Array 1 235067-234305 **** Predicted by CRISPRDetect 2.4 *** >NZ_CTEN01000002.1 Streptococcus varani strain FF10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 235066 36 100.0 30 .................................... TCGCAGAGGAGGTAATTAATGGCAGAAGTA 235000 36 100.0 30 .................................... TATTACTGGATTAGCTTCCTGAAGGATGGT 234934 36 100.0 30 .................................... AAAACTTAGTGATGAACGCAAAGCAAAACT 234868 36 100.0 30 .................................... TTTGAGCAGAATATCAATGAGGTTGTGGCC 234802 36 100.0 30 .................................... TAGTTGGAACTACGGTTGTTAACAACGGTG 234736 36 100.0 30 .................................... CTTTAGTCTTTGGTAGTCTTGTATGATGTA 234670 36 100.0 30 .................................... CGGCACTGCGATACCGCCTAGAAGGGAGGT 234604 36 100.0 30 .................................... GTTACCAAGGATAGTATCTATCGTGGAAAT 234538 36 100.0 30 .................................... AATTTGAAGGTGGCGTATTACCGTCGTTGT 234472 36 100.0 30 .................................... TAGAACTCGACGTTGGTCTGTTCGTAGCCC 234406 36 100.0 30 .................................... GAGCTTCTTCGCGCTCGGCTACCACATCCT 234340 36 94.4 0 ..........................A........T | ========== ====== ====== ====== ==================================== ============================== ================== 12 36 99.5 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : GAAAATGACGACAGTTATTGGATTGAATTTCCTGATTTTAGTGGAGGAACGCAGGGAGACAACATAGAAGAAGGCATGAAGAATGCACGAGAAATGCTTGAGGGAGTTGTAGCATCATATTTGGATGAGGGACTTTCTCTGCCACATGCTAGTGATATTCAGAAAATAGGAGTTGATGATGGATTTGCAACTTTAATTCAAGTGGATCCTACACCCTACCTTAAAAATAATAAGGCCATTCGAAAAAATGTGACAGTTCCAGAATGGCTGGTTAGATTTGCTGATCGAGAGCATTTGAATTATTCTGAAATATTGACACAGGCACTGGAGAAAAAACTCCAAATTTAATGGGAAACCAATTTTAAAAAACCTCTAAAATGTTGATTTAAAGCGTTTTTTAGGGTATAATAGGTTCAAAGAACGGGAACTTCTCGAAACTGAAGTTAAGCTGAGACAAATGGCGCGATTACAAAATTTCGTGAGAAAAAATAATCTACGAG # Right flank : AATATGTATCTCCCTTAATTTGTTTTATACCTCAAAAACTTACGTTAAAATCACATTTAATAACACGAAATACCATTGCTTGAAATCCTTTTCCATGTTACAATAAAAGAAAAGCAAAGGCGGTTTCATATGGAAAAAACATTTTTTATGATTAAACCGGATGGGGTACAACGTGGTCTGATTGGTCACGTTCTTCATAGAATTGAGCGTCGTGGTTTTACCATCGAACGCTTAGAGATGAGACAGGCGACTCCTGAGCTCTTACGCCAGCATTATGCAGCCTTGGTGGATAAACCATTCTTTCCAGAAATCGAAGAATATATGACTTCGGGTCTAGTATTAGTTGGGGTTATGGTTGGGAATCGTGCCATTTCATCTTGGAGAACCATGATGGGAGCAACCAATCCAAAGGATGCTCTACCGGGAACCATTCGTGGTGACTATGGACAAGCACCTGGTGAATCTGGTGGAATTTTTAACGTCGTCCATGGTTCAGATTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //