Array 1 259164-259431 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NBUT01000004.1 Proteus vulgaris strain CICC scaffold3, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	============================	================================	==================
    259164	    28	  96.4	    32	..........A.................	TGAGAAATCAACATTCCTTCATCGTCATTGCA	
    259224	    28	 100.0	    32	............................	TTAACCCTAAGATTGCCAACCGCAATAAAGGC	
    259284	    28	 100.0	    32	............................	TATGAGTGAATATCGTCCACTGGCAACCAAAA	
    259344	    28	  96.4	    32	.................T..........	CATAATCAAATCACCGAAAATAATAAGGTGAT	
    259404	    28	  92.9	     0	.........T.......T..........	|                               	
==========	======	======	======	============================	================================	==================
         5	    28	  97.1	    32	GTTCACTGCCGCATAGGCAGCTTAGAAA	                                	       

# Left flank :   GCAAGGGCGTGCAATGCAATGCTCCTCTCTTATTCACGTTATTATTGATTCAACGGAAAATACGATTAGTCGAGTGAGAGTGGGCGGAAAAGCGACAATGATAGGTTCGAAGATTATTACTCTTTAAATTACTTGCGGTATTTTATATCAAGTTATTCCTAATAGGCCCCAGTGTAAAAACTAGGGCCTTTGTATTTTAAGTATTTATATAAAAACGACGTATTTATTGCTTCTTAAAATTTTATTATTGTTCGCTATGTGATTTGATTTTTCATTAAATAGATTTTATGGCAGAAAATGCGTAGGTGGTTTTTGTGAAAGTACCCGGAACGTTGAACTTTGGTTTTGACTTAAGTATATTCAATAATTAACCCTTTTATTTTGTTCTTTAAAAACGATAACAAAAACAGATGGTTACATTTTGCTGTTTTAAGCAAGGTAAAAATAGCTAAATGTTGCTAACACCTTGCTGTATCTTGTTTTTCTATGACGATACTATT
# Right flank :  ATATAGAGGAGAGATTGTTTTTCAGGGTTAAGGGCTCACTGCATCCCGGATGTTTTATTTCCGTTCGTGTACAGATGCTAGAGCAATCCATTTATAACGTGAGAATGCGTGAGATGGAAAAGTTTCTTTTGGTACTAAAAAACTATAGAGAAAATAAAATTATTAAATATGAAGATAAAGCAAGGATATTTATTTGGTATATGGAAAATATACAGAAAAGAAACGCCACTATAGAAATAGCACTGCCTTTTTTAATTCAAGATTTTCGTAGTTATAGTTTAGGGAGTGATCTTTCAGATGATGAGATAAAAAGTACAATAAGGAAAGTTAAAGAGCATCTTATTCAAGCTGAAAATAGGTATAAAAAAACTAAAGGGTATGATAAGAGTTAATCAAAACACCAATAAGACACCAGAAATTGATAACTGATTGAATATATAATTCGATCACTGGCACTGCTTTATTTTTTCAATAAATTAGCCATTTCTGACATTCGTTTA

# Questionable array : NO	 Score: 5.83
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCACTGCCGCATAGGCAGCTTAGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [8,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-8.00,-7.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [1-3] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [70.0-58.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.92,0   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
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