Array 1 147894-149512 **** Predicted by CRISPRDetect 2.4 *** >NZ_FCLS01000002.1 Serratia marcescens strain 2880STDY5682995, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ======================================================== ================== 147894 28 100.0 32 ............................ TGGTGCAAATACAGCGAGTGTTGCGGTAGAGG 147954 28 100.0 32 ............................ GCCGGCATAAATCCACTGGCGCAGGCCGTCGC 148014 28 100.0 33 ............................ GCCAGGGCCTCGACCGCATCATGATCGGCTGGA 148075 28 100.0 32 ............................ GTCCGCATTGATTTTCCCGACGGCGCGGTCAT 148135 28 100.0 32 ............................ ATCACTAGCGCATCCAGATTGTGATAGTCGCC 148195 28 100.0 32 ............................ GAAAGCAAATACTGCTGAGTCGGGCCAGCCAG 148255 28 100.0 32 ............................ ACTTAGTGCTGGGTGGGTATGGTGCAAATGCT 148315 28 100.0 32 ............................ TGGTCACCGCCGGACAAGACGGCACGCCCCGT 148375 28 100.0 32 ............................ TATGACACCGACCGCAGCCGCGGCGTCAGCCA 148435 28 100.0 32 ............................ AACAAAACCTACCCGGCGAGAAAGCTGTACCC 148495 28 100.0 32 ............................ AGGCGCACGACAAGCGGGTTTAAAACGATGCG 148555 28 100.0 32 ............................ AGTGAAACCGATTGAAAAGTTTCACGCGAAAC 148615 28 100.0 32 ............................ GTTAGAATATTTGGTGTGAATAGATTGCATGG 148675 28 100.0 32 ............................ ACAAACTCAACCTTGCGCTGACGGGTGTTGCG 148735 28 100.0 32 ............................ AGCCACAACCCAAAATCGTTATCAAGCGCCAT 148795 28 100.0 33 ............................ CGCTGTAGTTCTGCCCATCAAATTTGACACCCT 148856 28 100.0 32 ............................ TTTTTCGCGGGATCATACAAATGCCAGTAAAT 148916 28 100.0 32 ............................ GGGAACGAAAGCACGCTGCAGGCCGCCGCCGA 148976 28 100.0 32 ............................ AAACTCATCGACAACGTTGGCAATTTCACGAA 149036 28 100.0 32 ............................ GGCACAAGAAGAGGTTTTTTGCCTTCTTTCCG 149096 28 100.0 33 ............................ ATGAGCGCTACAACAACCAGATAAGGATCTAAC 149157 28 100.0 32 ............................ AGCCTGATAATTTGTCCAAATCGCCACTAATC 149217 28 96.4 32 ...............A............ CCGGACAGGCCGGCGCAGATCCACAGTTCGTC 149277 28 100.0 32 ............................ GTTCGCGCAAACGGGAAATCGTGATGCAGCCT 149337 28 92.9 56 .........T...T.............. TAGCTGGCGGGTAGTGATTTCGCCGGTATCGGTGCACATGCGTTGGTAGTAGATGA 149421 28 92.9 33 ..T..A...................... CCGACTGCGGCTACGCCTTGTCGTGACCACTCC 149482 28 96.4 0 ....................A....... | A,A,G [149502,149505,149508] ========== ====== ====== ====== ============================ ======================================================== ================== 27 28 99.2 33 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ATCCGGCCTACTACGGCCGCTTCGGTTTTAAACCGGCCGCCGCCTATGGCCTGAACTGCCGCTGGCCGGACACGGAAAGCGCGTTCCAGGTGTATCCGCTGGCGGAAGACGCCCTGAACGGCGTCAGCGGCGAAGTGGCTTTTTCGGCGCCGTTTAATCGCTTTTAACGACCGGCAATAGATACTCCAACGTCAGCGGCGGGTGATTCACCAGCCGCTCTTTTTGTATTTTGCTCAGCTGTTTGAGTTGGCAATTCAGGTCATCTGTGGGGGCTATGCGTCTGAGTGGGACGGATGGTGATACCAAACAGGGAACCTATAATTCCTCCCTAAAGTGCAGAAATGTCACCTTACCCCGTTCCTTTTTGCCGAACCCTTTTTTGAGTGTCACTTTTAATTTATTGATTTAAAGTCATATTTTTAAACTCTTTAAAAAAGGCTTTTTGAACGGAGATTTCGATTTTCCTCCATCAATCAGCTGATTAGCGCTAATATGCAACG # Right flank : AAAGTAATATGTATTTGGTAGATTCCGGCAGTGATCAATAAGTGGATGACTTTATTTTTCTGATTGATGAATATTGACTCGCTTGCAACGGATTTCCCAGAAAAAACGTGGTAGAACGTTGGTGTCGCCTGCATTGATATGCATTGCTTGTTATTTATTTTAATTGTAATTATTTCATTATGGATAAGAAATATAACAATGAAAAATACCCTCTCCCCCTCTGAGTTAAAAACAATACTGCACTCGAAACGAGCCAATTTGTATTACCTGCAATATTGTCGCGTTCTAGTGAATGGCGGCCGTGTCGAATATGTCACGGATGAAGGAAAACAGTCTCTGTACTGGAATATCCCCATTGCCAACACCACCGCCATCATGTTGGGAACCGGAACCTCGGTCACGCAGGCTGCAATGCGTGAGTTTGCTCGCGCCGGCGTTTTAGTCGGATTCTGTGGTGGCGGTGGGACACCCCTATTTGCTGCTAACGAAGTGGAAGTCGC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:-0.02, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 157994-159881 **** Predicted by CRISPRDetect 2.4 *** >NZ_FCLS01000002.1 Serratia marcescens strain 2880STDY5682995, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 157994 28 100.0 32 ............................ TGCTGCATCACGAAACGCCGCTGGTGTATTGG 158054 28 100.0 32 ............................ CGCGACGGTCGGCATACCGAACTTGTCCAGGA 158114 28 100.0 32 ............................ TGTTCGGCGGCTCGGCCGGTTTTGCGGTTGGC 158174 28 100.0 32 ............................ TGGCGGGTGAATACGCGCCGCGACTGCGGGGA 158234 28 100.0 32 ............................ AATCAGGGGGCAATAATGGCGACGATTGACCT 158294 28 100.0 32 ............................ ATTACGGCCTGCGTGATAAAGTCAGCCGGAAC 158354 28 100.0 32 ............................ TTTTCATAGTGGTTTCACAGTCCCTTGAATAG 158414 28 100.0 32 ............................ GACCGGAAGTGGGTAAGGTTCGCCTGCGTCAA 158474 28 100.0 32 ............................ AATAATTCAGCAATATCGAGCAGGGGGATTTT 158534 28 100.0 32 ............................ GAAATGCGTGAAAACCGTGGTGAGATTTTCGG 158594 28 100.0 32 ............................ TTACTGGATTATTAATCACCCCGTGGGCGTCC 158654 28 100.0 32 ............................ AATCAATTTTTATCTGAATCAGGACAAACAAT 158714 28 100.0 32 ............................ GGATGAATCGCGGCGTGATATTTCCAGATGAC 158774 28 100.0 32 ............................ TATTCCGAATGCGTTAAAGAGTTGCCCAAATA 158834 28 100.0 32 ............................ TGCAGGACATTGAGAAGGTTCGCGCGGCGAGC 158894 28 100.0 32 ............................ TTCTCATTTTTACCCTGTGCCTGCTGACTGCC 158954 28 96.4 32 ...........C................ GGTAAATCATCCCACTCGCACGTTCGCATATC 159014 28 96.4 32 ...........C................ TCGCCAGTCTTACCGCTGTGCTTGTACCACAG 159074 28 96.4 32 ...........C................ TTATTGAAAAGCCCGCGTTTCGCCGGCGGCTC 159134 28 96.4 32 ...........C................ GTCACCGGCAGGAACGGACGCGGGCGGATCAC 159194 28 96.4 32 ...........C................ AGGACGACCTGAACACGTTTGTGCAGCAAGTC 159254 28 96.4 32 ...........C................ GAGGATTTGGCCGTGTTTGAGCAGACGGTCAA 159314 28 96.4 32 ...........C................ TGTACCGCCGGTGCCGCCAACAGAGGCGACGC 159374 28 96.4 32 ...........C................ TGCGGGCGCAAAACGGCAATCAGATGAACCTG 159434 28 96.4 32 ...........C................ GTTGACCGCCGGTACTTTCACTGCTGGCCTGC 159494 28 96.4 32 ...........C................ ACGGGACTCATGGCTTCAACCAAGGGGGCCAG 159554 28 96.4 32 ...........C................ AGTGGCAAGCAATGCGCGCTAAACTTTCTGCT 159614 28 96.4 32 ...........C................ TAAATGGTGCCAATTCGCAAGTTTGTTACCTT 159674 28 96.4 32 ...........C................ TTGAATAATACGTTTAAGGATTAAAAGATGAA 159734 28 96.4 33 .............C.............. AATTTACGCAGCGGGTTGCCGACTTTGATTTTC 159795 28 96.4 32 ..G......................... CCGCGCTTCGATAGCGGCAAGTGTGGCACCAG 159855 27 82.1 0 T............C......-..T...T | ========== ====== ====== ====== ============================ ================================= ================== 32 28 97.8 32 GTTCACTGCCGTATAGGCAGCTTAGAAA # Left flank : GCGCTGACGGCATTGGAGGGATTCGGCTGGATGAAAGGGTTACGGGACTATACCGACCTATCGCCCATCCAGGCCGTACCTGCTGAGACGGCGTTTCGTACGGTCAGCAGAGTTCAGGTAAAGAGCAGCGTTGAGCGTATACGCCGCAGGGCCGTCAGTAAAGGTTGGCTGACTGAAGAACAGGCACGGGAAAGAATACCGATGGCAAACGAGCAGCGAACCTCATTGCCTTTTATTGCCTTGAAGAGTCTCTCCACCGGGCAACACTTCTGCTTGTTCCTGAAACAGGGCCAATTACAGGAAAGGCCAACGCCGGGCGTTTTTAGTTTTTATGGGTTGAGTGCCGCTGCTACGGTACCCTGGTTTTAACCCTTTTTTTTCGTTCAGAGGTAACACATTGATTTTGTTGCCTCTGAACGGTATCTGAAAAATTAGGGTTAAACTGAGGGATTTGCCTATTGTTCTTTAATAATCAGTTTGTTAGTGATTTTTTTTGTTCA # Right flank : TAGGGGGGATAAAAATTTACCGACAGGTGTTAACCAGGAAGCAAATACGCCAACGACAGCGGCGGGTGATTCACCAGCCGCTCTTTTTGTATTTTGCTCAGCTGTTTGACGCGGTATTCCAGCTTCAGCGCCGTTGAGCGATCCCCCACCTGGCAGTGAAATGCCAGCGTCAGCTCCCCTTTTCCGCGCAGCGCCTTGGCGCCTTTGCCGGCTTGATGCTGCGCCAGGCGGCGCGCCACGTCGGTGGTGATGCCGGTATACAGCATGCCGCTCGGTAAACGCAGCATGTAGAGGTGCCAGGGAGTGGGGGAGGTGTCGGTCATCGTACGCCGCTTTGGTGGCCAGGGTCGGCGTATGATGGCATGTTCGCCATCACAATCCCATCCCCGGCCGCCGGTGCCCTACCGCTTTACCCCTTTTTTCCCGCCAGCTCGAAGCGCGGCGAGACGATGCCGTACAGCGTCCAGCCGAGGAAGGTGGCGATGGCGCCCCACATCATC # Questionable array : NO Score: 5.91 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.76, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //