Array 1 2-1284 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLFZ01000196.1 Acinetobacter baumannii strain ABBL069 contig-3000037, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2 28 100.0 32 ............................ TAAAGGATAGTTAGCTGTAGGCCCTGCGGTTT 62 28 100.0 32 ............................ TTATAGTTATGTGTGTGATATCGTTAAGCTGC 122 28 100.0 32 ............................ TAGCACAATCCAAACCTCAATAAAAAGTAAGA 182 28 100.0 32 ............................ GAGCCAATAAGATCGCGAAGTATGCGGAAATC 242 28 100.0 32 ............................ ACAGAGAAAACCCCACATGTTCGAGGGACTGC 302 28 100.0 32 ............................ ATAATTCCGCCATCCTCGGCTGAGATATGGGT 362 28 100.0 32 ............................ TGCCGGAGCGGTCTTGTCATTGGCGAACCCGC 422 28 100.0 32 ............................ TATGCGATTTGATAATTAAATTGCGATACTGG 482 28 100.0 32 ............................ GAAATAAAAAACACCTGATGAAAACAGTTCAC 542 28 100.0 32 ............................ ATAATCACGAATATCACCAGTAAACCAGTGAT 602 28 100.0 32 ............................ TTATTGGTCCTGGTCAGTGGAATGGTGATTCT 662 28 100.0 32 ............................ TGGGTAAAAGCCGATGGATTAATCATCTTTTG 722 28 100.0 32 ............................ ATTAACAAGAGTGGAATTTATTGAACTATTAA 782 28 100.0 32 ............................ TCTGGGTTCTTTTCGCGTGTATGGGATACTTG 842 28 100.0 32 ............................ TGTAAAGTCATTCGTAATAACCGTTATACGGC 902 28 100.0 32 ............................ AAAACCAATCAAATAACGGTTATGTGGCCACA 962 28 100.0 32 ............................ CATAGCGACATATAGTTTTGCCCGGATCTGAT 1022 28 96.4 32 ..................A......... TGTTTCGCGTTGAGGTCCGGGTAATCGCCTAT 1082 28 78.6 27 ....C.....CTCC..........T... GTCTTGTATCCTGATTTCAAAGATTCA 1137 28 92.9 32 ....C....T.................. ATATCACGCGCCATTGCAAGTTTTCTACCGAT 1197 28 89.3 33 ...A........CC.............. TGATCTTTAAGATTAAGCATCCGTTCTGTTTTT 1258 27 85.7 0 ...TG.......C...........-... | ========== ====== ====== ====== ============================ ================================= ================== 22 28 97.4 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : AG # Right flank : AGAGTTTCTTTCAAAATTTAAGACGACGTATTTTGTCGTTAAAAGGTTGTATTAAGCTGATAAAAACTTTCTCTTTTTAAAACAAAAGATTATATTTTTATGATATTTAAACTTTAACAATAAACTATGCATGTCATTTTCATCTCGGCTTGTGAAAAAAGAGCTTTAAAGAAAACTCGAGCAATTTTGGATAGCTATGCTATTCGTACAGGACATTCGTCTTGGCAAGCACCAATGACAATGGACGGCTTAAAAGAAATTCGTAGTGCATTAAAAAAAGTAGCTACCCGACAAACTGCGGTGGCCGCTTACATTAATTTTGGTGTACGCAGAATGAAGCTTGCATGGGTTGTGGGAGCAAAACATAAATTTGCACACGATGGTGCATACCCAGTTGCATCGACTAAGAAACAGCAAAAGTTACTCATGCTTGATGAGTGGGTCAAAGTAAGTAGCTTGTTGGCAGGTGCAGCAGGAGACATGCATGATATTGGTAAGGC # Questionable array : NO Score: 6.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [1.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 23517-22768 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLFZ01000296.1 Acinetobacter baumannii strain ABBL069 contig-5000052, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 23516 29 100.0 31 ............................. TACTATTATAATGATCTAAACCCATTACAAC 23456 29 96.6 31 ............................T GCAGCTACTCGACATGTTGGTAGGGCAGATG 23396 29 96.6 31 ............................C AGTCGGCTGGTGCTAATTGAATAAAATCGTT 23336 29 100.0 31 ............................. GATTGAGGCGATTTTTATCGCGGACATTGCC 23276 29 96.6 31 ............................C AGTCCCCGCTTTGAAGCATTCCCATCAGTAC 23216 29 96.6 31 ............................T CACAGCTATCGTCTGGCTGCCGTCGCGTAGA 23156 29 93.1 31 A...........................T TATTATTAAACGGGAAAAGTATATTCTTGCT 23096 29 100.0 31 ............................. TACTATTATAATGATCTAAACCCATTACAAC 23036 29 100.0 31 ............................. TCATCAATAAGTTGGCCTTGATTTAAATAGT 22976 29 100.0 31 ............................. GATACAAACGAGTTCGCATCTCGACCAGAAG 22916 29 100.0 31 ............................. TTATCCAGATAAAACCATATCTACAAAGTGG 22856 29 96.6 31 ............................T CAACCTGAACACAGACATACATGTTCTATTG 22796 29 82.8 0 ...GC...................AT..T | ========== ====== ====== ====== ============================= =============================== ================== 13 29 96.8 31 GTTCTTCATCGCATAGATGATTTAGAAAA # Left flank : | # Right flank : TTGAATCTTAAAAAGAGAAAACCCCGAAACTTTCGTTTCAGGGCTTTTCACGAATCTTGGTGGAGATGGCGGGAGTTGAACCCGCGTCCGCCAGCACTACGCTCGAGAATACTACATGCTTAGATATCGTCTATTGTTTTAACACCAAGTGACCCGACGAACAGGGTACAAGGTGCGATCCTCTAAGTTTGGTATAAAGCCCCGAGGCTTGACTCTATACGGACTTGTGTGCGTGCGCTTCAGTCGGGTTCCCAGACCACAAGTATTCTAGGAAGCGGACAAGCGGCCCTTAGGCAGCTAGAGCGTAAGTTTCGTCGTTTGCGACTATTTAAATGCAAATTTTATTTACGAGAGAAAATGCGCTCTCGGCATGCATCTATGAGTTTCATCACCGGCGTCGAAGCCAATAACATCCCCATGAATGTCTGCACATCATAGCATAACTAAAATAAAATGCTGTGCATTTTATCAACAGTCTGCCACTGATGAACATACTTACA # Questionable array : NO Score: 5.87 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.77, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-1.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1651-3 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLFZ01000214.1 Acinetobacter baumannii strain ABBL069 contig-3000063, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1650 28 100.0 32 ............................ ATCATCGTAAGCATTGAATCGCGTGCCTTCAA 1590 28 100.0 32 ............................ AATGAGAAGAAAGTGGTTGCTATCGACTTCTT 1530 28 100.0 32 ............................ AATATGCTCGAATGAATTCCTTGTAGCATTCT 1470 28 100.0 32 ............................ AAGAACTGTGCGTCTTGGCGGTGGGAAAATCA 1410 28 100.0 32 ............................ ACTCCATAATTGCAGGTGTTGAAAGCTCACCG 1350 28 100.0 32 ............................ TTCTTGATCATCGTTATGTAAAAACCATTCCA 1290 28 100.0 32 ............................ AAGAAAAGTATGAACAGCAACTTATAGAAAAA 1230 28 100.0 32 ............................ GATGACCGTACCAACTGGATTTTGATATTCAT 1170 28 100.0 32 ............................ TTGTTGTGTATATAGGTTTTGCAGCTCATCTA 1110 28 100.0 32 ............................ TATAATCGAAAAACATCCAAAAGCGGGCAAAA 1050 28 100.0 32 ............................ AAAACGACCTTGTGACTCTGTGAATTCAATCT 990 28 100.0 32 ............................ AGTTGCAACTTTAACAACTGACGGTACTGCTG 930 28 100.0 32 ............................ ATAGTGGAAATACACGTAAGTTATTGATTTAT 870 28 100.0 32 ............................ TGTTGTTAGGGCTATTTCTGCTTTATCCGATA 810 28 100.0 32 ............................ AACTCATACAGCGGGTCCAAGAGCCTATGGTA 750 28 100.0 32 ............................ AAGACCAGTTTTGAAGGATATTAACTTTTTAT 690 28 100.0 32 ............................ TCGTGCTTGGGTATCACATATTGATGTGACTT 630 28 100.0 32 ............................ CACTAATCTCTTTGATTTAATTAAGTTTCAAC 570 28 100.0 32 ............................ ATCCGCATCATCAAAAATCGCAAGTGGGTTTG 510 28 100.0 32 ............................ AATAACGACGGTTGCGCTGTTGCACGTTCAGC 450 28 100.0 32 ............................ TTGATGAGAAACTGTTATTGTGTATGTCTCAC 390 28 100.0 32 ............................ ACGACAGGTAAATTGGTTGCCATGTGTATTGA 330 28 100.0 32 ............................ AATTGTAGAAAGCGTATCACTTATTTGCTTAT 270 28 100.0 32 ............................ ACGGATTACCTACAGGTTTACCAGTTGCATAA 210 28 100.0 32 ............................ TCTTGAAGGTGAGCCAACAAAAATCCATTTTT 150 28 100.0 32 ............................ GTTTAAATCCATAAATGAATTTTGCGGTTTTT 90 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 30 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 28 28 100.0 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : ATAGATTATATTGTTCTTCTATTTTGAAGGTTTTTAATTCATTAAAACTTTATATTATTGTTTTTAAGAGTTTTGTTTTTACTTAGCTCT # Right flank : AAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [3.3-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 5253-3 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLFZ01000320.1 Acinetobacter baumannii strain ABBL069 contig-6000025, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 5252 28 100.0 32 ............................ ATGCAGATAAAACAGTAAAACTCTATGAAAGC 5192 28 100.0 32 ............................ ACTGGTTAATTTTAATAATGCGGATGGATATT 5132 28 100.0 32 ............................ TCTTAATCTCTTCAATGTTCATCTTCAACCCT 5072 28 100.0 32 ............................ AAAACGTTGAACATTAGTAAGTGTTAGAACAC 5012 28 100.0 32 ............................ TTACGATGGCCAACAGAAATATTAGACATATA 4952 28 100.0 32 ............................ GATAAAGGTTGTATGCGCTCTAAAGCGTTAGT 4892 28 100.0 32 ............................ AATCCAAACAGCAAAACCGATGATACCTGCAA 4832 28 100.0 32 ............................ AGTGGGCTTATATCTCTTCTATAAAAAACGGA 4772 28 100.0 32 ............................ AATGCTGCTGTTGACGTGGCTGGTCCAGTTGC 4712 28 100.0 32 ............................ GGAGTCAGGCACACTATTAGATAGCAGTGTGC 4652 28 100.0 32 ............................ ATGATGAACCTGTCTTACCTTCAGATCCTTCT 4592 28 100.0 32 ............................ AAGCATTTCAGTTGCACCAAGATGAATACTTT 4532 28 100.0 32 ............................ TCAAGTGCAGATGCAGCCTAATTATTCTTCTT 4472 28 100.0 32 ............................ AAGAACGTTTGGCAGCAAAAGGAACATTACCA 4412 28 100.0 32 ............................ TTATTGTGAGCACCTTGATTGCTGTGCGCTGC 4352 28 100.0 32 ............................ TACAGCGGGAAACTTGAAAGTCATTGCGAAAT 4292 28 100.0 32 ............................ TGATTGCCCCCTGAGGAAACTGTATAAAGTCC 4232 28 100.0 32 ............................ AAACACCAACTAAGCCATTCCCTATTCAAAAA 4172 28 100.0 32 ............................ ATGAACTTTTAATGGATGCATGCGCCGCCCAC 4112 28 100.0 32 ............................ ACGAACAACGATAATTTGGAATACACGCTCAT 4052 28 100.0 32 ............................ TCAGGAGAAAGATCGTTCAAAAGCTCAAAACC 3992 28 100.0 32 ............................ TGAAAGTTTTGATATCCACTCTGCTGTTTCAA 3932 28 100.0 32 ............................ AGATGGTAAGAAAATTATTGAGTCTGGAGACA 3872 28 100.0 32 ............................ CGACAGTCCAGTTGATCAGATCTTGATTAGAC 3812 28 100.0 32 ............................ AATGACATGGTTCAACAATTAAATTCATCTCA 3752 28 100.0 32 ............................ GTTCTTTTCTGCAATATGTGCCATTAGGTATT 3692 28 100.0 32 ............................ ATTTTAGATGAAACAAAAGATAGCAGGATTAT 3632 28 100.0 32 ............................ AGACCAAGCGGATTGACCGTATTGATAAATAA 3572 28 100.0 32 ............................ TTCTGCAATACAAATCACTGGATCAGCCAGGT 3512 28 100.0 32 ............................ TGAGTCTTTGATTTCCCAAATATTACTTGAAA 3452 28 100.0 34 ............................ CCTGAAAAATTTCACTGTGTCCATTTCGTTATTA 3390 28 100.0 32 ............................ TATGTCTTTAAATTCTGAAAAAACACTTGTTC 3330 28 100.0 32 ............................ GAAAAAATTGAAAACTTTTTAGAAGTAAATGA 3270 28 100.0 32 ............................ GCCACACATGCCTAAAAACGCAAGTGCGCTCG 3210 28 100.0 32 ............................ ATTATCAGATAAGCCTTTTATGAATGATCGTT 3150 28 100.0 32 ............................ ATTAGCTATTAGCTTTTTGGCAACAACAACAG 3090 28 100.0 32 ............................ AGTTCATGAAAACAGCTTTAAAAAGAAAGCAC 3030 28 100.0 32 ............................ TCCGAAGGTAGTGAAGCTGTGTGTGAATTTAC 2970 28 100.0 32 ............................ TTGCAAGCTCGTCTAGCTAAAGTAGACCCTAA 2910 28 100.0 32 ............................ TGGTACGACAACTACGAAAAGCTGAGCAAAGT 2850 28 100.0 32 ............................ TCAACTTAAATGGATGCTCCCCGCGGTGAATT 2790 28 100.0 32 ............................ TTGATTGCTAGACGGATTTTTAGGCAGATCAT 2730 28 100.0 32 ............................ GAGTTTAATGCGCTATATGGCGACGAGGATTT 2670 28 100.0 32 ............................ CATGCAATCGCGTTGATTACCGCAGCTTCGAA 2610 28 100.0 32 ............................ ATGAGCCGCAACCATACGGTCTATGACTTCCA 2550 28 100.0 32 ............................ ATAGCGCCCTGCTCTATGTTGTCACTTCCGAA 2490 28 100.0 32 ............................ TCCAAGTGAATCGGCTCCTAATGCAAATGACC 2430 28 100.0 32 ............................ TGAAAACCAATATGCTGCCTAATTGCCATAAG 2370 28 96.4 32 ....A....................... GATCTGCGTCCATTTGTACTTGCTGCGGGTGC 2310 28 89.3 32 ....T.......AT.............. ATATACAGCACCGCTTAGTGCGACGCGGTCAT 2250 28 89.3 32 ....T.......AT.............. GCCCACAGGTTGAGCATCAACGGCCATCGAGA 2190 28 89.3 32 ....T.......AT.............. ATCATAGAGCTCACTTTGTCGTTGAGCCTGCA 2130 28 89.3 32 ....T.......AT.............. AGAAGGCCCGTAATTTAACTGTAAGCCGTGGT 2070 28 89.3 32 ....T.......AT.............. TCTTCCTGAGTTTTAATCCCATTTGCCTTACA 2010 28 85.7 32 ....T.T.....AT.............. CATCTTCGCCAATTGCTTTTGGAGAGTTGCTA 1950 28 89.3 32 ....T.......AT.............. TTCAGGGAATTATCGTGAAACTTTCATTGACT 1890 28 89.3 32 ....T.......AT.............. TGCACCAGCTGCTGGCTGGTTGAAATCTGCAA 1830 28 89.3 32 ....T.......AT.............. AGAAGGTGCAGAGTTTTGGGACTTTGGGTGGT 1770 28 89.3 32 ....T.......AT.............. TGTTTCAAAAGCTACACCATCAAAACCATTGC 1710 28 89.3 32 ....T.......AT.............. TATTTAAGTAATAAGTTTAATAACGACCTAGT 1650 28 89.3 32 ....T.......AT.............. AACACGTTCTCTATATCGCTGTTTGCGGTCAT 1590 28 89.3 32 ....T.......AT.............. TTCAGTTGGATATGCCTTTGATACCAAGAAAC 1530 28 89.3 32 ....T.......AT.............. GCCTGCAGACACGGATTTACGCAGCTGATCGA 1470 28 85.7 32 ....T.......AT...........C.. TAACCAAACTATGTCATCGATCGGAGATTTCA 1410 28 89.3 32 ....T.......AT.............. TTAAAATAAATGCCTGTGGTTTTTTCTTAACT 1350 28 89.3 32 ....T.......AT.............. AGTTTCCGAAGTTGAATTACACTCGCCAAGTT 1290 28 89.3 32 ....T.......AT.............. TAACACAGTGATTTGATTACCTTGAGCAACCC 1230 28 89.3 32 ....T.......AT.............. ATCTTGATGCCGAGGTCTTTAGCTTCTTGAGA 1170 28 89.3 32 ....T.......AT.............. TCATCCACCTTTGATGAAACGGATCCACGCAA 1110 28 89.3 32 ....T.......AT.............. TCTTGTGTGACGGCCTCCACTCCAGATCCCGC 1050 28 89.3 32 ....T.......AT.............. TTAAGCTTCAAAAATAGCCATTGATTATAAAA 990 28 89.3 32 ....T.......AT.............. TGACAACTTTCCACGGCAATCAGGGCTTTCCA 930 28 89.3 32 ....T.......AT.............. TAAAGATGCACGTGGCCTAATGCAAGTTATTC 870 28 89.3 32 ....T.......AT.............. TTTAAAATTAGGTGCTGAGTTACCACGGCTCA 810 28 89.3 32 ....T.......AT.............. TAAACCAAGAACTTGAAGATTTTGATGCTTAT 750 28 89.3 32 ....T.......AT.............. TAAAAATAGTGTGTTAATTATTTATGATGAAA 690 28 89.3 32 ....T.......AT.............. CGTATACATGCACATCAATACGATATCCCGAT 630 28 89.3 32 ....T.......AT.............. ATACTATTATAATGATCTAAACCCATTACAAC 570 28 89.3 32 ....T.......AT.............. TGCAGCTACTCGACATGTTGGTAGGGCAGATG 510 28 89.3 32 ....T.......AT.............. CAGTCGGCTGGTGCTAATTGAATAAAATCGTT 450 28 89.3 32 ....T.......AT.............. AGATTGAGGCGATTTTTATCGCGGACATTGCC 390 28 89.3 32 ....T.......AT.............. CAGTCCCCGCTTTGAAGCATTCCCATCAGTAC 330 28 89.3 32 ....T.......AT.............. TCACAGCTATCGTCTGGCTGCCGTCGCGTAGA 270 28 85.7 32 A...T.......AT.............. TTATTATTAAACGGGAAAAGTATATTCTTGCT 210 28 89.3 32 ....T.......AT.............. ATACTATTATAATGATCTAAACCCATTACAAC 150 28 89.3 32 ....T.......AT.............. TGCAGCTACTCGACATGTTGGTAGGGCAGATG 90 28 89.3 32 ....T.......AT.............. CAGTCGGCTGGTGCTAATTGAATAAAATCGTT 30 28 89.3 0 ....T.......AT.............. | ========== ====== ====== ====== ============================ ================================== ================== 88 28 95.1 32 GTTCGTCATCGCCCAGATGATTTAGAAA # Left flank : ACGTTGGGCCAAAACGCTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAGTTTATTCGTGATGAAGGCAAAAACTCTCATGACTCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGGATGGGAATTAGCTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCTGATCTAGTTAAAGATGCTTTTGTAATGCCACTCGCTTTTACATGTGCAGCAAGAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACTTTTAACCCAAGTACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : AAG # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.81, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCCCAGATGATTTAGAAA # Alternate repeat : GTTCTTCATCGCATAGATGATTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCGTCATCGCCCAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [1.7-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //