Array 1 190441-196729 **** Predicted by CRISPRDetect 2.4 *** >NZ_WNKW01000002.1 Pseudoduganella danionis strain DSM 103461 NODE_2_length_752178_cov_48.889351_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 190441 30 100.0 36 .............................. CGCCTAATACGGCCTCCGTTCCCAGTGTCGGTGCGT 190507 30 100.0 36 .............................. ATTCTCAATGTCAACTGCAGATCGAATCGCAGAAGT 190573 30 100.0 35 .............................. TATAAATCCAATAAATTTCCCTTGATTGGGTCCGT 190638 30 100.0 36 .............................. CTATTTGATTCCAGACTAAAGTATGCCCACCTGAGT 190704 30 100.0 39 .............................. TTTGTTGGTAGCCATCTGTCTATTTAATAGCAATCTGGT 190773 30 100.0 35 .............................. AGGAGTGGGGCAATAACAGCACCGAGAGCAAGCGT 190838 30 100.0 37 .............................. TGATCCAGAACTCGGACTAAATGGACGATTCGAAGGT 190905 30 100.0 36 .............................. CGCGGCAGTATGCGTCAGATTAAACAACTCAAGCGT 190971 30 100.0 37 .............................. CTGCAGTGAATGAATGGGTGGAAAAATGGGAACAAGT 191038 30 100.0 37 .............................. ATCAGACGTGGTGCGGCCTCATTCACAGCGTTGAAGT 191105 30 100.0 38 .............................. GTACTGATTCCCGAACGGGATCGATGTCAGGATCATGT 191173 30 100.0 36 .............................. AAGTACCGGGCGAGCTAGTCACCATAGCGGCCGAGT 191239 30 100.0 36 .............................. AAAACGATGGTCGTCAAGCCTACGCTGCAGGCTAGT 191305 30 100.0 36 .............................. CCGTTGGGCCTGATGGGGGAAGCAGGGGCAGAAGGT 191371 30 100.0 37 .............................. CGAGAAACTTGCCCGCCAGTTGCCTCTTGGAACATGT 191438 30 100.0 37 .............................. GACTTCTTCCGCTTCTTCGTCATATCCGCATAAGCGT 191505 30 100.0 36 .............................. TCCGCTCTGTTGGTACAGGTTTGCCACCATGCGAGT 191571 30 100.0 36 .............................. CTGCGCAATATCTCGTGCGCACGGCCAGCCTCGTGT 191637 30 100.0 37 .............................. TGTGTATTTGGCGTTAGCCGCTCCGCTTGCAGGGCGT 191704 30 100.0 36 .............................. CAGCCTATCCATGATCGTGAATTCGGTGCTGTCGGT 191770 30 100.0 37 .............................. CTCCGCATGGCTTGCAATGACCGTCTAGCCACTGTGT 191837 30 100.0 36 .............................. CATAGCCGAAGTCATACGACACATTTACCTGCGCGT 191903 30 100.0 37 .............................. AAGCCTATCGCCAAGAACCAAGGCTGCGTGTTCGTGT 191970 30 100.0 36 .............................. TGCATAGCCGCCGCAAGCTGTGCGTTGCGCTCACGT 192036 30 100.0 36 .............................. TTGGCGGAGCCGTCGCACCATCTGGATAAACGACGT 192102 30 100.0 37 .............................. TAACGTAACAGCACGTGTCTCATGGCCGCATCAAAGT 192169 30 100.0 37 .............................. TATCTGCTGATTAGCAAGAAGAACACGAAGTCCACGT 192236 30 100.0 36 .............................. CCTGCCCTCTCGCGTAGCCCATTCATTGACCATGGT 192302 30 100.0 36 .............................. ATCACCGTAGCGCCTGACCGCCTCGCAGACCTGAGT 192368 30 100.0 37 .............................. CTTCTGCGCCTCAAGATGATTTACGTTTCGGGCGGGT 192435 30 100.0 37 .............................. AACAATCCAGCTATGGACTTGTATTGCCTATTGTAGT 192502 30 100.0 36 .............................. TTGCTACCTGACGAGGTGCCCGAAGGTCCATCGGGT 192568 30 100.0 35 .............................. TTCTTTACGCCTGTGCATGGGTTCTCGTTTGACGT 192633 30 100.0 37 .............................. CGATATGAATAGCCTGACCACATTGTGTTATGTCGGT 192700 30 100.0 38 .............................. CCGATAACGTGACCGTCGGACCGATCTGTTTACCTGGT 192768 30 100.0 38 .............................. CCTTCGATTCCACGTGAATCCGATATGCCTCGGAACGT 192836 30 100.0 38 .............................. CGCACGTGTAGGGATCGATGTGGAACTTGGACGAGCGT 192904 30 100.0 36 .............................. CTTCGTAGTCTCCGATGGGTTTGCGGCCAACTCGGT 192970 30 100.0 35 .............................. TCGGCGTCGGTACGGGCTTCTTCGACCGCGCGGGT 193035 30 100.0 36 .............................. TCGCATAACTTCAATATCGCGCCGGGTAGTGCTCGT 193101 30 100.0 36 .............................. CTCGTAAAGCTCATGGAACTTACGGTGCACGTCCGT 193167 30 100.0 37 .............................. TTCTGCGGGCGGCCAAACCCGCTAGACGAATGCCCGT 193234 30 100.0 36 .............................. CTTCTACGCCTGATTGCAGTCGCGTCCCGTCAAAGT 193300 30 100.0 41 .............................. AAAAGTCATTGATGGCGTCAAAGGTGGCGGCGTCTCCATGT 193371 30 100.0 35 .............................. AAAATCTATGGAATCCTTTTCAAATCGGACGCGGT 193436 30 100.0 36 .............................. TGCATCGAACTGTCCGAAGTTATGAGCCGCCCAAGT 193502 30 100.0 39 .............................. AGCGTCGCCCACGTGATTACCTCCAGCGCATCAGAACGT 193571 30 100.0 37 .............................. CTATCAAACGCCACGCTAGTGCATGTGGGATGGCTGT 193638 30 100.0 37 .............................. CTTGAGGCGGCGCACTTCGTCAATGAAGTAGGCGAGT 193705 30 100.0 36 .............................. ATCTTCCAGCCGCTGAAAAGGTTGATCGTCGCAGGT 193771 30 100.0 36 .............................. CTGTGCCCGCTTTTTGGCGTATAGATCACGGTCCGT 193837 30 100.0 35 .............................. CCTGGTGGATCGTCATTTTTAGCGGTTTCCAGTGT 193902 30 100.0 35 .............................. AATCATCATCAGCAATAACAGCTGGCCGGTAAGGT 193967 30 100.0 36 .............................. TTTGCCAGTCTGGTGATAGCCTCGTGGCGCGTGAGT 194033 30 100.0 38 .............................. TCATACAGCGACAATTTTCAGGTGCCCGCTGGGGTAGT 194101 30 100.0 35 .............................. CGCCCTCGCCGCCCAGCCAGCCACGCCTGCGGAGT 194166 30 100.0 40 .............................. CTGATCCACCCCGCCCACGTCTGCAGGCATGGCTGGCTGT 194236 30 100.0 36 .............................. CTGTGCAGCGCGAAATACTGCCCTGCGCATCCTAGT 194302 30 100.0 35 .............................. TGCGTGAGGCCGTGGCGATGGCCAATCGAGCCGGT 194367 30 100.0 38 .............................. CAACTCGGCTTTCAGGCGTTGCGTCTCTCCATTCACGT 194435 30 100.0 39 .............................. CGATCGGCATCTGCACGCCGCTGGCCGAGATGTTCTGGT 194504 30 100.0 37 .............................. ATAATCAAGGTTCCGCTGGTACTGATTACCTGACCGT 194571 30 100.0 38 .............................. ACCCAAAGCAATGAGGTCCCGATGCCGCCAAGCGATGT 194639 30 100.0 35 .............................. ATGTCGGAAGTGGATCCCGCTAAAATCTGTCCAGT 194704 30 100.0 35 .............................. ATATGCGCCGAGTCGTAGCCGACACCCGGCAGCGT 194769 30 100.0 36 .............................. CGAGCGCATCGAGCAGCGGGAGGTGGCAAAGGTAGT 194835 30 100.0 37 .............................. TGATGCATTTGGCCTTATGTGTGTAGCCCATGAGCGT 194902 30 100.0 37 .............................. ACTGCAGCCGCACGGTAGGTGCTGCAGCATGATTAGT 194969 30 100.0 36 .............................. CACGCCACATCGTTCAGTATGACCACATGCGGGCGT 195035 30 100.0 37 .............................. TCCGCGATTGCGCGAGAACGGGTTAAACGTGTGGTGT 195102 30 100.0 36 .............................. TTCAGCGATCCAATGGACCCCAAGACGCAGCAGCGT 195168 30 100.0 36 .............................. TCCATCGGGTTCTATCAAGTCTAATGGGTCGCTCGT 195234 30 100.0 36 .............................. CGCTACGCTTAGGAGTTACGGTCTTTTTAAACGCGT 195300 30 100.0 37 .............................. ACGCAAAGGGCTACGATCAGGCCTATGTAGATGCCGT 195367 30 100.0 36 .............................. TGCGGAATTGGCAAAACAAAATGCTTGATGCGGGGT 195433 30 100.0 37 .............................. ATGGCACCAAAGCAAAATCGACCGACCCGACAACCGT 195500 30 100.0 38 .............................. TCTAGTTGGTTCGTCGTTGGAATACCGGAATAAAAAGT 195568 30 100.0 36 .............................. ACGATATCGCGCCGCATCCTGCTGCACCGCTGGCGT 195634 30 100.0 36 .............................. CTCTATAAGGATCCTGATGATAACTATGTGGAAAGT 195700 30 100.0 38 .............................. TAGCGCTGGAGCCGCAGATGTATCAGCTGATGACACGT 195768 30 100.0 37 .............................. ATTTCAGTGGCGTCGGATTTTTCATCCATCGCCTGGT 195835 30 100.0 37 .............................. CATTGCAGCTACATCATTGTAGCTGTCAGGGTAGCGT 195902 30 100.0 36 .............................. ATAGTCGTGACGACATAATCGCGCCATTGAACAAGT 195968 30 100.0 37 .............................. TGGCTTATGTTCCAGCGGTAGCGCTTGAGGCATTCGT 196035 30 100.0 38 .............................. GCCATGAGTTCGTTGCATTTCTGCTCGTCAGTGCGCGT 196103 30 100.0 36 .............................. CGTGTAAGCCCGACGCCCCCAGCGGTCAGGCAAAGT 196169 30 100.0 37 .............................. AGCAAGTCGATTGCGAACTGGCGCTATCATGTGCAGT 196236 30 100.0 36 .............................. TGCGGTTGCCGCTCCTCCACTCAGGCCGGCGCCGGT 196302 30 100.0 37 .............................. CTTGACGATCAGCCTACCAAGATTTATCGGGTGGCGT 196369 30 100.0 37 .............................. CGCACCCTGAAGGCAGAACACCCGGCTATTCAGATGT 196436 30 100.0 36 .............................. AGGTCAATCTCGGTGAAGAACCGGCGATCCGGCAGT 196502 30 96.7 36 ...................C.......... GCCAGGTTACGCGAGCTAATGTCGACCATCTTGTGT 196568 30 96.7 36 ........A..................... TGCGCCTGTGCTGGCTGCGCTGCCGGCAACGTGGAG 196634 30 90.0 36 ..........GA......A........... TCTATGGCGGCGATGGGGGGAGAGGATGGTGGATGT 196700 30 86.7 0 .....T....GA.................T | ========== ====== ====== ====== ============================== ========================================= ================== 95 30 99.7 37 CGCGCCCCGCACGGGCGCGTGGATTGAAAC # Left flank : CTGGAAATGAATGAAATAGCGATATGATGGTATTGGTAAGTTATGACGTTCGCGTAAGTGATCCCGGCGGCGCTAGAAGGCTGAGGCGGCTCGCTCGCGCATGCCTTGATTTTGGGCAGAGAGCACAATATTCAGTATTTGAGTTAGAGGTAGATCAGGCGCAATGGGTGGTGGTTAAGCGGCGCCTCTCTGAAATTATTGATCCTGAATGCGATAGTTTACGATTCTATTATCTGGGTCGCAATTGGTCATCAAAAGTTGAGCACATCGGTGCAAAGCCGTTGTTGGACCTGAATGGTCCTCTTGTAATGTAGCTATTCTCTGCGCGAACCCACAATGATCTGAGCTGAGGAGTGCGGTTCGCGCGTCCATATCTTATTGATTTTCTGAAGCATTCCCGTTCGAAACTATCCGGGAGTAAAAAAACTGCGACGCTGCTGTGGCGTTCGCGGGATGACGAAGTTTTTTTCGTTCGATACAATGACTTACAGAAACACAGT # Right flank : TCCATATCACTCGCCAGTTTCTGCACCCGCTCCACATGATGCCGACGATCAGGGTGGTATCTAGGTCGCCTTAATGTGCCGTGTAGATGCGTGGATCAAATATTTTTAGCCGCAATATGTGGTTGATAAAAATACTCCCCTTTTCACTAGTTCAATGTTCAAGGTGCGGACGCTGAATTTGTTCGCTGTTGGCAAGCAGACGTCGATATTATTAAAAAGGCAATCCATGCTATGGGAATATGCGATCATCTCCGTAGAGATATAGACGCGCATCAGCCCGTTAATTCATAGCTAGTCCGCGTGCATTGGTGGAACTGCGGTATCATTACATGTCCTGATCTCCCCGCTAATCCCCGCCTAAAGCTTTTATCCTCCCGCCTCAGTGTTGCCGATTTGGCACTGCCATGTTGTCGCGATGCAACTATGTGCAATTAATTCAGCATAGCAAATTCGCCAGAAACCCATGTGCATACGTGAAGTAGCACTTTCACTGTCCGGCA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGCGCCCCGCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CGCGCCCCGCACGGGGCGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.80,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //