Array 1 1103727-1101644 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP043924.1 Lactobacillus paragasseri strain NCK1347 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1103726 36 100.0 30 .................................... AATATGTATGGACGAAAGTCTTCTAGCCTG 1103660 36 100.0 30 .................................... TCTCTCGAAAGAAAAGTGTTGTCGTCAATT 1103594 36 100.0 30 .................................... GTTAAAGAAGGACTATCTGATGAAGAGACA 1103528 36 100.0 30 .................................... CATTGGCACATAATTAGGTGGTGTCGGGTT 1103462 36 100.0 30 .................................... TTACCTGTGAAACTACCGATAACAGCATCA 1103396 36 100.0 30 .................................... GGTGTAGGGGGACAATAGACACCCTGATTG 1103330 36 100.0 30 .................................... CCATAATCGTCAAACTCAATTGAGGCTGGA 1103264 36 100.0 30 .................................... TCCTTTGAAAGAAAAGTGTTGTCGTCAATC 1103198 36 100.0 30 .................................... TTTACGCACGACCAATTTTTCCGAAGCTTA 1103132 36 100.0 30 .................................... ATTACAAGCAGAAATGATGGCAAAGCCAAG 1103066 36 100.0 30 .................................... TTGCGTGGTCTGTTCAAAATTAAGCTCTGG 1103000 36 100.0 30 .................................... TCGTTTAAGCAAAATTCATAAGCTTTGGTA 1102934 36 100.0 30 .................................... AAAAATATCAGATAAGGTTCCATGGTCTTT 1102868 36 100.0 30 .................................... CATCACTAGCACAAGCTAATCAGTTGTTAA 1102802 36 100.0 30 .................................... ATAATAGAGCAAGGTTACGTCCTAATAGCA 1102736 36 100.0 30 .................................... TTAATGCCTGAATGGCAAGTAAGCTATGGA 1102670 36 100.0 30 .................................... CCAGTTATTGGAAGTTATGCCGGTTATGGT 1102604 36 100.0 30 .................................... ATGCTAGTCCACTTTATACCTTACTTTTAA 1102538 36 100.0 30 .................................... TTCCTAGTATGCTTACCACGATGATTGTAC 1102472 36 100.0 30 .................................... ATCATCATCAATAGTTACAACCTTGCCATT 1102406 36 100.0 30 .................................... TTTTTACCATGAAACTACGGATAAAATACA 1102340 36 100.0 30 .................................... TTTCTAGATCTAGATTAGTGTTGTCTTGTG 1102274 36 100.0 30 .................................... TATCTTTTAACTTAACAATATTTTCATAGT 1102208 36 100.0 30 .................................... TGTTGATCTCGATAATACTCCCATTCGCTG 1102142 36 100.0 30 .................................... AAGACTTCTTGGTATCCTTGGTCCATTTTT 1102076 36 100.0 30 .................................... TTAGTATAAATGCTACCCACCATTCAGCTG 1102010 36 100.0 30 .................................... GTAGTTGAAGAAAAGACTATCAAAGCCGAT 1101944 36 97.2 30 .................A.................. AACTTTTTTCAACTAATCACCACCTTAAAT 1101878 36 97.2 30 ....................T............... TAAATAACGAACTTGAACAAATCGGATTTA 1101812 36 100.0 30 .................................... GTATCTCCGCCACTTGCTACTTTTTTGTCA 1101746 36 100.0 30 .................................... AACAAGCGCCGGGATTAGGTGCGGCTTTGT 1101680 35 94.4 0 ..........................A......-.. | TA [1101650] ========== ====== ====== ====== ==================================== ============================== ================== 32 36 99.6 30 GTTTTAGATGGTTGTTAGATCAATAAGGTTTAGATC # Left flank : AATCAAAATATTTTTGACAAGTATATGCCCGTAATTATAAAAGAATATATTGAAGGGCTTAATGAAGCGGATCGTAATGAAATATTAAAAACATACCATAAACTAGAAGGGGTAATTCAAGATTCGTTGCTACTTGAAGATCTACCATTAGAACTTGAATTTAATGAAGACTTGAAGAAATTTTTAAAGTTAGAAAATCTACATTTAGATACTAAGTTTTTAGAAGAACCATATGCTATAATTGAATCGATCTTAAAAATACATCAAAATTATAATCTCCATTCTATACCTGTTACTTGTAATGTAGCTCATTACTTAAATTTAGCTCAGGTAGGGATGTTAAATGATCTGTTAAAAGAAATGAAGTTGAAATTAATTTTAATAGAATTCACATCTGCGGATTTTCTGGTTTTTCCAAAAGATGTTGATTATTTCTACATTGATCAAGATCTTGTTGATTGGTACTAACTGTCTGATTAAAAACTGATTATAAAATTTCG # Right flank : GTAATTACACTACTGGTCCATTGCTTTTGCAATGTGCCTTTTTTATTATCTTCCAAACCGTTTTTCACCCTCAGTGCAAAAGTCTATTTTAAATGTAAGTGCCTGTTTATAAGTATCAAGAAAAATAATATTAATAAATAATTTAAAAACGACTAAGATTGTTTTATTAGTATGTGGTTTAAGTGCATCATCAGGTTTTATGGCTGTTAACATGAGAAAAGCATCAAAGAAAGTTGGTTTAGATTATAAAATTCAAGTTTGCAGAGAAGCAGAATTTGGTGACTATGCAGATCAAATTGCTGCCTTAATGTTGGGTTTCTTACTTAAAGACGGAGTTTGGTGCGATTAAATTACAAGTACTTGACAAGGTAAAGTAATTTTAATGAAACTAGATTACTATTCAATTTCCATTTGATTTTATGGATTACATGAAATTAGACAAGCAAAGAATCATCGCGGATCTTTTCCTCAGGGCGCGGTATACTCATTTTCTAATATCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGGTTGTTAGATCAATAAGGTTTAGATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: R [matched GTTTTAGATGGTTGTTAGATCAATAAGGTTTAGATC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //