Array 1 3016-3466 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_BDBC01000092.1 Nocardia beijingensis NBRC 16342, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	============================	=================================	==================
      3016	    28	 100.0	    33	............................	CACCCCGTGCGGCAGCTCGGCCGACGGCGCGAC	
      3077	    28	 100.0	    33	............................	CGGCAATGGTGATCTGGCGGGCCATGACGCGCG	
      3138	    28	  96.4	    33	..............C.............	CCACGTGGGCACACCGGTGGGCCACACGGTGTC	
      3199	    28	  92.9	    33	.C............C.............	CAGAAATTGCTGTGCTTCTACGGTGCGAGGGGC	
      3260	    27	  92.9	    32	..............C-............	CCGCATCGGACGAACACATCGACCCGGTCGAC 	
      3319	    28	  85.7	    31	...T...T.....G.......G......	CGACGCCATCCGCGGGTCCATCACCCACAAG  	
      3378	    28	  78.6	    33	AG...T........C..A......G...	CGGTGAGGCATCGTGCGCCGCACACCAGACAAA	G [3380]
      3440	    27	  85.7	     0	.C............C..-.........G	|                                	
==========	======	======	======	============================	=================================	==================
         8	    28	  91.5	    33	GTGCTCCCCGCGCCTGCGGGGATGAGCC	                                 	       

# Left flank :   GGCAGTTCTCGGTGCGTCCGGCCGTGCCGGAGTACTGGCGTTGCACCCCGGCCGAGCGCAAACCCTTCTTCAGGAACCCGGTGTCATCGGCGATCAGCACCGCATCCCGGTCCCCGAGCCGCTCGGCCACATACGAGCGCACGTCGTCGCGGACTCCGTCGATGTCCCAATCCGCCCACCGCAGCAACCGCTGCATCCCGTCCGGGCTCACCTCACCGGCCCGCTCGGCCAGCGTCCACCCGTTCTTACGCTCGAGCCCCGCGACCAGCCCGGTCACGTACTCCCGGGCCCGGCCCCGCGGCCCCGACCGCGTGAACCGCCCACCGATCCTCTCGTGCAACGAATCCAACTCCACTGCAACAACATCCACCACCACACCAGCAAGCTACCGAACCGACTGCCGTTGCAGTACTAGAGCCGGACCGAGCCGGAGCAGTCGATCGCTCACGGAAGTGAATGAAAACCAGCTTGGCCAGCGGAGTACGTGCTGGTCAACAAGT
# Right flank :  GCGGCGTGCTGAGCGACCAAGCGATTGATGTAGAGGTCCGCAACGCACGCGGGGTTTCAATGTCAGCTGAAATCTGACCCTGTGCGCTGGCGCGGAACCAGAGGGTCGGTACCCAACTGGATGCGACTGGAGGTATGCGCCCAACCTGGACGCATCGGACTCACCCGCGCGGTGGCCAAGACGCACTACATCGATGTACCGGAGACCGTTCCGGACAATCGGGACGTCCTGGAACGCTGGGCTCGGGGCGACGAGGGCGAAAGTATGAGATTTTGACTGGCTCGGGTCGAATCCGGCCCCTCGCCACCGAACGAGAAAACCCCTTCCGACGCTGGTCGGAAGGGGTTTTCGTTGTCGGGCTGACAGGATTTGAACCTGCGACCACTTGACCCCCAGGTCGGTCCTGGGGCTGAAATTGCATGTCAGAGCCGCCATTAGGAAGTTTCGGATGGCTTCGATTGTGCTGGTCGGTGAGAGACGTTCATAGCGTGTGGTCCCGT

# Questionable array : NO	 Score: 5.30
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.57, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.47,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGCTCCCCGCGCCTGCGGGGATGAGCC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [2,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTGCTCCCCGCGCGTGCGGGGATGAGCC with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-12.70,-12.10] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [1-17] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [46.7-40.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0.37   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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