Array 1 1-996 **** Predicted by CRISPRDetect 2.4 *** >NZ_JUQY01000051.1 Alloscardovia omnicolens strain 842_GVAG 164_21675_373672_50+,...,8+, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================ ================== 1 36 100.0 28 .................................... TCCCCCTCAAAATTCTTCTTATTATTAT 65 36 100.0 28 .................................... AGAATCTTCTCCAATTCGTCATTGGTAA 129 36 100.0 28 .................................... CAAAGAATAAGCCGTAATGACGAGTACG 193 36 100.0 28 .................................... GAGCTATCTTACGAGTTCCAATATCGGT 257 36 100.0 28 .................................... AATGCAAGAAGAATAACCGCAAGAGCAG 321 36 100.0 28 .................................... TATCCTTTAATTTTTGAGACCTGTCATG 385 36 100.0 28 .................................... TATCCTTTAATTTTTGAGACCTGTCATG 449 36 100.0 28 .................................... TATCCTTTAATTTTTGAGACCTGTCATG 513 36 100.0 28 .................................... GTCTCGTCGTTGTCTTCGCCTTCGGTTA 577 36 100.0 28 .................................... AATCGAGACTAATACCTCTCTTCTTATT 641 36 100.0 28 .................................... CTAACGTATCCAACGAGGATATCTTTAC 705 36 100.0 28 .................................... AATCGTTCTGACGGTGAAATCCTGATAG 769 36 100.0 28 .................................... GTGGACGTATAAGCAACGCGGCAAAATG 833 36 100.0 28 .................................... GTATTACATTGTCGGGTATTGGTTTATA 897 36 100.0 28 .................................... GCATGAATAGGCAAACCGCATTCCACAT 961 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================ ================== 16 36 100.0 28 GCTGTGAATTAGCTTTCATCCTCTTTGGTAAAATAG # Left flank : | # Right flank : GAGCAATCTAATCAAAGGGGATGATTCCAGCATTTTCAAGGTTTTTCGCAATTAAAAAAGCATTAAAGTTCCCGGTGTTTCACCATCATTTTCTTCTTCTAGATTCACATATCGTAACGATTTAGACCACTGCTTATCTGTAATATGTAAGACTCGAATTTTGCCTCGCGGTGGCAAATTATCCTTAATTGTCCGAACTGTGGAACGATTTCCTTCAGCTGTTGGCGTATATCTTGCGTAGACAGAAAACTGAATCATGCAGTAACCCATATCGAGTAATAAATCTCTAAATACTACAGCAGCATGTCTTTGTTGCTTCGTTTGAACAGGAAGATCAAACATTACTAAACACCACATTCCCCCACTGTCCTCATCAACTTTCATGGTTAATCCTTAACGTATTGTGGAATTGCAATCTGCTGAATTTTATCTTCAACATATAGTGCATATTGTTGCGCAAAATCATTAATTTTACTTGGAATTGTTAGACCTTCTCCATT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGTGAATTAGCTTTCATCCTCTTTGGTAAAATAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.90,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 1-484 **** Predicted by CRISPRDetect 2.4 *** >NZ_JUQY01000064.1 Alloscardovia omnicolens strain 842_GVAG 177_677_13393_158+,...,18_, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================ ================== 1 36 100.0 28 .................................... GGGGGATAACTCTGGTAAGCAGGCTACG 65 36 100.0 28 .................................... ATGTTTGGTGTTGTCCTGTTTGTTCTTC 129 36 100.0 28 .................................... TCTAAATTCCTTACCTTCTCCCCCTGCA 193 36 100.0 28 .................................... GCAGGCTACGGATAAGCTCGATAATCTC 257 36 100.0 28 .................................... GTAGAGACCTTTTGCATAGTACGGCGGA 321 36 100.0 28 .................................... CTCAATTGGACAACGACATCAAAGATAC 385 36 100.0 28 .................................... CTTGGCGTGAGCAGACTATGAGCTTGAG 449 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================ ================== 8 36 100.0 29 CTATTTTACCAAAGAGGATGAAAGCTAATTCACAGC # Left flank : | # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTATGAGCTTGAGCTATTTTACCAAAGAGGATGAAAGCTAATTCACAGCATCGCTCTAGCGTTAGCGTGTCTACCTATCTATTTTACCAAAGAGGATGAAAGCTAATTCACAGC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTATTTTACCAAAGAGGATGAAAGCTAATTCACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.90,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 10563-9823 **** Predicted by CRISPRDetect 2.4 *** >NZ_JUQY01000061.1 Alloscardovia omnicolens strain 842_GVAG 174_10562_169304_137_,...,23+, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================ ================== 10562 36 100.0 28 .................................... AGTGATATCCTCGTTGGATATGTGAGAG 10498 36 100.0 28 .................................... CTAAAGCCTACTCCATTCTTCTTGAGAT 10434 36 100.0 28 .................................... ATGCTATTCCAACATTATTATTAGGCAT 10370 36 100.0 28 .................................... ATTAGCTGAGGCTAGTGGTATGGCTGGC 10306 36 100.0 28 .................................... TTCAGCCATGTTGATTATTGAGATGCGT 10242 36 100.0 28 .................................... GCTCTTCGCGCTTATCCCCTTACCTGAT 10178 36 100.0 28 .................................... GTCCTTTGGAGCTAAATACTCTGAGCCT 10114 36 100.0 28 .................................... CCTATTGTTTTTGTAACTGTTCCGTGTT 10050 36 97.2 28 .............................C...... CTGTTTTCGATAACTATATGCGCGTGCA 9986 36 100.0 28 .................................... CAGGCTGATCAGACGCCAACACGATAAC 9922 36 97.2 28 ...............A.................... TTTCGCTTTAGGGGTGTGCTCTTTTATT 9858 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================ ================== 12 36 99.5 28 CTATTTTACCAAAGAGGATGAAAGCTAATTCACAGC # Left flank : | # Right flank : TATTCTCGGCGGCTACAATGGTTAGGAACCACTGTATTAAAAGAAATCATAGCCAATTCGCAATGATAACCAAGATGTGATTGAGGACAAAATACGTTGTAACAAAGGGAATCTCCAATATCATTAGGAACTCATTGAATATGCTAGATAACAAATTGAGCGCTGTTTTGAATTGATACACTCATATGTATGCTTAGAACAGCGCAATTTATCAAATACTATTAAAGCTAACGTCCTTTGTGATTACCTTTACCAAGGCGATTAGCATCCCAGATCTCAATCGTCTCGTGTTTCCATCCTCGTGTACGCTCGATATAGACATCTAGTTCTGGAAGCTTGTAATTGCCCAGTGCACCTTTTGCCACGTTGAGGTACTCTGCAACCTCGGTAAAACTCATATATCTTTCTGCCATAATTGGCCTTCTCTTTTTCTCTTGAAATAGTACTACTATACATCGGATAGGAAGGAGGCAAGCGAATTTTCATTAGGTGCAGTACTT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTATTTTACCAAAGAGGATGAAAGCTAATTCACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.90,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //