Array 1 27915-26967 **** Predicted by CRISPRDetect 2.4 *** >NZ_JQCG01000007.1 Lactobacillus delbrueckii subsp. jakobsenii ZN7a-9 = DSM 26046 Scaffold7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================================================================================================================================== ================== 27914 36 100.0 30 .................................... TACATTGACTAGGTCATCCCACAACTTGGA 27848 36 100.0 30 .................................... ACGCCAATGGCAATCACAATTACCTTCTTG 27782 36 100.0 30 .................................... GCCACGCTATCCGCAAGGTTCGGGAATGCA 27716 36 100.0 31 .................................... CGGAATTGCCGTTGCTGTCGACATGGGCAAA 27649 36 100.0 30 .................................... TCTTACAAAAGCCCGAGGAGCTACCTCAGA 27583 36 100.0 30 .................................... TCGGCATCCCTGACGCTCAAACCCTTTACC 27517 36 100.0 30 .................................... AGATAGCGTTGACCCAGTAATTCCTGCTTT 27451 36 100.0 30 .................................... GACCTTCGAAAAGTTGTAGTCACGGTCTTC 27385 36 100.0 30 .................................... TTGCTGGGAAAGCCCCTAATGCCTTGATAC 27319 36 100.0 30 .................................... TCTAGCAAGAGAGAAGTGACAGACAAGCTT 27253 36 100.0 30 .................................... AGCTCTATTACTTTTGCTTCCGCTTACATC 27187 36 94.4 149 T..........C........................ GTTGTGTAGGTTCAAATCCTGTACTCTCCTTGTTTTGGAATATTTCCATTCAATGTTGTCAATTTTCCCGACGTATGTTGGGGGTGGCCATCATAATGGCCTAATACTAAGACGACAATTCTACTCATTCCACGTAGGTGGGGGTGATC 27002 36 75.0 0 ..........A..........C...G..GAC..AAG | ========== ====== ====== ====== ==================================== ===================================================================================================================================================== ================== 13 36 97.6 40 GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC # Left flank : CAGTGAATCTTTACTTCAAAAGTACATGACCAAATTAGCTAGTTATGTAGTTGATGAGCTAAGCGCAGATGGCAGAAACAGAATCATTACCTGCTATCGCGATTTACTAAATGCTGTTCAAGACGAGTTGCTTATGGAAGATTTGCCGCTTGAAATAAGTTTTGACACAGACTTGAAGAAACTCTTCAAATTTGGTGGTCTACACTTCAACAAGACACTCACTCGCGATCCATATGGTATAATCGAGACAGTACTTAGGATACATGACAGGTTAGATCTTAAGTCTACTGTTGTTTTTAGTAATGTAGCTCATTACTTAGATGCAGAACAGTTTAACGAAATATCCAAGCTGTGCTTAGAGCTAAAAAAGTCTATTATTTTTATCGAGTTTTGTAGCCATAAGGATCAGGTTGTATATGGTGATGCAAAATTCAGTTATATCGATGAAGACCTTGTTGATTGGTACTAGCCTTATATTAAAGCTGTGTTAAAAAATAACG # Right flank : TGCTTTTCATGATTGAGAAGCACTTTTTTCTGTTGAACACAACAACTTAAAAAAATGCTAAATCAAACGCTTCACCAAGCAAGCAGGAAAAGATTATAGTAAAATATACTGGTTATAAAAAAGCTGAGCCAAGCTCAGCATCCCCAAAACAAAACTTAGTTGAGGAGAATAAACACATGCAAGATATTTATATTGTTGCGGCCAAGCGAACTCCATTTGGCCGTTACCACAAGCAATTGGCTGACTTTTCCGCCATCGACCTGGGCCAAATCGCCCTGCGTGGCGCGTTAAAAGAAGCCGGCCTTGACGCCAAAGCCCTGGATGCTCTCTTCATGGGCAATGTCCTGTCTGCCGGCTTAGGCCAAAACATAGCCCGGCAAATTGCTTTAAACGCCGGGATGCGGCAAGACTCAGTCGCCGTGTCCATCAACGAAGTCTGCGGCTCCAGCCTCAAGGCTGCCCGCCTGGCTGAAGCCCAAATGTTAATCGGTGACCTGGGC # Questionable array : NO Score: 5.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:-0.91, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //