Array 1 15691-15061 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJGWA010000140.1 Limosilactobacillus reuteri strain GQ_1_7_1 scaffold140, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 15690 36 100.0 30 .................................... TTATCCCCGACAGGCTTTCTAAGTAGCCAT 15624 36 100.0 30 .................................... GATCAATTGCTACCCTGTCATCATCAGTAA 15558 36 100.0 30 .................................... GGATTATCAGCAATGTACGTTAATACAGTA 15492 36 100.0 30 .................................... AATTGCGCCGCACGTTCACCAAGCACATCT 15426 36 100.0 30 .................................... GCTAGAATTTACTATTTATTTTTGTGTACT 15360 36 100.0 30 .................................... ATTGTCATATCAAGTCCTGCTGCTGTATAA 15294 36 100.0 30 .................................... CGGCATTGTGGCAAGCTTTGCAGATAGTCT 15228 36 100.0 30 .................................... TGGTTAACTGTAGTTGAGGCCCTATTATTT 15162 36 100.0 30 .................................... GTACAGAATTTCTTCTATGACCGATACCCA 15096 36 88.9 0 ...........G............G.......T..T | ========== ====== ====== ====== ==================================== ============================== ================== 10 36 98.9 30 GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC # Left flank : GAATAATAATTTAACAACAATTTATTCAACGGAAATTGTAAAGTCAATAATAAAAAATTTAACAGAAGAGGATCGTCATTTGCTAGATGCTGAAGCACGTCGGCTTTATTCGAATGTTCAAGAAATTTTATTTATGACAGATTTACCGCTCGAAGTTCGTTACGATGGTGACATCAAACGATTATTAAATTATTGTAAGATTAAATTTTCACCATTAGTTCAGCAAAGCCCTTATGATATAATAAAAACAGATTTAAAGTTACATTTAGAATGTGCTGATAGTTCATGTGTTGGGTTAAGTAATGTCGCTAATTACCTAGATTCAGCTCAATTTAACGAACTACAACAACTAAACATTGAATTGAAAATTCCTGTTTTATTAATAGAATTCACAGAAATAGATAATCGTAAATACTATGGAAATGCGGATTTTTATTATATTGACAAGGATTTTGTTGATTGGAAGTTATAAACTATTAATTCAAAATTAGAAAATAATG # Right flank : TACACGTAAACTATAACAATCACAACGATGATATTTTTAGATATACTCCAACCTCGTTTTCCCCGCCAACTTCAGCGGGGCTTTTTCATTTTCTTTTCAAACTAGTGTATAATATTTACTAAACCCATTACTAAAAGAGGTGAAAAATGATGGCGACAATTAAAGAAATTGCGGAAAAATCAGGATATTCACCAGCAACGGTTTCGCGCCTTTTGAATAATGATCAAAATTTATCGATCAGTCCAAGCACCCGCAATAAGATCATGACGGTGGCTAATGAGCTTGGCTATTGGAACAACCACAAGAAAAACTCTCAGCAGCAACCAATCCGTCCTAATCTTGCTCTATTGTATCGGGTAAGCGGTGAAGAACAACTACAAGATGAATATTTTGCGTTTTTGCGAAATGCAATTATTAAAGAAGTCGATGAGGCGGGAGCGCAGGTTGAAATCTTTAGTAATATCAAGGATTTGATTGCGGTGGCTGATTCGTTCCAAGGA # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //