGTCGAAGACGAAGTGGGGGGTGTGGCCGGTGGCTTGGGCTAGGCGGCGTGCGTAGGTGAGGAGCGTGGGGGTGGTGTGGAAGTTGGAGACGTTCAAGGAGAAACCGTCGGCTCGGGGGAGGCCCGCCTTGTTCAACGCCCTTGCCAGCCACGGGAGGTCGCTGATCCAGCCCGGGTGACCGGCGTCCACGTAGACGCGGACGTTCTTGTGCGCCTTCAGCCGATCGACCGCGTACGCCAGCAGGCCCAGGCGT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 9674713-9670903 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP060828.1 Streptomyces sp. CRXT-G-22 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 9674712 29 100.0 32 ............................. CCGCAGGTAGCGGTACTCCAGCAGGTCCACGC 9674651 29 100.0 32 ............................. GGGTCCTCGGACTGTTCCTCGTTCGTGGGCAA 9674590 29 100.0 32 ............................. CAGCCGGTCCCCGACAAGCCGCAGCACGAGCC 9674529 29 100.0 32 ............................. CCCGCCGCCTCTGATGGGTGGCGGGCTTCTTT 9674468 29 100.0 32 ............................. TGGAATTCGGCGGACGGGGGGGTGACGGGGGC 9674407 29 100.0 32 ............................. ACCTTGTTGGTCCCGTCGGCCGTGAGGCTGTC 9674346 29 100.0 32 ............................. AACTGTCCCCAGGGGAAGTCAGCGGCAGCGTC 9674285 29 100.0 32 ............................. CGTGAACTGTCTGTGATCGTCCCCGTGGCCAG 9674224 29 100.0 32 ............................. AACCTGGTCGACCAGTTCGACGTGGACACGAA 9674163 29 100.0 32 ............................. GCTGCGATCGAGTCGTTCAAGCACACGAAGGG 9674102 29 100.0 32 ............................. GACTCCGGATACGACCGCAACGACCGGGACGT 9674041 29 100.0 32 ............................. ACGCGAACGCCTCCCGCTCCAGCCGGAGCTCG 9673980 29 100.0 32 ............................. GCGTCCTGGAAGCCGTTCCAGGACTGGAACGA 9673919 29 100.0 32 ............................. TGGTTGGCGACGGCGATGACCAGGTCCTTTTC 9673858 29 100.0 32 ............................. GCTGCTCCACCCCTCCTTGCGGGCGGCGATTC 9673797 29 100.0 32 ............................. GAGATCGCGCTGCCGGTCGCGTTCTGGGCGGA 9673736 29 96.6 32 .................C........... CCGCGTGCCCGTGGGAGGAGAACGCCCGCCGG 9673675 29 100.0 32 ............................. ACCGCTTACCCGCCTATTCGCGTGCAACGGAC 9673614 29 100.0 32 ............................. GTCCTCACCGAGGCCGTCATCCAGGACAACAC 9673553 29 100.0 32 ............................. CAGCGCAGGGCCGAACGCCAGCGCGGCGGTGA 9673492 29 100.0 32 ............................. AGGCGGCCGTCAGCAGTAAGCAAGCAGGCAAC 9673431 29 100.0 32 ............................. TTCAAACCCACCACCCGGGCCGGGGTGATGGT 9673370 29 100.0 32 ............................. CAGGAGGAGGGCCAGGAGGTGTCGGTGAGCGT 9673309 29 100.0 32 ............................. GTTGATCTTGAGGCGCATCCACCGGATGTCCA 9673248 29 100.0 32 ............................. AACGCCTCCTGGAGGGCCGTAGAGCTGTCCGA 9673187 29 100.0 32 ............................. ATCTCCGGCGGCCTGGCTCCAGAACGGGTCGG 9673126 29 100.0 32 ............................. CGTCTGGATGGCCGGGGCGCCGGGCCCGGACC 9673065 29 100.0 32 ............................. GTCCTTGGGCCTGAGCTGATGTGGTTCGCCAT 9673004 29 100.0 32 ............................. CTGCTTCACGGCAAGGGGCCTCCCCATCGCCT 9672943 29 100.0 32 ............................. TACGAGGTGTGGCGCGACAAGGTCCTCTCCCT 9672882 29 100.0 32 ............................. ACGGCGAGGCCCCGGCGGACGCAGGTGCGGGC 9672821 29 100.0 32 ............................. GCCCACCAGCCCGTGCCGTCGACGTTCCGCCC 9672760 29 100.0 32 ............................. TTCATGCGCGCTGGCGAGTTGCCGTACGACGC 9672699 29 100.0 32 ............................. GGTTTGCGTGGAAGGCCGTTGCCCGGAGGGCG 9672638 29 100.0 32 ............................. TGGATCACGGTAGCGAACTCGGCGGAGCGCTG 9672577 29 100.0 32 ............................. ATCAACGCGGACGCGACGATCCCGATGAGGAT 9672516 29 100.0 32 ............................. ACGATCGAGGCGGTCCGTGCCGAGCAGAGCCG 9672455 29 100.0 32 ............................. CTGCCTGCGTCACGGGCTTCGCCCGCTGAGTG 9672394 29 100.0 32 ............................. TCGGTCAGTGCGCGGGTCATGGGCCTCAGCTT 9672333 29 100.0 32 ............................. TTCTCGTGGCAGTCGAGGTACAGGCCGGCGCG 9672272 29 100.0 32 ............................. TCGTCGACGTCGCGTTGCCACGCCTTGAGCTG 9672211 29 100.0 32 ............................. GCCACCCGCACCCGGACCTCCACAAGTAGGGG 9672150 29 100.0 32 ............................. CAAGTGGGGCGGACCTCGACCGGCGCGCCGCC 9672089 29 100.0 32 ............................. GCCGCCCTGGACCTTGAGCTGGTCGGGATGGA 9672028 29 100.0 32 ............................. TTTTTAGGTCCGAGTCAAGCTGATCCGCAGCT 9671967 29 100.0 32 ............................. GAATTTCATCTGGGCTCGCGGCGATTTCGGCG 9671906 29 100.0 32 ............................. CACGAGGGCCAGACCGAGGACCTGGCGACCCG 9671845 29 96.6 32 ......................C...... TCGTCGGTAGCTACGCCTTCTTGGCCTTGCGC 9671784 29 100.0 32 ............................. GTGTACGAGAACGTCGCGGGCACACTGCTGTT 9671723 29 100.0 32 ............................. CCCCCCGCCGCCCCGTCCCGTACGACGTCCTC 9671662 29 93.1 31 ...........................GA TATCTTGCGTGCGGCGCTCTTCCCCGAAGTG 9671602 29 100.0 32 ............................. TCCTCGCGTGCCCTCAGCGCGGTTCCCGACTC 9671541 29 100.0 32 ............................. CCGACGCCAGCCAGGAGACCGGCTTCCCCAAC 9671480 29 100.0 32 ............................. GCGGGAACGTCCTCACCGACGGGTGCGTAGCC 9671419 29 100.0 32 ............................. AAACAGGACGACGGCAAGTCCAAGCTGATCAT 9671358 29 100.0 32 ............................. ATGCGCGCCCTCCAGCACAGCTCCACCGCCAC 9671297 29 100.0 32 ............................. GCGGCTGAGTGTGCCGAGGACCGTCTCGACCG 9671236 29 100.0 32 ............................. GCGACGTCGGCGGTGGGGCGCATCAGGGCCTC 9671175 29 96.6 32 ..............C.............. TTCGACACCGGCGGGCAGTCCCTCGGTGATGC 9671114 29 100.0 32 ............................. CAGCCGGGCCGGTGGGGGCGGCTCTTCGGCCG 9671053 29 96.6 32 ....................A........ CGACCAGCCGAACATCGAGCATGACCGGCCAG 9670992 29 82.8 31 ............T..A.....A..G.G.. CGGACGTCGTGGCAGGTCACGTCTATACCGA 9670932 29 75.9 0 T........C.......AA..A..CG... | C [9670909] ========== ====== ====== ====== ============================= ================================ ================== 63 29 99.0 32 GTCGGCTCCGCGCGAGCGGAGGTGATCCG # Left flank : TCAGCCCGCAGCTCGGCGAACGCCTCCTCCACCTGCGCCTGGAACACCGGCGTGATCTTCCCCAGGTCATGCAGCCCCGCCCAGAACGCGAGCACCTGCCGCGCCTGAGCCACCGACAGCCCCAGCGCCTCCGCGATCCTCCCCCTCACCCGGTCGCCCAGCAGCACATCCCACAACTCGCCGAACACCGCCGCCGTGTCCAGCAGATGACAGATCACCGGATACCGGCACGGAAGCCCGCGCTCCTTGCCCCACAGCCGGACATCGACCAACGGACACCCCGGCACTGCCGCCTGACGCTTCATCATGCCGACAATCGATAGCACCCCCCACTGACAACACCTCCCCACCAGCACAAACCCCACCCCCGGCAGCACCCGACACCGTAAGGTCGACACCGTGAGACCTGACACGGGGCACCGGAACCCACATGCCGGACCGGACAAGCCACAATCGGCAAAGAAAATGCAAAGCGACTGAGAACGCCCAGGTCAGGAAGT # Right flank : AAGGCGCATCAGCCGTCGATGTAAGGAACCAACTCTGCGGGCGTGAGCGCCACAAGCCGACAGGTCGGCAACTCCAGAGGCTCCAGTACGAGAATTCGGACGGAGAATTCTTTGCCGCCATACTGCGGCAGGTGAAGACGCCGCGGTGAACTGGATACGGGATAGGTCACGGCCGGCAGGTCTGCGTCGTTCCACATTTTACGGGCGGTCGGATCGAGCCGCACTTTCTCGATTATCTCGTGGAGCCGTTCGTCGTCGGGCCATCGTTCCGCGTGCACCCGGAGTGCCGCCATCGAGGGCAGCGCCCAGGATTTCCGCCAGTCGATGAGCTGGGTGCGTGCTTCCGGGGAGGTCAGGACCCATTCCACGACGTTGGCCCCGTCGACCATCCACGGGAAGTACTCCTGAGCCTTCCGGTTGCAGGCGAGGAGGTCCCAGCAGTGGTTGCTGAGGTAGATCCCCCAGGTCGGACTCTGCTCGACGAGGGACAGAAGGGCCTG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCTCCGCGCGAGCGGAGGTGATCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTCCGCGCGAGCGGAGGTGATCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [18-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 9684352-9684809 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP060828.1 Streptomyces sp. CRXT-G-22 chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================ ================== 9684352 30 90.0 31 ...C.......A.................G ACAACCCTTGCATACGCCGCGAGTGTGTCGC 9684413 30 93.3 31 ...........A.................C CGTACCAGCTCGTGAACAGGCGGTCGTTGTA 9684474 30 100.0 31 .............................. TCTTGAGCTGGGCCTCGGGGAACTGGATGAC 9684535 30 90.0 31 ...C...T.....................G ACGCGGACCGCGCCGGACCGGCCGGTCAGGA 9684596 30 86.7 31 ...C...T...............A.....A CAGCGTTCGCGACCTGGCTGTTACACCTCCT 9684657 30 90.0 31 ...C...................C.....C CGTCGGGCACCGGAATGTCCAGCCGATCCAG 9684718 30 90.0 32 .....T...................C...G CGGGACATGCCACGCCCCACCCCGGAACCTGG 9684780 30 86.7 0 ........C.........T.....G....G | ========== ====== ====== ====== ============================== ================================ ================== 8 30 90.8 31 CTGTTCTCTGCGCGAGCGGAGGTGAACCGT # Left flank : CTCCTGCCCCGCATCGTCACCGACATCCAAAACCTCCTCGACCCCGACACCACCCACCAACCACCCGACCCCGAAGAACACCTCGTCGACCTCTGGGACCCCGTCACCGGCCCCATCCCCGGCGGCACCAACCACGCCACCCCACCCTGACACCCGCTGGGAGCCTCCCGATGACCTCCATGATCGCCATCTCCCTCACCGCCGTCCCCGACCACCTCCGCGGCGCCCTCACCCGCTGGCTCCTCGAAGTCACCCCCCACCTCTACGTCGGCACCGTCTCCGCCCGCGTCCGCGACGAACTCTGGTCCACCGTCACCGCCACCACCGCCGACGGCGTCTCCGTCCTCATCCACCCCACCGACAACGAACAAGGCTTCACCCTCCACACCACCGGCACCCAACGCCGCAACCCCATCGACTTCGACGGCCTCACCCTCATCTCCTACCAACCACAGGGCAAAGAAACCGCACAGCCCTTATAGAAGAGCAGGTCAGGGAGT # Right flank : GCTTTTGAGCGGATCGATGTCTGCTCTCCGCCCAGGCAGGGAGGAGCCACGGCAGGCCGAAAAGGGCATGATTTGCAGAGGTCCTTCAGCGACCAGCCAAGTCACCCTGTAGGCCGGAGGGTTGCAAGCGCGAGGTTCGCGGATGCAATCGCCTTGAGCTGCGTGCACACGCGTGCGCACCGGCCCTGGATCGATGGGGGCCGAGGCGGATCGAGCAGGGTCGAATAGGGTGCCAATGTCCGGCTCTCTGGAATAATCGCAGGTCAGAGGCGTCCCCGCCTCGGGTTCGACTCCCCTGGGATTCATCTCTCCGAAGCCTCCTTGTCCTGTGAAAGCGTTGATTTGGGAGGTTTTTCTGGTGGTCATCGGTGGGTGTAGTGGGTGTTATCTGGGACTTCGTGTGCGTGCCAGTCGGGGTTGTTCGGTGGTCGTTCCTGGGGGCTGAGGGTGTTGTTGCGGAATTGCTGCCGTTCCTCCGTGCCTGGGTTCCGTCCATAGGT # Questionable array : NO Score: 3.59 # Score Detail : 1:0, 2:3, 3:0, 4:0.54, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.29, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCTCTGCGCGAGCGGAGGTGAACCGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGCGAGCGGAGGTGAACCGG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.50,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //