Array 1 68298-63765 **** Predicted by CRISPRDetect 2.4 *** >NZ_JPHZ01000031.1 Acinetobacter baumannii MRSN 3527 ctg7180000012063, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 68297 30 96.7 31 ............................C. TTAAAATAATTTTCCCCCACTAAGATACTAC 68236 30 93.3 30 ............................AA ACATCTTTATTGAAGCTCTTGCTGTATCTG 68176 30 96.7 30 ............................A. TATACCTAGCATCCCCTTTGAGTTCTTCTG 68116 30 96.7 30 .............................G ATTTAAAAGGAGCCAGCCATGAGTGAGTTT 68056 30 93.3 30 ............................AG AGGGGGTACGCAGATTGTGCGTACCCTTTT 67996 30 93.3 30 ............................CC ATTGCAAAGCCATTGCATCTGCAATGCCTT 67936 30 93.3 30 ............................GA CACACAACCCAAAAGATTGGCACGTTCAAG 67876 30 100.0 30 .............................. TCATCAGTAGCAGAGTTAGACCCTTCAATC 67816 30 100.0 30 .............................. GCCGCGTGGGTAATGAACTGCTTTTTGTAC 67756 30 100.0 30 .............................. GAAGATGAGCTAACAAATCAACGCCAACTT 67696 30 93.3 30 ............................AG TTGCACTCAATGGTTGTGAGTCCGCCATGT 67636 30 93.3 30 ............................GG TTATTGATCCAGCCATAAAAGAATTGCTCT 67576 30 93.3 30 ............................GC ATAAAAGTACAAACTAGGGTCAATGATGTA 67516 30 93.3 30 ............................AA AGGATTCTTGCTCAAACGCCGAGGTTATAA 67456 30 93.3 30 ............................AA TTGCTGTGACCGAGCCAAAGCGGAAATAAA 67396 30 96.7 30 .............................G CTTAACTGTTCTGTCACTCAATTGGCAGAA 67336 30 93.3 30 ............................AG TTGCACTCAATGGTTGTGAGTCCGCCATGT 67276 30 96.7 30 ............................G. TATGAAGTTGACGGTCTTGTCTCGCCTGAA 67216 30 96.7 30 ............................A. CTGGTAACCGTTTCGGTGATACCACTTGGA 67156 30 96.7 30 .............................G AGAAGCCGAAAGCAACACGAGCACATTGAA 67096 30 93.3 30 ............................CA AAAGTATTGCCGCAATGCCTTCTCAAATAC 67036 30 100.0 30 .............................. AAGTGCATCGATCGCATCCGCACCGCTAAT 66976 30 93.3 30 ............................AA GAATAAACGCATTTTAGATGGTATTGAAGG 66916 30 90.0 30 ......A.....................AA TGCGCCTCAGCTATCACAAAAGTCGAGCAA 66856 30 93.3 30 ............................GC AAGGCGACTGCAAAAAATACTTCTGGACTA 66796 30 93.3 30 ............................AC AAATTGATTATACATTAGCCAAATTGTAAA 66736 30 93.3 30 ............................AG AAGAAATGCAAGGCCGCAATCTGTCATTCA 66676 30 100.0 30 .............................. TTGAAAGGTAAAGAGCCTAAAAATCTTACA 66616 30 96.7 30 ............................A. GGATTAAAGACTGCTGAAACAAGAGCAGCT 66556 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 66496 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 66436 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 66376 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 66316 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 66256 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 66196 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 66136 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 66076 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 66016 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 65956 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 65896 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 65836 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 65776 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 65716 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 65656 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 65596 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 65536 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 65476 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 65416 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 65356 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 65296 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 65236 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 65176 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 65116 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 65056 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 64996 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 64936 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 64876 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 64816 30 100.0 30 .............................. CTCATCGTGAAGGTTTTGCAAATATGCCTT 64756 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 64696 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 64636 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 64575 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 64515 30 100.0 30 .............................. CAACTGTGTAACCAGATTTCGCTTTAAAAG 64455 30 96.7 30 ............................A. CAATGTAATGCTCAGGCGATGCCTTATCAT 64395 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 64335 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 64275 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 64215 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 64154 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 64094 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 64034 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 63974 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 63914 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 63854 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 63794 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 76 30 95.4 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.32 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.29, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [20-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //