Array 1 2399-5430 **** Predicted by CRISPRDetect 2.4 *** >NZ_NXGU01000021.1 Acinetobacter baumannii strain Abau471 contig_00021, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 2399 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 2459 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 2519 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 2579 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 2639 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 2699 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 2759 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 2819 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 2879 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 2939 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 2999 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 3059 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 3119 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 3179 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 3239 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 3299 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 3359 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 3419 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 3479 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 3539 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 3599 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 3659 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 3719 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 3779 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 3839 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 3899 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 3959 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 4019 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 4079 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 4139 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 4199 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 4259 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 4319 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 4379 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 4440 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 4500 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 4560 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 4620 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 4680 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 4740 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 4800 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 4860 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 4921 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 4981 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 5041 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 5101 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 5161 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 5221 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 5281 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 5341 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 5401 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 51 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.36 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.32, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //