Array 1 25083-27512 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABBGI010000010.1 Chryseobacterium antibioticum strain RP-3-3 contig10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 25083 47 93.6 30 ...A......A.........................G.......... ATTGGCGCAGTAAACACAGAAAACCGTTTA 25160 47 100.0 30 ............................................... AAACTGAAAATAAAGAAATAGCAGAAGCTC 25237 47 100.0 30 ............................................... AGGGCAGTTTTAGCACTTGGCGGAGCTATT 25314 47 100.0 30 ............................................... CTTGCGAAAATGATGAAAGAGCTTGCTACT 25391 47 100.0 30 ............................................... GACCTGTCTTTGTTACATCACCTTCAATCA 25468 46 97.9 30 ....................-.......................... CGTATTCGCTGTACAGCTCTGCCTCTGTTC 25544 47 100.0 30 ............................................... GTAAGGTTTCCCGAAAGATCGCCCAATACT 25621 47 100.0 30 ............................................... GTTCTATCAATTATCGAGGTTGGGATTTGC 25698 47 100.0 30 ............................................... GAATGGAGGGAAGAGCTTGCAAAGCATATG 25775 47 100.0 30 ............................................... GATTTCCGTTCATCAAGGCCATAGAGATCA 25852 47 100.0 30 ............................................... TAAAGGGTTTATGATAGAAACATTGAATCA 25929 47 100.0 30 ............................................... GTCGGGGTCGGCTACATTACCGTCTATATC 26006 47 100.0 30 ............................................... GTTTTAATCAGAATCGAAGAGCCAAAACCA 26083 47 100.0 29 ............................................... TCGAACCGCTGTAGATGGTGTTGCAGACC 26159 47 100.0 30 ............................................... CATCCATATGATCAAGGTCCTTTTGTCACA 26236 47 100.0 30 ............................................... TATTCAACACCGTTTTTAACAGCCAGCCAC 26313 47 100.0 30 ............................................... GCTAGCGTGCAGTGTTCTTTTAATGATCAA 26390 47 100.0 30 ............................................... CAAAAAACGTATGACAGTATCAATAATCCC 26467 47 100.0 30 ............................................... TTACAAAATGGTTAACAGTTTTGAAGAGCT 26544 47 100.0 29 ............................................... CATATAATTCTATATTAATAGAAAGGACA 26620 47 100.0 30 ............................................... ATTTGTTGCATATAATAAATTGGTTTTGCC 26697 47 100.0 30 ............................................... CATCCCCGGCCTCATAGCCTCGGATCATAA 26774 47 100.0 30 ............................................... TCCTCCCACTTAATATCTGGATCTATCTGT 26851 47 100.0 30 ............................................... CTATACCTTTTACAGGAACGAACTCCATAC 26928 47 100.0 30 ............................................... TTTGATAAAGATGGTCCTTATAAAAATGAT 27005 47 100.0 30 ............................................... TGGCCTTTTTGTGGCTCAATCATAATAATT 27082 47 100.0 30 ............................................... ACGAGTTTGAATACAAGCATTTAAGAAATA 27159 47 100.0 30 ............................................... GAAGGTTGGGAATTTAAAATGAAAACTACT 27236 47 100.0 30 ............................................... TGTTAAAAAATTAGAAGCGGGTAAATGGTA 27313 47 100.0 30 ............................................... ATGGAAAAAAACGTAAACATCGGACAATTA 27390 47 100.0 29 ............................................... TGTGCTGAAAGTTAAGCCTGAAGGCGTGG 27466 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 32 47 99.7 30 GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC # Left flank : GAATTCATATCGATCACAAAGTTTCCTGCAGAAAGCTGACCACCTTCAACGCTTAAATCTCCTGATTTTACGCTAAGTGTTCCCCAACGAGGAGCCATTCCTCCTTTGTGAAAAGCTTTCCAGTTTACTACAGAAGTCGCAACATCAACTGGCAATACTTCTCCTTTGCTTTCAGCTACCGTCTGCTCTGTAGCTGTAGACGCAGTACCTGCTGATTTATCTTTATTACATGATGCTGCAAGCAATCCTACTCCTACTAATGCAATTACACTAAGTTTTTTCATATTATTTTATTGTTTAAAAAATTTAATTAAAATTTTAAATTTGAAGAGTCAAAAGTATAAAAACCTTCTCAGATATTCCCTTAACATACATCAAGAAATCATAATTTTTATTTTTTACGCTCTATTGTGGAAGAGAAATAGTAAAAAATGGAGAATCTAAAGTATTTCATTGTATAGTAAAATTACTATCTTAATGATTGATTACAAATATATTAG # Right flank : CCTCAAAATTTAATCCATTGAAAATCAATGGATTTTTCTGTTATTTACGATTAAAAAATTAGAATAATTCGAGTTGTTGAAAGGTCGGTGGGGGTTCTTCTCTATTCCTGGCAAAGAAAATCTCAATATCTCCAAATTGCTTATCTGTAATAGACATGATGGCTACCTTCCCTGCTTTAGGCAACATATTTTTAACTCTTTTGATATGCACTTCAGCATTTTCCCGACTTGGACAATGCCTTACATACATTGAAAACTGAAACAACGTAAATCCGTCATCCAGCAACCGTTTTCTGAACAAATTAGCATCACGCATATTCGCTTTGGTTTCGGTTGGTAAATCATACAGTACTAACACCCACATAATCCGGTATGCATTAAACCTTTCGGCATTCATAAGAATTCGGGATAAGAAATCAGACGTTTTTCTCCCGTATAACATTTATAAAGCGAGGAAGCAGTTGTTTTCACTGCCACCAATAATGGTCTAGTCTTATCAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.78 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //