Array 1 107310-109777 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP066014.1 Anaerococcus vaginalis strain FDAARGOS_988 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================== ================== 107310 30 100.0 37 .............................. GATAGAGAATATAAAAATTTTAAGTTGTCTGGTGCTA 107377 30 100.0 35 .............................. CTTGATAGACAGATAAGAAATATAGTTGAATATCA 107442 30 100.0 35 .............................. ATAATAATTCTTAAAATTAGATCTAAACTTTCTGA 107507 30 100.0 35 .............................. AGGGTTGCTTTGCAACCCCTTAGGGGCTTGCCCTT 107572 30 100.0 36 .............................. GCCGTTTTAAGAAAGATTGAGGCGATAGAATGATAT 107638 30 100.0 36 .............................. TGTTTCTGCTCTTGATATTTCTGTTGGTAATATTAA 107704 30 100.0 35 .............................. TCAAGAGCTGAAACCCTATTATCAATATTAACAAG 107769 30 100.0 36 .............................. ATAAGTCCAGAAAAGACGCTTTAGAGTTTGATATTT 107835 30 100.0 36 .............................. AGTATTATGAATGATTTGATTAAAAAGAGGAAAGAA 107901 30 100.0 36 .............................. ATTAGTTTATTTAAGACGAAAGCTGATACGATCCAA 107967 30 100.0 36 .............................. TAGTGGAAGAAGAACACATCCTATAACCAAGATAGC 108033 30 100.0 36 .............................. AACTGAAATGGGTAAAAGATTAGGTATTCCTACTTC 108099 30 100.0 37 .............................. AGTTCAAATTCGTCATTTTTATAAACTGCATATCCGT 108166 30 100.0 36 .............................. TTTTACAACATTTAGCCACGCATAAGTAATAGCAAC 108232 30 100.0 36 .............................. TCAATATTGGTTATATTGTTATAAGCCTTAGACTTA 108298 30 100.0 37 .............................. TTCTAGGATAAATACCAGAGCCAACCCCATTGAAATA 108365 30 100.0 36 .............................. TCAATTATATTACCATTTTCATCATAATATAACTCA 108431 30 100.0 36 .............................. TGGAGCAGCGTTACTAAAATTTATTCCTCTTAGATC 108497 30 100.0 35 .............................. AGGGATTATTTATCTCATTCAGAACGGTTGAAATT 108562 30 100.0 37 .............................. AAATCAAATAAATCACAATAATCATCATTATAAGACA 108629 30 100.0 36 .............................. CATAAACTTTATAATAATAAAAAATTAGATTATTTA 108695 30 100.0 35 .............................. ATTCCTGCAAGTATAACTAATGCTATTGCTCCAGT 108760 30 100.0 34 .............................. TATTTAAGACAGCGTCAGATTTGGGAAGATAAAA 108824 30 100.0 36 .............................. TATTGCTGTTAATAAGTCTTATTTTACGGATACTAA 108890 30 100.0 34 .............................. CAGGACAGTTTCTTTTCTTCCTGCTCATATTCTT 108954 30 96.7 36 ................A............. ATGAAACATTTTAATTTTTAACATTTCAATACGTCT 109020 30 96.7 42 ................A............. TCTAATAATTCAACTTTATTTATAAGTCTTTTTTCAATTCTT 109092 30 96.7 35 ................A............. AATATATAGACCACCCAGTAAAATCATTATAAGTA 109157 30 96.7 37 ................A............. TTAACATTTACAGTTTTTGTTACTGTTTTAGTTGTTT 109224 30 96.7 37 ................A............. ATGCAAATTTAATTGCATATCCAGAAAAAAAAACTCA 109291 30 96.7 36 ................A............. ATAATCGGACAAAAACCAAAGTAATGATGATATTCC 109357 30 93.3 35 ................A........A.... CTAAATAACTTAAAAGTAAATGATGGAGCTTTTCC 109422 30 96.7 33 ................A............. ACTTTAAAATTTCAATAATTTCACTGTATGAAA 109485 30 96.7 36 ................A............. ATCTTTCTTCCATCTAACATTTCAAAAACTTGACTT 109551 30 96.7 35 ................A............. GAAGAATATAAATTAAATATTTTAAAAGCATTTAA 109616 30 90.0 36 .....A..G.......A............. AAAGGCAAAGAAAATGGAAATTTACGAGGAAGAGAT 109682 30 90.0 36 .....A..G.......A............. TAGTCCATATGATAAACTCCAATTTTATGAATCATA 109748 30 86.7 0 ........A......A....A.......G. | ========== ====== ====== ====== ============================== ========================================== ================== 38 30 98.2 36 GTTGATTATTAACATTTGATGTATTGAAAT # Left flank : ATAAAGCTAGATTGCTATAAATTAATAAAATATATACTAGAAGACAAAGAATTCGAACCCTATTTATTAGAAAGGAAATATTGATGGGGAAAAATTATAATTATGCATTTCTATTCTACGATGTTGGAGAAAAAAGAGTAAACAAAGTCTTTAAAGTCTGCAAAAAATATTTAACTCACCACCAAAATTCAGTATTTAGAGGAGAAATAAGCCCGTCAAAAATTATTGCTCTAAAAAGAGAAATTAAAAAAATAATAAAAAAAGAAGAAGACTTTGTAACAATAATAAAAATGTATAACAAAGAATCCTTTGAAGAAGAAACTATAGGAAAATACAAATCAATAGAAGAAGACCTAATCATATAAATACCAGCAAAAACAAAAGAATTTGAAAAAATAAAGAAAAGAAAAAAATAGAAATAGCTGGTAAAAAATCAAAGAATCTCATAAAATGGGTAATATATTGATAGGATGTATATTTAAAATGTGCATTTTATATTG # Right flank : TGAACTTTTCACTATATAGTTTAATTAAATATATGACATTGTATATTACTTGAAATTTTATTAAAGGAGATATTATGAATTTTATTGAACTTGTGAAGAATCGTTATTCTTGTAAAAATTTTAGTGACAAAAAAGTTGAAAAGGAGAAGCTTGATATTATTCTAGAAGCGGGCAGGCTTGCGCCTACTGCTAAGAACAATCAGATTCAAAGAATTTACGTTGTAAAATCAAATGATGCTCTTATAAAAATTGAGGAGCTTACTCCTTGTAGGTACAAGGCTCCTCTTGTTTTGCTTGTAGCTTTTGATGAGAGTGAGGCTTTTGTTTATCCGGGAGGGAAATATAATACTGGTGTTGAAGATGCTACGATTGTTGCAAGTCATATGATTTTGGCAGCTTCAAGCCTTGGTGTTGATTCTTGCTGGGTAAATCTTTTTGATCCTGATAAGGCAAGAGAAAAATTTTCTTTGCCTAAAAATGAAAAAATTGTTGCAATGATT # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:0, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGATTATTAACATTTGATGTATTGAAAT # Alternate repeat : GTTGATTATTAACATTAGATGTATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //