Array 1 74174-73411 **** Predicted by CRISPRDetect 2.4 *** >NZ_AVFK01000025.1 Skermanella aerolata KACC 11604 strain 5416T-32 contig31, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 74173 36 94.4 30 ........C..C........................ GGGGCCGTCCATAACGCGCAACTCTTGAGA 74107 36 100.0 30 .................................... GCCTTCACCGCCCGAACAAGGCCGAACCGC 74041 36 100.0 30 .................................... TTATGGGTGATGCAGTAGTCTTTGCGGTCA 73975 36 100.0 30 .................................... CGAACGTTACCCTGACCGCCTGTAACCTGT 73909 36 100.0 31 .................................... CCTCATCACCGTACATACCCTCAGTAGTGCA 73842 36 100.0 30 .................................... GCGGTTCAGCATGGTCTTGACGGTACCGTA 73776 36 100.0 30 .................................... CCATGCAAACCAACCTCACCATCCTAAGCG 73710 36 100.0 30 .................................... CACACCCAAGCGCGGCCGAGATCCTGACCG 73644 36 100.0 30 .................................... TGGTGCCGTTGGCGATGTAGTCGCCGAAGA 73578 36 100.0 30 .................................... GTCCGACCAGAGATACGCACAGGAGATCGA 73512 36 100.0 30 .................................... CTTTCGTTCGCGCGGCGTAGGTCGAGATCA 73446 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 12 36 99.5 30 GTTGCGGCTGGACCCCGATCCCCCAGCGGCTACAAT # Left flank : GCGAGATCGTCGACATGGGCGCCTGGACCGGCTCCGCCCGGAACCTGCGCGTCCCCATGGCCCCCGCCGGCTACGGCGTCGCCGTCCTGGTCCAGGAGTTCGACGCCGAGGGCCGCCCTGGGGCCATCCTGGGAGCGGCGCGGGTCGAACGCCGCCTGCTGGGCGCCGGCGTCACCCCCTGGGAAGCCCTGGTGAGGACGATGCGCGCGGCGGCCCGCCGGATGACCGGCGGCGACGGCGGTGCTGCGCCGCTGTAACCCCGAACGGGAGGGAACCGCCGCTTCTACGGCGCCGCCGCGAGCATCGCCTGGAAGACGGCGCGGACCCGGTCCGCCCCGATGCCGGAAACCGCAATTCCGGCTTCCACCATCTCATCGGTCGGATCGGGTGGCACCACCACCAGCCCGGCCCTCCTGATGACGTCGAGCACGCCGAGAGCTTCCGTCATTACCGGAGAGCAGGCAAGGCAGTCCCCGTCCGGGACGACGTTCGACGCCCCA # Right flank : AGATCCCCGCATAAGCCTTTGATCCCAAAAGGCTTATGCGGCCTTTTTTCTCCAGTTCCCAACGACAAACCACCGTCAAAACAGCTTGAACTGCTCATATTTGGTTCCGGGTTCTCGTTTTGTCCGTGCCTCCAGGCACACCATCGTCTGATATTGGCGGTCGGTGAAGGTCAAGATCTGCACCTTGCCCTTGGCCGGCACCTGCCCTCTGATTCGCTTGATCCGCGCGTCCACCTGCGGGGAGCCGGCGCAAAAGCGCATATAGACGCTGAACTGCGACATTTCGAAGCCCTCGTCCAGCAGGAAGTTGCGAAATCCTGTCGCAGCCTTCCGCTCGGCCTTGGTGGATACGGGCAGGTCAAACATCACCATCATCCACATCAGCCGATACGCGCTGAGAGCCATGCGCGTCCTCCTTGCCGGTCGGTGAGACAACAAGATCCAGCGGCAGCGGCAACAGCGGCAGGTCAAGCACCTTGCGTTCGCCAAGCAGCAGTTGC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCGGCTGGACCCCGATCCCCCAGCGGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTGCGGCTGGACCCCGATCCCCCAGCGGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.20,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.05,4.5 Confidence: MEDIUM] # Array family : II-C [Matched known repeat from this family], // Array 1 37025-35165 **** Predicted by CRISPRDetect 2.4 *** >NZ_AVFK01000041.1 Skermanella aerolata KACC 11604 strain 5416T-32 contig37, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 37024 29 96.6 32 ............T................ TACGACCGCGCCCGCGATCTGTTCGCCCAGGT 36963 29 96.6 32 ..T.......................... TGGGATCAGGAAATCACTTCTGAGAGCTATTT 36902 29 96.6 32 ............................T CTCCCGTTCTGGCAGGATCTGTCCGGCCGCTC 36841 29 100.0 32 ............................. GTCGCGACCCTCAACAAGGTCATCCTGCCGGT 36780 29 100.0 32 ............................. TACCTGCGGTACCATCTTGAACTGCTGGCCAA 36719 29 100.0 32 ............................. GGCTGGTACGACTGGGAAATCATGTGCCCGGA 36658 29 100.0 32 ............................. GCCTTCAGCTTGTCGTCATACTCGCGCCGGTA 36597 29 100.0 32 ............................. GCTTTCATGATTGACTGATTGGCGCCAATCGA 36536 29 96.6 32 .............A............... GCCTCGGTGTTGACGATCCCGGCCGCGCTCGC 36475 29 93.1 32 .........A...A............... TTCCCGCAGACGCCGCAGGGCTTCCTGGCGTT 36414 29 96.6 32 .............A............... GGCGGCAACACCATCAATCTGCCGTTCTGGCA 36353 29 96.6 32 ...................A......... AACGAGCCTACCTACAAAGTGTGGATGCACAC 36292 29 96.6 32 ....T........................ TGGTGAATGGTACACCAGTCGCCGTCGATGGC 36231 29 96.6 32 .............A............... GGTACGGAATTCACGTTCGCGGGACTGCGCCA 36170 29 100.0 32 ............................. TCCTTGGGTTTGTTGGGGTGTGCGGCCCCATG 36109 29 89.7 33 ....T..GT.................... GGTATCTCGAGGCCGACGCCGATATGACGCACG 36047 29 100.0 32 ............................. CCGACTGGTGAGGCGAGGGATTGATCTCGGTG 35986 29 96.6 32 .................A........... CGGAGCGACTTGTCGATTTCGCCGGCAAGCCG 35925 29 100.0 32 ............................. TACCGCGAACTCTACACGCTGATCGAGCCCAA 35864 29 96.6 32 ................T............ TGCACGTTCTCGGGCAACTATCAGGGCTTCTA 35803 29 89.7 32 .............A.......G......G TCCGCTGTCATGTCGTTGGCGAGCTGCTGCGC 35742 29 96.6 32 .........................C... TTCCTTCAGCCGCCCTATGTGACGGTGGAGCG 35681 29 100.0 32 ............................. CCGTACACCGATACGGTCATGCGCAACACGCT 35620 29 96.6 32 ...........T................. TCGGCCATGACAGCCTGTCCGGGACCGCCTGC 35559 29 96.6 32 ............T................ GCGGAAATCGAAGGTAACGACGTGGTTGCGGA 35498 29 93.1 32 ............T............T... ATCGCAAAGCTGATCGCCGGCGCTACCGGCAT 35437 29 93.1 32 ..............C..........T... TCCCCGTAGTACAGAAGGACAACCTCAGAGCT 35376 29 100.0 32 ............................. TTGAACCAACCGCCGACGTAGTGAAGGCTGTT 35315 29 100.0 32 ............................. CAGCGCGTCGAAATGTTTTCGCCTTTCGTGGG 35254 29 100.0 32 ............................. CTGCCCGGTTGGGACGAACCAGAGGCGGCGAC 35193 29 89.7 0 .........A..............A...G | ========== ====== ====== ====== ============================= ================================= ================== 31 29 96.9 32 GGCTCCCCCGCGCCTGCGGGGATAGACCC # Left flank : ACAACCGATCTTTCAATCTGGTTGTTATGTCAAGCGAACCCCCACCCTCGTCTCCCAGTAGTATAGCCATTGCCGGACCGACATGACCCGCCCGCGGTACGGATTGCCGCCCGTCCCGGTCGAGCGCCTTGTTCTGGAACCCGTGATTGGCCTTGCCGAAATCATGCAGCCCCGCCAGCGCCGCCAAGCGTCTGCGCTGGCCGACTGAAAGTTCCTGCTTCCCCGCTAGCCGAGCCAGCCGAAGCCAGATAGTCGGCAGGCCGAGCAGCGCTTCCGTCATGGCAGCGACATCGGCGCTGTGGTCGATCAAGGAAAGGTACGAAACGATCTCTCCATCCTCGTTCCGTCGCAGCTTTGCCCAGGGACGTGGAATGGGAAACATCTCTAGGTACCCTGTTCTTGGCTTACATTGTTCTGCTCGCCTTGCGCGAGGTTGAATGATACTAATGCACCATCAGAATCTTTGACAATCAAATAGGATCAGGTATTTACGCCTTAGA # Right flank : TTTGGTTCGACGGTGAGGGTTCAGGAACCCAGCCATTACCTTGTGGATGGATCAAAGGATGGGACAGAATCCACCCCAACAGAAAAAATTCTGTAATTTCAACGACTTAATCTAAAGAAATGGCGGATAGGGTGGGATTCGAACCCACGGTGAGGTTTCCCCCACGCAGCTTTAGCAAAGCTGTGCCTTCAGCCTCTCGGCCACCTATCCAGCGCGGCGTTTGTATAGCCACTGACGCCTGTCTCGGCAAGCCCTATTGCACGCTATTCATTTCCTTTTCTCGGGATAAGTCATGCACCCCTGGAAGCGACGGCGATTGCCTGGGCAAGGTCGCCGATCAGGTCCTCGATCGCTTCGATCCCGACCGACAAACGAAGCAGGTCGCCGGGGACCGGGCTGTCGGCTCCCTCGATGCTGGCGCGGTGCTCGATCAGGCTTTCCACCCCACCGAGCGAGGTCGCACGGGTGAAGACCTTTGTGTTCGCGGCGACGGCGATGGC # Questionable array : NO Score: 5.65 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.54, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCCCCCGCGCCTGCGGGGATAGACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //