Array 1 5612-3994 **** Predicted by CRISPRDetect 2.4 *** >NZ_VDFL01000007.1 Companilactobacillus salsicarnum strain TMW 1.2188 seq7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 5611 36 100.0 30 .................................... ACGATTTTTACAATGATTTACAAGAGATCA 5545 36 100.0 30 .................................... TTCACGATTTCTTGGTAAACATTGGAATTG 5479 36 100.0 30 .................................... TCCTTATCTTACTGATATTGCAATCAACAG 5413 36 100.0 30 .................................... TGCTATAGACTATTTACGATAGACCCTTGA 5347 36 97.2 29 .........A.......................... CGTTTAATTTTCTCATACGTGCAATGTCG 5282 36 100.0 30 .................................... CAAAAAAGTATAGACATTTAATATCCTAGC 5216 36 100.0 30 .................................... TAGAAAAGTATAGACATTTGATATTCTAGC 5150 36 100.0 30 .................................... ATTTAATGGCTCATTAGATGGAAAGAGCAA 5084 36 100.0 30 .................................... AAGTCCTCCACCATCTCGCAAGCCTCGGTA 5018 36 100.0 30 .................................... AAATGGTATTGAACTTTTTTTGTCATTTAA 4952 36 100.0 30 .................................... TTTCACTAACTCTATACTGTATAGCTGGTT 4886 36 100.0 30 .................................... TGGTACAGCAACCACCGAGGACTGGTAAAA 4820 36 100.0 30 .................................... GGTTTATCAGCTATTTCAATCCAATTATCA 4754 36 100.0 30 .................................... TGAATCCCATGTTCGGGATACATCACTTTT 4688 36 100.0 30 .................................... GTCATTGAAGAAATTAATTCTCCAGTTGCC 4622 36 100.0 30 .................................... CTTTTATTGCATCTTTTGGCATTTATACTT 4556 36 100.0 30 .................................... TCAGAACTCGCTGTTCCGCCAAACTCCGTA 4490 36 97.2 30 ......T............................. TTGGCAACAACATAACCATTTCCTCTAGGT 4424 36 100.0 30 .................................... ATCAAGACTATCAACATAACACTTAGGAAC 4358 36 100.0 30 .................................... GATCAAATTATAGTTAGATCAAATTAACCG 4292 36 97.2 30 ......C............................. TATGAGTTAATAGCCAATATGAAAAGACGT 4226 36 97.2 30 .......................C............ CTGCATTAACCTCATGCGTAGACTGGGTTT 4160 36 97.2 30 .......................C............ TTGGATTTTATCGTTGCCACCGTTCTTATC 4094 36 97.2 29 .......................C............ GTCGGACTCTACTATTGCTTGATCAACAC 4029 36 69.4 0 .......GA...T..T....A..C...C.T.A..GT | ========== ====== ====== ====== ==================================== ============================== ================== 25 36 98.1 30 GTTTTAGATTTAAGTCATCTCAATTACTTCAGAACC # Left flank : ACTACAGACTTATAGTATTAATTCTATACCGAATTTAAAACTTGTTTATAAGAAAATTGCACAGAATTCAAACGTGGAATTTAAAGATCTTTTTGAAAAACTGAATGTAGAGTTAAATGAGTTAGTGTTTGATACTAGTTGCTCTTTTGACGGTCCATTTGATTACGATAGCCTATCAACTTTCGAAAGTATATTAAAATTTAAAGCATTGAAATTTGATAGTGGAAACTGGCAAAACTACTATGATAAGATATTAGCGGTGATCAATTTCTACAAAGATTTTTCAGAAAAAAAGTTATTAATTCTACATGATTTACACAAATTACTAAATCTAAATCAGGTAAATGAAATGAATGATTATTTGAAATCCATCGAATTAACTCTTATAAGTTTCGAATCATACGATATGACATCTCGTACAGAAAATCTTAATTGCAAGGTTTATTCAATTGACGATGATCATATGAGATTTGATTATTAAAAGAATTTAATTTGGGACG # Right flank : CAGACATGAACTTTGTCTGACTTTTTTCGTATAGATATTTCCAGATTTTATAAGTTACAAAAACAAAAAAATCCATCATCCCCAAAAGGGACAACAGATTCATCAGTAAAATTAATTTTCTTTAGCTTTAGTAACAATATCATTGAATGAGAAAATCTCGTTGGCGATTTTTTCAGGTTGCTCTAACATTGCTGCATGTCCGGCACCTTCAATATCACGAATCTTAACATCTGGAACTCGTTCCAAACTGGCTTTGGCATCTTTGATTCCATCTTCACCAAGTATTTGATCCTCTGTTCCGTATAACAACAATGCTGGCTTAGGAAGTGCGCGCAATCGTTTGTTCATGGCCTTTTCTTCCAAGTATGCTGGAGCAATTTTCTGTAACTGCTTTGAAGTTTTACGTTCTACTTGTTTAGATGCTTCTTGGACGACTTTAGGATTGCTCAATGTTGATGTATCAAATCCTTTGGCAAAATACAATTTAGCTTTGACTTGAG # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATTTAAGTCATCTCAATTACTTCAGAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.30,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //