Array 1 175449-177820 **** Predicted by CRISPRDetect 2.4 *** >NZ_PQII01000017.1 Burkholderia gladioli strain Coa14 Burkholderia_gladioli_Contig-17_574923pb, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 175449 28 100.0 32 ............................ AGTCGATATCGTCGGGGATCATGCGTGCCACT 175509 28 100.0 32 ............................ AAGGGATGCAGGACGACAACGAGCACCACAAC 175569 28 100.0 32 ............................ AGAGCTTCACGTTGCCTTCCCAGGTGTGGTGC 175629 28 100.0 32 ............................ AGTGGTCAGTGGACTTCGAGATCGGCGGCATC 175689 28 100.0 32 ............................ GCATTGCGTGTTCTGTCTGCGTGACCTTGGGA 175749 28 100.0 32 ............................ ATGGCACTCTCGCCGACACACGCTTGTCCGAA 175809 28 100.0 32 ............................ GTCGACGTTGTCGTCCGCTGAGAAGGTGCTGC 175869 28 100.0 32 ............................ CGCGCGCCAACTGGGTAAGCAAGTGGGTATTC 175929 28 100.0 32 ............................ ATCCGGCGGAATTGAGCGCATAGCAAGCAGCC 175989 28 100.0 32 ............................ TGCGACGTCCGCGCCCGCCGGCCGGCGAAGTC 176049 28 100.0 32 ............................ AACTGAAACACGGATTCCAAGGCCTCAGCATT 176109 28 100.0 32 ............................ AGTAGTGGAATTGCGGCAGGTCGAGCAGCGCC 176169 28 100.0 32 ............................ TTCGCTGCAAGCTGATTGTTCAGGTTCTTCAT 176229 28 100.0 32 ............................ TGCACAAGCGCAGCCCGATCGCGGGCTATCTG 176289 28 100.0 32 ............................ CGTCGGCACGCTCACCAACATCGTCAAATGGC 176349 28 100.0 32 ............................ AAATGGCCTCCTGCGCGTGCGAAAGGGCGAAA 176409 28 100.0 32 ............................ CGGATCGCCCCGACTTCATGGGCGAATACGTG 176469 28 100.0 32 ............................ ATGCACAGGTCAAGGTAGGGATTCCCACTCGG 176529 28 100.0 32 ............................ TTGAACGCATCCAGAATCGCCTTGTTGTCGTT 176589 28 100.0 32 ............................ ACGGTCAGGATGGCGCTCCCGGCCGCGTAATT 176649 28 100.0 32 ............................ TTATCAACTGGCTGGAATGCTGGGGCATTCCG 176709 28 100.0 33 ............................ CATCGTGCCAAGCGCTCGAAGCCCTGGGGCTTC 176770 28 100.0 32 ............................ TTCACGGCGATGGGGGCCGTGGACACTGCTGC 176830 28 100.0 33 ............................ GTTGTGATCCAGCGCAGCCAGCGCGCCGGTGAT 176891 28 100.0 32 ............................ CGCTTCGTGCGCCGGAACGTCGCCGATTCCGC 176951 28 100.0 33 ............................ ATACCGGAAACTCGCCAGCCTTGAGCCTATAGA 177012 28 100.0 32 ............................ GCATCAAGATGCTGACCGGCATGGCCCGCGGC 177072 28 100.0 32 ............................ TATGAGTCGAATCGTGGGAGCAAACATTACGT 177132 28 100.0 32 ............................ GTTCGGCACCGCGACCTTGCCCAGCGCCGCGT 177192 28 100.0 32 ............................ ACCGAAGATAAGCAGGCATGGGGTTGGGGTGC 177252 28 96.4 32 ...........T................ TCGACATGATCGCGTTGAGCGAGTGCGGGGCA 177312 28 100.0 32 ............................ GCGATGAGCTGCTCGGTGAACCAGCCTGTTTC 177372 28 100.0 32 ............................ CCGCCGCACCGAGAAAGAACCCGCCGCGACAG 177432 28 100.0 32 ............................ TCGTCCAACTCGCCGGCATGCTCCCGCGCGAC 177492 28 100.0 32 ............................ CGATCGACAGCAGCATCACGCGTGCGGCCGGC 177552 28 96.4 32 ........................C... TTCGATGCAACTGACCTACTGGATTTGACAAT 177612 28 100.0 32 ............................ TCTCGCCCGCTACGGGAGAACGACATGCGCAC 177672 28 100.0 32 ............................ TGATTGAGGTAGGCCAGCGCCATGACCGCGCA 177732 28 100.0 32 ............................ ACCAGCAATCCGCGCTTGATCAACTCGACGAG 177792 28 92.9 0 ...........T.C.............. | T [177816] ========== ====== ====== ====== ============================ ================================= ================== 40 28 99.6 32 GTTCGCTGCCGCGTAGGCAGCTTAGAAA # Left flank : ATGGTTTGCATTCGCTGATGGCGCAGTCCTGGCTGCAGGGGATGCGGGATCACGTGGCGATCGCGACGCTGGCGCCCGTGCCGGACGGCGCGATGCATCTGGTCGTGCGACGACGGCAGTTCAAGACCAACGCGGACCGTCTGCGGCGGCGACGGATGCAGCGCAAAGGGGAAACGGCCGAGCAGGCTGCCGCGCATATTCCCGATTCCGTCGAGCGTCGGCCTGATCTTCCGTATGTGCGTCTACGCAGCGCGAGCACGGGACAGGTGTTTTGCCTCTTTGTCGAGCAGGGGGGCGCGGTGAGCGAGCAGGTGCCTGGGGCGTTCAATGTCTATGGGCTGAGCCAGGGGGCGACGGTGCCCTGGTTTTAACCCTTTTCTTGGGCTGATTTGGTTGGCCTTTGAAATCAATGGGTTAGCGAGAGGGTGTAAATTTGGGCGGTTTGCCCTTTCGCGGGTGTTTGTTGTTTGGAAACAAGGGGTTGGAGGGGGAAGGGGCTA # Right flank : ACTGCGATATGAAAGTCTGGCAGACAGGCAAGCTTTGCCTCCAGCGCGCGTGTTTTAAAATCGCAGCGCCAACGGCATCGTCACCGAAGTCGTTGATATGACGAGGCATCCTCGCAGACTGGCTCGAATACCGAGTCGTCCGCGATTCGCGCATGTTCGCACCCGATCGCGGCACCGGCAGCGCCACAAACCAGACAAGAGAGAGGACAACAGGCCGATGACATTCAATCGCAAGATGGCGCAGTGGACGGCAGCCGCATTGGCCATCACCTGCCTGCAGGTGACCAACGCGAACGCACAGACCTTGAACATACCGCTCGGCACGCCCGACGGATTCTCCGCATCATCGATCAAGAACGTGGGCCAGGACCGCTATTGCATCAGCGGCCGCGTGTACGACGACGCGGGGCCGAGCAATACGGCGATGGCCGTGCTGGTGGACGCCCGGCATCGTACCGTGTCGTGGAAGACCTCGATCCCGCATCCGCGCGACTACGCCG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCGCTGCCGCGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //