Array 1 14690-21132 **** Predicted by CRISPRDetect 2.4 *** >NZ_FTMJ01000001.1 Aeromonas sp. RU39B, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 14690 28 100.0 32 ............................ CTGTGCATCGTGCTCGACACCCTGAGCCGGTT 14750 28 100.0 32 ............................ ACTGCTGCCTTTGCTTGTACGCACAGGCTTCT 14810 28 100.0 32 ............................ ATGACACAAGCTGACGCAAAGACACCCGCAAA 14870 28 100.0 32 ............................ ATCCCGAGCCGCAGCTCGGGGTGGTTTCGCTA 14930 28 100.0 33 ............................ AAGCCGCCTTTGAGCATCAGCGCCTTGCACAGG 14991 28 100.0 32 ............................ ACGCTCAACCTTGGTCGGTGGTTCCTGTACCC 15051 28 100.0 32 ............................ ATAGAGCGGGACAACGTAGTGGAACGCATAGC 15111 28 100.0 32 ............................ CGCCCCGTCCGTAATGTGGCCCTCGTAAAAGG 15171 28 100.0 32 ............................ GGCAGCGTTAGTGGCAAGTGTGACTTCAAGGC 15231 28 100.0 32 ............................ TGTCCGGCACCCTAAGCATCGACATGGGGGCC 15291 28 100.0 32 ............................ ACGGAGGAGCAGCACCTGATGCTGGTGGTGCC 15351 28 100.0 32 ............................ TGAATGGTGGGGGAGAAAGTCGGCGCCGTGTT 15411 28 100.0 32 ............................ GCCAGAAGGGGCTTGCCGGCATGGGTCTTGGC 15471 28 100.0 32 ............................ ACGCGGTCAAAGCTGGCCGGCTGGGTGGTGTT 15531 28 100.0 32 ............................ TTGGCCACGCGAGCTTCGAGGGTCTTGATGGC 15591 28 100.0 32 ............................ GACCAACCGGCCAGCACCGGCACCACCGAAAT 15651 28 100.0 32 ............................ GTCCACGGGCAGGCGTAATTCAAAGCCCATGA 15711 28 100.0 32 ............................ TGATCAAGGAGACGTGGTGGCAGTATTACACC 15771 28 100.0 32 ............................ CGCACGCTGTGCAGACAATCTGGAGCCCTTGG 15831 28 100.0 32 ............................ GGAAACTTGAGCATCCCAGGCACGTTCTCGAC 15891 28 100.0 32 ............................ CTCTGCACCCCATGCAGATGCGCTACCTGGCT 15951 28 100.0 32 ............................ CGTCTGGATTTGACCATCACCCCAATAATCTG 16011 28 100.0 32 ............................ AATGGTGGGTCAGGCTTGGGTGACCCCGAGAA 16071 28 100.0 32 ............................ CGATAGCGCCATCGTCGGCAATCAGACCTTGA 16131 28 100.0 32 ............................ AAGGCAATCGAGGTTGTTAGGAGAACTTATGA 16191 28 100.0 32 ............................ AGCCCCTCGGCTAGCGCCCTTGGCAGGCCCGT 16251 28 100.0 32 ............................ ACACTCTTAAAGGTGAAGGTGGCGGCGTCTTC 16311 28 100.0 32 ............................ AATGCCAAGCTGACCACAGAGCAGGTCGAAGC 16371 28 100.0 32 ............................ CTCATGAGCCTGCTGGAGCGTGACCCCGAGAT 16431 28 100.0 32 ............................ CGCTACTGCATGACCACCGCGTACAACGCCGA 16491 28 100.0 32 ............................ ACCGACCAAGGTTGAGCGTGGTGTGCCCCAAG 16551 28 100.0 32 ............................ AGTCCAGATAGCTCCCCCGTGATAAGGCCAAG 16611 28 100.0 32 ............................ ATGGGGACTATCCCGTGGGCCAAGCTGATTGC 16671 28 100.0 32 ............................ TGCTTGGCCAAGGCTTGCAGGTCTGGCTGTTC 16731 28 100.0 32 ............................ ATCACGTAGTCAGTGCGCCGAACGATCTTGCC 16791 28 100.0 32 ............................ CGTGAAGAGGACGGCATCAGCATCGGGGTGCT 16851 28 100.0 32 ............................ GAGATGCAGGAGTGGCTCGAGCGTGAGGTGTT 16911 28 100.0 32 ............................ CTGCTGGCCGGCTTTTGTAGCACGTCACTAGC 16971 28 100.0 32 ............................ ACTCGCTCAGTGGTGAAATCTGCGGCGGGGCG 17031 28 100.0 32 ............................ ATGACAGTTGCTCGGCTGTAACCATCGTCTTC 17091 28 100.0 32 ............................ TTGGCCCCGCTCTTTTCCAGCTCACTCTCCAC 17151 28 100.0 32 ............................ GGCAGCTGGATGCTGATTGCCGGTGTGGCGCA 17211 28 100.0 32 ............................ ACTGTGGCCGCTGGCACGTGGCAAATCGATTA 17271 28 100.0 32 ............................ TATGACGAGCTGGCCGATACCCGGCAAACGCT 17331 28 100.0 32 ............................ TGATCGCCATGTTTGCGCAGCACATGCAGCGG 17391 28 100.0 32 ............................ AGACCAGCAGGGACGGGAGTCAGGAACATCAC 17451 28 100.0 32 ............................ AGCGGCATCCCCCGTGTGCTGCCTGCCAGTGA 17511 28 100.0 32 ............................ AAGCTCGATGCGGTAGCCGGCAAAGTGGAAGC 17571 28 100.0 32 ............................ CCGAAGGATGGTACAGGGGACGCAGGCGAGGG 17631 28 100.0 32 ............................ GTGTGCTGTCTCGCCTGCTCCAGATACAGACG 17691 28 100.0 32 ............................ GCAAGGCGCTGGACGCCTACATGCGCGAACAG 17751 28 100.0 32 ............................ ACCCATCCCCCCAGTCAAAGGCTGACTTACCA 17811 28 100.0 32 ............................ CCACAGCGCAAAGCGGTTCTTCTCGCCATCGT 17871 28 100.0 32 ............................ ATCAGCATCAGGTACTGCTTCTCCGTGGGGTC 17931 28 100.0 32 ............................ CAAGGCGACCTCTTCTTTAAGGGCGGCCTCGC 17991 28 100.0 32 ............................ AAGACCAACTACTGGCCCCTGATTAAGGGCAA 18051 28 100.0 32 ............................ AATGATACGAGCAGCTTGACTTGCATGGGCTC 18111 28 100.0 32 ............................ AGAATGACCACCGTGTACCACCACAGCCGGTT 18171 28 100.0 32 ............................ ACATGCACAAAGTGGCTAGGGCGCTCGGGTTC 18231 28 100.0 32 ............................ CGCGACTCGTCCACCCTCGGCAGGCTGTTGAG 18291 28 100.0 32 ............................ AGACGATGAGCTGGGCGAACAGCTCGTTGCGA 18351 28 100.0 32 ............................ GTCACGGGTTAGGGTGTACTCGGGCTGGTACT 18411 28 100.0 32 ............................ CGCAAAAAGGCGATCGCGACAGACAGGGCAAA 18471 28 100.0 32 ............................ AGTTCCGTCTGCAATATCAGGAGGCATAAATG 18531 28 100.0 32 ............................ AGCACGCTAACGGCAGACACCGCCACCAACAT 18591 28 100.0 32 ............................ GGGGCGAGCCCCCGGCATGGTCTGCACCACGC 18651 28 100.0 32 ............................ ATGGACAACGCTGAAACCATCACCCTGCACAT 18711 28 100.0 32 ............................ CCGTAAAACAGGAACGCCGGGTAAAAATCTTT 18771 28 100.0 32 ............................ GAGAGGGGCTGGCGCAAAAGGGTGTAATCCTC 18831 28 100.0 32 ............................ AGCGTGGCGACGGAAGCCTTCGGCTTCATGGA 18891 28 100.0 32 ............................ AGAATTAATAGCAGTCGCAATATGCTGGCGTT 18951 28 100.0 32 ............................ ACATGGCCGGCTATATAGGCGGCAATGATCAG 19011 28 100.0 32 ............................ GAGCGTACCCCGCACCCTGGGCGGCTCGGGCC 19071 28 100.0 32 ............................ AGATAGTCGCCGCTCTCCAGCACCCCGATGCT 19131 28 100.0 32 ............................ CCAAGCCGCAGCCGAAGAATAAGGGCCAGACC 19191 28 100.0 32 ............................ CGCAGCAGTAAAGAACAAGCACTGCGCGATGA 19251 28 100.0 32 ............................ TATCAGATCCAGCCGGGCGATATCGTGGCCAT 19311 28 100.0 32 ............................ GGAAACTTGAGCATCCCAGGCACGTTCTCGAC 19371 28 100.0 32 ............................ ACCCAACGCCTCAAGCAAGGCTGGAACAAACT 19431 28 100.0 32 ............................ TATGACCTAGCGATGGCCAGCCGGATGCTGAA 19491 28 100.0 32 ............................ ACGCACCCCAGCACCGGCTTGGCCAGCTGTTC 19551 28 100.0 32 ............................ AAACCCGATGGTGGGGTAACCCTCCGTGCAGT 19611 28 100.0 32 ............................ GGCGACGACTAAGGTGACTTTGCTCATGGGTT 19671 28 100.0 32 ............................ GTCGATCAGCTGGCGCCCACCGATATCAACAC 19731 28 100.0 32 ............................ TCATACTGAACAATCCTCCGAATCTGCATTGC 19791 28 100.0 32 ............................ GCAGTCGAAGAACAAGGGCCAGACCGTGAAGT 19851 28 100.0 32 ............................ ACTCAAACGCGCATCGGCGGCGGCAGTTGCTT 19911 28 100.0 32 ............................ CCCTCGGCGCGCACATCGCCCAGCTGGCTGCC 19971 28 100.0 26 ............................ AACAAACCCCGATGCCGGCAGGCCGA 20025 28 100.0 32 ............................ GTGAGCAGATGCCCCGCTTTAAAGCCGCGTTT 20085 28 100.0 32 ............................ TGGCAGATGCGGCGATAGAGCCCCTCATTGAC 20145 28 100.0 32 ............................ TTTCGGGCAGGGAACCCTGCTCACCAACGGAG 20205 28 100.0 32 ............................ GTATGGTCCCATTGCTGCGGACAGCAGCATGC 20265 28 100.0 32 ............................ AGCCCCGGCTGCGCGTCCATCGCCAGATTGAA 20325 28 100.0 32 ............................ GCCTGTAGCTGGATGCTGGAGAAGCGCCAGCC 20385 28 100.0 32 ............................ TGTGCTTCTCACTGCATCCACGCGCACCGGCA 20445 28 100.0 32 ............................ TCGACCGAGATGGCCATCAGAGCACCCCTTTG 20505 28 100.0 32 ............................ CATGTGCCATGGGGAGCCGTTGCCTTGGGAGG 20565 28 100.0 32 ............................ GACGGTGACGCCGAGTTGTTTGTCAAAAAACA 20625 28 96.4 32 .................T.......... CTTGAGCGGGACGATGCCAAAGCAGTTCTGGG 20685 28 100.0 32 ............................ ATCCAGTTGGCCACCTACGGCGAGCTGTTTAG 20745 28 96.4 32 .....................C...... TTTGCCCAGACCAAGCAGCAGCTAGCTGGAGC 20805 28 96.4 32 A........................... ATGCGACCCATGCCGATCCACTCGGCATAACT 20865 28 100.0 32 ............................ GTGCTCCGCGATATTGCCTACCAGATCGACGA 20925 28 100.0 32 ............................ GGCTTTGTGGCGCTGGGGCAGTCCACATCCAA 20985 28 100.0 32 ............................ GCGACGCGATGCTGTTCCGGCGCCGCTACTTC 21045 28 100.0 32 ............................ CTCGGCAAGATGCGTTACGACATCAAGGTGAT 21105 28 96.4 0 ......................T..... | ========== ====== ====== ====== ============================ ================================= ================== 108 28 99.9 32 CCTCGCTGCCGCACAGGCAGCTCAGAAA # Left flank : AGCCGAACTGCTTCACCTCACCGAGGCGAACTGGTTGCAAGGGATGCGGGACTATATCCATCTTGGCGAACCGACTCAGGTTCCCCAACGTGTCAGTTATCGCGTGGTAAGAAGGGTGCAGGCCAAGAGTGCTCACAACAAGCGCCGCCGCTCGATAGCCAAAGGTTGGTTGAGCGAAGAGGAGGCGCTGGCTCGCATCCCCGACACTCAACAGAAGGCAATCACCCTGCCTTATGCCGAGATGCATAGCCTCTCAACCGCAAGCCGGATGCGCCTCTATATCGAGCACGGCCCTTTGCTCGATAAACCGGTCGCTGGGACATTCAACGCCTACGGATTAAGCGCGACGGCAACTATCCCCTGGTTCTGACCCTATTTTTCAGGGCGTAGCTAACTCATTGATTTTATGATGGGCTCTACGCCCTCTTTTCCAATTGGGGTTAACCGAGAAATCAGGGTAAGCTCTTTAACAATCAGATAGATAGCGATAGTATGTAACA # Right flank : AAGGAGGAAAAGGGGTAATCTGTATGGATGGATGAGCCGTGCCCCTGTGGTAGCGGCAAGAAGTACAAGCACTGTTGTCTGCACTGAGGTGTCGCGGCCAGCCGGTGCCTTCACATCGTAAGATGCAGGGCGTTAATCAGGCGCGCTAGCTGGTTGATAAGTGGCCCAAAATAAAAAAAGCACTTTCAAAAAATGAAAGTGCTTTTATTTTCAAAGCTTTAATGGATTGCGCTTAGTTCATGCCGTAGCGCTTGAGCTTCTTGCGCAGGGTACCACGGTTGATACCCATCATCACGGCGGCGCGGGTTTGGTTACCGCGGGTGTACTGCATGATCACGTCCAGCATGGGAGCTTCGACCTCGGAGAGGACCATATCGTACAGTTCCACCACTTCCTGACCGTTCAACTGGGCCAGGTAGTTACGCAGCGCCTGTTGCACAGAGTCACGCAGAGGACGCTGGGTCGGCTCGGCAGCGTGATTGTGAGTGGTCGTTACCAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTCGCTGCCGCACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CCTCGCTGCCGCACAGGCAGCTCAGAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //