Array 1 192512-191018 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAUVW010000006.1 Klebsiella pneumoniae strain UMB7783 NODE_6_length_192512_cov_4.993206, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 192511 29 96.6 32 ...G......................... GAAATTAATCGCCCGTCTTCGCAGTCCTGCAA 192450 29 100.0 32 ............................. GCCAGTAGTTTTATTTCGAAATGCATTTCATT 192389 29 100.0 32 ............................. TAACCCACCGCAATTACGCGAATTAAACCCCA 192328 29 100.0 32 ............................. TAACGTCGCGGTGCGTCATCTCATCGGCAGTG 192267 29 100.0 32 ............................. TTGAGTTCGGGTCACGCCGCCGGGGTTGAGAG 192206 29 100.0 32 ............................. GCCTTTTCCGTTTTGCCGAAGAGTGTTGCGAA 192145 29 100.0 32 ............................. GATTATGCAAAACGACTTAGAGCCATAAGAAA 192084 29 100.0 32 ............................. TTTTCGGAATTACTGCGAGCGAGAGAGTGTCG 192023 29 100.0 32 ............................. GCTGCGTTGCCGTATTTACTCGCAGCGGCGGC 191962 29 100.0 32 ............................. TAACAGACGTATCATTTATGTTTGCTTACTCT 191901 29 100.0 32 ............................. GAAGTTAGCGATTATTTTTTACTGGAGAAACA 191840 29 100.0 32 ............................. TGACAACCAGATCCGAAAATCCTGGAGCCGGG 191779 29 100.0 32 ............................. ATTACATCGTTTTCCGGGTTTCGTTTGAGCAA 191718 29 100.0 32 ............................. GAGGGGCCATGGAGCCGGTGTTGATTGCGTCC 191657 29 100.0 32 ............................. CGATTGTCGGTGGTTGTCTGCTGGTATCTGCT 191596 29 100.0 33 ............................. CGCCGGTCAGTGGTCAGGCAGGAAAAAAGCAGC 191534 29 100.0 32 ............................. GCGTTGTCGTCTAACCCGTCTAACCTGCGCGG 191473 29 100.0 32 ............................. CAGGGTCGCCGTATCCTTCGCCAGATGGCGGA 191412 29 100.0 32 ............................. TTACAAATCGCCTCGGGTGGTGCTCTGAAATA 191351 29 100.0 32 ............................. GAAATTCTGATTTTTTTACCGTGGATTTCCAC 191290 29 100.0 32 ............................. GCTATGGGAGTTAATGACATGGAACAGAAATT 191229 29 100.0 32 ............................. GCTCTTCTTCCTCCGCGAGTTCTGCATACGTG 191168 29 100.0 32 ............................. GATTCTAATTGACGTTGTAATAATCGTGTGTG 191107 29 100.0 32 ............................. ACTGATATCACCGAACTGGCTCGGGCCATGAA 191046 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 25 29 98.9 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : | # Right flank : GTCCACTAACGTTATCGATCCGGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 227002-227396 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAUVW010000002.1 Klebsiella pneumoniae strain UMB7783 NODE_2_length_227414_cov_5.110979, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 227002 29 100.0 32 ............................. CGATCGTCAATCTCTGGCAAGCGCTGAAAATT 227063 29 100.0 32 ............................. CCAAATGGGAGCATTTATCTTTTCGCCGGTCA 227124 29 100.0 32 ............................. AGACTAATTATATACACACTTAATCCTGAGTC 227185 29 100.0 32 ............................. CGCCGGTCAGTGGTCAGGCAGGAAAAAAGCAG 227246 29 100.0 32 ............................. TCATTTCTGACGCGAATGGCCGACATGCTGGG 227307 29 100.0 32 ............................. GAAATTAATCGCCCGTCTTCGCAGTCCTGCAA 227368 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 7 29 100.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GCCAGTAGTTTTATTTCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [76.7-18.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //