Array 1 4275449-4277577 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP053649.1 Xanthomonas axonopodis pv. vasculorum strain NCPPB 796 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================== ================== 4275449 31 100.0 35 ............................... CGAGAAGCCGCTGCGCGTTCGGCTGTCCAAGGGCC 4275515 31 100.0 35 ............................... ATGAGTGTGTCCCGGTTGGCTGATGTGGTTAGAAT 4275581 31 100.0 34 ............................... CCATCTGGGGTCAAGTAGTGCGAGCGCCCTAGCT 4275646 31 100.0 35 ............................... TTCCACACATTGTGCTCTGGATGGGTGTCATCCTG 4275712 31 100.0 34 ............................... CCAGTAGCTCTAACTTAGACTGTGGTAGCTGCTT 4275777 31 100.0 36 ............................... TTCCGTCTTACCCTCTCTCAGACAATACATGCACAG 4275844 31 100.0 35 ............................... ATTCCAGGCTGCTACATTCCCTGTCTGGCACTCTC 4275910 31 100.0 35 ............................... TCCATGTTCTGTGCATGTGTACACTCCCTAAGGTT 4275976 31 100.0 34 ............................... AGCAGAATGGAGTGTGTAGTGCTGTGGAACATTC 4276041 31 100.0 34 ............................... CAGGTGCCGGCGGACCTGGTGGAGCGTGTCAATG 4276106 31 100.0 34 ............................... TCCGACGTGGGCGAACTCACGCGCGAGCAAACAT 4276171 31 100.0 34 ............................... GAACAGTAGCCGCCGCCGGCAGGCTCGCCCCTGC 4276236 31 100.0 36 ............................... CAGTCGGTGCGCATCCGCTTCGCGGCAATGGATGTG 4276303 31 100.0 34 ............................... GATCGACATGATGGTGAGCCTTGGCTGGGCATTT 4276368 31 100.0 35 ............................... CTGGACGAGCAGCTGGCCGCTGGTCGCCTTGAGCA 4276434 31 100.0 34 ............................... CCGTCCTTGGGCAAGTTGGAGTTCTTCGAGGAAG 4276499 31 100.0 35 ............................... AGCGACGCAGCAACGGTCGCCAAAGCATCAACGAC 4276565 31 100.0 34 ............................... ACCAGCAGACCAACTACACCGGAGGTCGGTTGTC 4276630 31 100.0 34 ............................... ACCAGCAGACCAACTACACCGGAGGTCGGTTGTC 4276695 31 100.0 35 ............................... TCATCCGCCGTTTTGTACGTAGGATGCAGTAGCGT 4276761 31 100.0 35 ............................... AATTCAGGCAGGTACTGGGTATATTGTCCGCCCGG 4276827 31 100.0 35 ............................... GCCTTCGTCCAGGCCTTCACGCAGAAGCCGAGCCG 4276893 31 100.0 35 ............................... GCCTTCGTCCAGGCCTTCACGCAGAAGCCGAGCCG 4276959 31 100.0 35 ............................... TAGGTATCCCCTGAGAAACCTCCAGTTTGTAGGCG 4277025 31 100.0 34 ............................... CCCAGTACACTGTTACAACTGCGGTGAGCTACGG 4277090 31 100.0 34 ............................... CCCAGCATGAGTACACACAGTGCTCCTGGATCTG 4277155 31 100.0 35 ............................... CTTTAATCTACTGCTACCCAATACCAGAGGTAAGT 4277221 31 100.0 34 ............................... CCCAGCATGAGTACACACAGTGCTCCTGGATCTG 4277286 31 100.0 35 ............................... CCGTTCTGCTGCGGATAATGCAGAAGCAGCTACAA 4277352 31 100.0 33 ............................... CCAGAAGCAGGAGGAGGCACTTCTGCATCCAAC 4277416 31 100.0 34 ............................... TTTTCGGATCTACCCGACGCCCACAAGGCCGAGC 4277481 31 100.0 35 ............................... TGCTCCCACAATTCCAACCGGGCGACACCGGTACG 4277547 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ==================================== ================== 33 31 100.0 35 GTCGCGCCCTCACGGGCGCGTGGATTGAAAC # Left flank : GAAATGACGCGGCTCACGTCCCATGATGATTGTTGTCAGCTACGACGTCAGCACAAGCTCTCCGGGGGGCGAGAAGCGCCTGCGCAAGGTCGCCAAAGCCTGCCGTGACCGTGGCCAGCGCGTGCAGTTCTCGGTCTTCGAAATCGAGGTCGAACCTGCCCAATGGACTGAATTACGTCAGCAACTATGCGACCTGATCGACCCGACGCTGGACAGCCTGCGTTTCTATCACCTTGGCGCGAAATGGGAGGCCCGCGTGGAGCACGTCGGCGCCAAGCCCAGCCTGGACCTCAAAGGTCCATTGATTTTTTGACGCGAACCCCAAGCGCCCCCTAAAAACCGGGCAGGTTCGCACCGCACTCAAGCAACTGATTTCCAAAAAGAAAAGAAAATACACTGCGGATCCCCAGCTCCGCGTGGCGACTCCTCGACCGCCTTTCAGCAGGTTCGCGGAATTGCCCGTGTTTTAGCAACGATGACAAGCCCTTATGCTAAGGGGG # Right flank : CCTTCTCGGTCTGGCCCGCCCACACCGGGCTGAATGGCCAAGCAGGCCGCAGTGGTCTTAATCGACCGATGCAGTCGCTTAGTTGACCGTGATGGTCTGCGGCGTGCCTGCAGGCTTGCCGTCCACCATCACCTGGGCGGTGTAGGTGCCGGCCGGCCAGCCGTCGGGCTTGCTGAAGCGCATGTTGGTGGTTTCGGCGCCGCTGGTGGTCAGGTTGGCGCTCTGCTCGCCAGCCACTTGCCCGTCCTGGTAGGTGAGCTTGGCCGAGACCGGCACATTGCTCGCGCTGCCCTCGGTCTTGACTGACACGATGATGGTGTCCTTGCTGCCGACGCTGGCCGATGGCGTCACTGTCTTGTCCGCAGCGGCAACCGTGCCGACTGCAACGTTGGACACCGTGACGCCGGTGCCGGCCATCGCCGCGCCACTGGTGCTCGCCGCGCCGGTCGCGGTGCCTTGCGCAGCCTGATCGCTGGCCGGCGGTGTGGCCGCCGGGCCGG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCTCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCTCACGGGCGCGTGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [46.7-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.27,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //