Array 1 82864-90963 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOIV01000006.1 Rothia kristinae strain ATCC 27570 NODE_6_length_118706_cov_310.481, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 82864 36 100.0 37 .................................... TCCGCTGTCCGGGAGTGGCAGGCTAGGGGCGCCCTGC 82937 36 100.0 36 .................................... CAGTCCTCTAGGGCTTGTCCGGGATGTTTGGTGATC 83009 36 100.0 38 .................................... CGGAGGGACTACTGGATGAAGGTCAAGGATCCGGCGAT 83083 36 100.0 36 .................................... GGGCCGCGGGATGGGCCGAAGTGCACGAACGAGCAG 83155 36 100.0 37 .................................... AAGGACCTACCCGCCCCGGCCGGGCTGGAGTCCCTGA 83228 36 100.0 36 .................................... CCGGGACCGGGTGCCGGCCGGGTGAGGTGCTCGCCC 83300 36 100.0 36 .................................... GGGAAGATTCTCCGTACTCTCAAGCACGACATACGC 83372 36 100.0 37 .................................... CGGCATGACGGCAACCCGTCAAGCCGGTACCCAGGTT 83445 36 100.0 36 .................................... TGACTGGGAGCCCTTCGCGCCGGTGGCCCGTCGGTA 83517 36 100.0 34 .................................... GACTCCATGGCCTCCCGCGCCTCGACCTCCCTCG 83587 36 100.0 37 .................................... CCCTCATAGGGCTCTCCGGTCATGTGCGCACGGTTCT 83660 36 100.0 34 .................................... CGGTGGGGTGTCCGCCGGGGCGTCATCGCCAAGA 83730 36 100.0 36 .................................... CGGTCGAAGGCTCAGGTGCTCAAGGCTCGCACGAGG 83802 36 100.0 35 .................................... TGCGACGCCAACAACCTCGGAGACTGGGCTGGCGA 83873 36 100.0 36 .................................... ACCCCCGGCAACCCCGCCGCGAACACCCCCGCCAAC 83945 36 100.0 38 .................................... GGACGGCGCTACGGAAGAGCTCTAGCGAGTCATCAGTA 84019 36 100.0 34 .................................... CTGGAGCGGTGCCGGGAGACGTACCCCATCATGG 84089 36 100.0 36 .................................... GCGGCCAGGGCCAGCTCCACCTGGGACTTTCCAGAG 84161 36 100.0 35 .................................... CCCACGCGGAACACCACGCGCAGGGCCTTGGTGTC 84232 36 100.0 35 .................................... GCACTCGACGGCCCGGCGCTGAGCCACGGTCAGAC 84303 36 100.0 36 .................................... GAGTTAAAGGGAAGCGCTCAGAACCCTTGCAAACAC 84375 36 100.0 39 .................................... ATGAGCGGTGGGGGTTCTGATCTTGGTCCGATTCGAGAC 84450 36 100.0 39 .................................... TCCTTTGCCTTAGTGGGGTGCACACCCCAGCTTCACGGG 84525 36 100.0 35 .................................... CAAAGGAGAAGATCATGCCGCCCTAGCCGGACACA 84596 36 100.0 38 .................................... GTGAGACAAGTCCGGGCCCTCGATGACACCAGCGGTGA 84670 36 100.0 35 .................................... GGCGAGACCCGGGATGAGGACGGCGACTGGGTGCC 84741 36 100.0 35 .................................... TCACCCGTGTTCGTCGGAACTGAAACGGTCATCCA 84812 36 100.0 38 .................................... GCACCCATCATTCCCCTTGATTGCGGCTCTGCGCCTGT 84886 36 100.0 34 .................................... GTCTTTCCACCGGGCGCTAGCGTCTTTGCCGGTC 84956 36 100.0 35 .................................... TGGATCGACTAGGTGTTTCGTGCGCGGGACCCGGG 85027 36 100.0 36 .................................... CAGAACGTCGTGCTGCCGGTGTGGACGGCCATCCGC 85099 36 100.0 36 .................................... CAGTCCGTGAATCCGTCCCAGATCCTCCGCACACCC 85171 36 100.0 36 .................................... AGCGACTACCTCTACAAGGCCGCGGGAACAACCCAG 85243 36 100.0 39 .................................... AGTGACGTCATGTAGCCGTACGACGACACGGGAACTCGA 85318 36 100.0 38 .................................... CCGAATCGCGCCGCTTCGCGGCCGACCTGACTCACAGG 85392 36 100.0 36 .................................... GCCAAGAAGGCCTTGATCGTGGCCAGGACACCGTCC 85464 36 100.0 35 .................................... GCCCAGGCCCCCGTCGTCGTCGTGAGCCAGAGGGG 85535 36 97.2 35 ............C....................... TGGCCGTGCACAAGGGGAACCGCATCGAGCTGGAC 85606 36 100.0 34 .................................... TACCTCGAATCCAGCGCTCGCGGGATCACCCTGC 85676 36 100.0 38 .................................... AGTTGAGTCATCGCCAAGGCGGACAGGTCGAACAGACC 85750 36 100.0 37 .................................... GACTGAGTAACGCAATCCCCATCGTCCCTAACCGTGA 85823 36 100.0 37 .................................... ATCCCCGCGCCGGCCGGCACATGATGCGGGAGCTGAA 85896 36 100.0 36 .................................... CACCGCCGAAGAGGACGAGGCAGGGGAGTAGGCCAT 85968 36 100.0 36 .................................... ATGACCCGGGTGGGCGCCTACTACCAGGCCCAGAAG 86040 36 100.0 34 .................................... TGCACGACACCGGCCGGCTGGTACTTAGCCCCGT 86110 36 100.0 36 .................................... CCGAAGCTCCACTCCGGAACGTAGCCCTCCTCGAAC 86182 36 100.0 37 .................................... ACCCAGGTGAGGCGCCCCGCATCCGTGGTGTGCTTAA 86255 36 100.0 37 .................................... GGCAGCGGTCCAACTCATTCGCTCCAGTCTCCCGCGT 86328 36 100.0 40 .................................... CGCGTTTCCGCGTCCGGTGCCCGCATCTCCGGCTCCTAAC 86404 36 100.0 35 .................................... TGAGTTGTCTACTCGGTTGGCATTCCCCATGGCGG 86475 36 100.0 33 .................................... TAGGAGGGCCGGAGGATCGAACGTACCGGACCA 86544 36 100.0 36 .................................... ACCAAACGAACCCGCGCACTCCGGCACCACGTCCAA 86616 36 100.0 39 .................................... TACATCGTGATCCACTTCGGCACCGAGGCGGAGCTGGTG 86691 36 100.0 36 .................................... GCCATGCGCCCTCCTTGGGGTATGGGAAGGGCCCGC 86763 36 100.0 37 .................................... CGCCTGCAAGGTTCCCTGGCAAGCTAGTTGAGAGTGC 86836 36 100.0 36 .................................... CCGACCTGCGCGGCTGCTGGGTCGTCCGTGTAGACC 86908 36 100.0 36 .................................... GTGATGGAGGGCTCCGCGGAGGTCGTGCGCGTCCTG 86980 36 100.0 35 .................................... AGTCGCCGGACGAGCCAGGCGTAGATGTCTAGGCG 87051 36 100.0 36 .................................... CACGTCCACGAGAGTACACACACCCGTGACCAAAAG 87123 36 100.0 37 .................................... AGACCGATCCCCTGTGCCGCTGAGTAGATGCCACCCA 87196 36 100.0 36 .................................... GCGGACACCAGCTCCGGGGCCATCAGGTCCCGGGCG 87268 36 100.0 36 .................................... ACCACGCGGGACGGCGTGGAGGGCACGTCCCTGGAG 87340 36 100.0 36 .................................... CTCAAGACTAGCTAGGTCCAGGGCACGACGCAACCC 87412 36 100.0 36 .................................... CGCAGGTCACGGGTCCAGGAGTCCCAGTTGAAGTAC 87484 36 100.0 36 .................................... AACAAGCCGGAGGAAGACCTGGACCTGACCGTGAAG 87556 36 100.0 35 .................................... ACCGACTTGATGGGGTTCACGGGTGACCCCTCGAA 87627 36 100.0 35 .................................... GTGCGGCAGGTCCGGGCTCTGGATGACGTCAGCAG 87698 36 100.0 35 .................................... TGCGTCAATCAAGCGGCGTGAGGTCGCCGCTGACG 87769 36 100.0 37 .................................... CGGTCAGCGACCCACCCAACTCCTCGTTCGTCGGCCA 87842 36 100.0 37 .................................... CACTCCACGACGCCGCCGACTTCGAGGCCGCGCTGCG 87915 36 100.0 35 .................................... TTGGCGACGGCGACGGCGTCGTGCAGCTCCCGCTG 87986 36 100.0 34 .................................... TTCGCGCAGCACCCGGAGCACGTGCTGGGTGAGC 88056 36 100.0 35 .................................... GTCTACCCGCCTTAGCGCGCTTCAAGTCCATGCCG 88127 36 100.0 36 .................................... CGGTAACCGTGAACCCCATAGCGTTACGTCTACCCG 88199 36 100.0 37 .................................... GGGCCTGGGAAGCTCACCGTGTGGACCTTGGTTGTTA 88272 36 100.0 35 .................................... GCCCCGCGGGTCCGCTTCCACTCCGGGGAGGCCAG 88343 36 100.0 35 .................................... AGCGAAGCGCAATCAGCTGCGGGAAGCAATCGCAA 88414 36 100.0 34 .................................... CAGAACACGGGGGGTAGGGTGCGGGCGCTGGTCC 88484 36 100.0 37 .................................... GGAAAATCAACATTAGTGCGGCACATGAATCTGGCGT 88557 36 100.0 33 .................................... CATTCGCGCCGGTGGTGCCGCCAGTGGTGGAAA 88626 36 100.0 36 .................................... GCGAACGTCACCCCCGAGCCGAGCCCGTGGACCGGC 88698 36 100.0 36 .................................... GTAAGGAAAATCCGAGACCTCAGCGGTAAATACGAG 88770 36 100.0 35 .................................... CTGTTGCGACGCCGGACAGTTTGCCTAATCCCGCG 88841 36 100.0 38 .................................... ATGGCCGAGCTGAACCGCATCATCGGAAGGATCGACTC 88915 36 100.0 36 .................................... GACTTCTGAGGAGCATCATGAGCAACACCATCATCC 88987 36 100.0 37 .................................... GCGCGCGGTGCCCGGTCTGTCGCCGCCGTCGCCGTCG 89060 36 100.0 35 .................................... CGGCATGACGGGGAGCCGTCAAGCCGGTATGCAGG 89131 36 100.0 36 .................................... GCCTGGGCGAACGCCTGCTCGAACGTCCGCTCCGTC 89203 36 100.0 38 .................................... CCTTATAGACCTGAACGTCCCCACCCAACTGTACTTTC 89277 36 100.0 36 .................................... CGTGGAGGCGAACGGATCGTCGGAGTAGACCGTGCT 89349 36 100.0 36 .................................... GGCACCAACAAGCCCTCTTTCTGGCCGTCGGGGGAT 89421 36 100.0 36 .................................... CTCCCCCCGATCCGGGTCTACGACCGGCGAGTGCAG 89493 36 100.0 35 .................................... TGCTCGAGGGGGTCGAATTCTCCGCGGAGGGCCGC 89564 36 100.0 34 .................................... CCGTGACGGGGGAGCTCGCGTCCCGCATCAAAGA 89634 36 100.0 36 .................................... GACGAGGTGCTTCGGGCAGGCGATACGGAGGTGGTG 89706 36 100.0 33 .................................... GGTTCCAGGCCCACGGGATCACCTCGGCCTTGA 89775 36 100.0 36 .................................... TGGACAACGGGCCCGCCCTGCGCGCTGACATCGCCG 89847 36 100.0 36 .................................... GGTGGAGTACTCGTCGAGGGCCCCGTGCGCCCGGCA 89919 36 100.0 37 .................................... TGTGAATGGTCATACGTTCGTTGTCTCCCACGTCTTT 89992 36 100.0 37 .................................... TGTGAATGGTCATACGTTCGTTGTCTCCCACGTCTTT 90065 36 100.0 37 .................................... TGTGAATGGTCATACGTTCGTTGTCTCCCACGTCTTT 90138 36 100.0 37 .................................... CCTGCTGCGGGCGCACATCACCAACGAGCTGCCCCCG 90211 36 100.0 35 .................................... GTTTGTCGGCATGGGCCTGGCCATCTTTGGTGCGT 90282 36 100.0 36 .................................... CGAGAAGACGAAACCACCGGTCACACCCCCACGGGG 90354 36 100.0 37 .................................... GAGTCCCAGCGGGCGGAGTTCCTGGCGCAGAAGGAGG 90427 36 100.0 36 .................................... GGCGTTGAAGGGTGACGGGGGTCGTGATGCCGGTGC 90499 36 100.0 36 .................................... AAGTCCGCGGTGGATGACAGCAGTCGGAAGCTCCAG 90571 36 100.0 35 .................................... CGCCGTCGTGCCCCCGGGAGGCTCAGGTCTTTCGT 90642 36 100.0 35 .................................... TCCGTGTCGGGGTGCTTCGCGGCCGCGGCGTCGAA 90713 36 100.0 35 .................................... CTGAAGACTGGTCTGCGCGCTGACGGGATCGTGAT 90784 36 97.2 36 ............G....................... CTCTCGGATGGACGTGCCGACACTGGACGCATGGAT 90856 36 100.0 36 .................................... CGGGTTCAGGTAACCCGCGCCATTCCTGGGAATCGT 90928 36 94.4 0 .....................T.............A | ========== ====== ====== ====== ==================================== ======================================== ================== 113 36 99.9 36 CTCGCCTCCCCTTCGTGGGGAGGCCTTCGTTGAGGG # Left flank : CCGGGATGATGTCCGCCGGTATCTCGTCACCTATGACGTGGCTCAGGACCGGCGCCGAACCCGGCTGGCGAAGGAGTTGGAGCACTACGGGGACAGGATCCAGTACAGCGTATTCCTCTTCGACGTCTCACCGGCGGCGATGCTGCGACTGAAGACGGAGATCCTGGATCTGGTGGATACGGGGGAGGATTCCGTGCTGATCTGTGATCTGGGACTGAAGTCCGAGGTCTCCGACAAGAACTTCCAGTACCTGGGAGTGGAGCGTCCGATCACGGACGACTCCGTGATGATCTTCTGACGGCCCTGGTGCGTACTCGAGGAACCGCGAGCGCTCCGGCGGTAGCGGATCCTCGGCGAGCCGTCGCGCCACTGCTTTCCCCGGTATTCCGCGGCGGAGCGCCCCATCCCGGGGTGACACGGCCGGCTTCCGCTAGGCTGTGGAGCGAGCGCTCGCATGACCCTCGGTTTCCCATAGTCAGACCGCGTCAATTTCGGTCAGG # Right flank : AAATGTCGACGCCGAGGTGCAGGTAGCACACGCGACCCACGCTCCCCTTTAGGGGGAGGCCTTCGCCCGCTCCAACAGCCGGACGCACCTCAGGCATCGTCGACGTCCGCCACAGTAGAATCGAAGCCACAACGACGTGCGCCACCGAGCAAGGAGCGATCAGCGATGGTCCGCCTCAGCGACCTCATCTCCGTCCCAGCGATCCAGTTGGAGGTCGATGCCGAGGACTGGCGCAGCGCCATCCAGCACGCCGGAGCGCTCTTGGCCGACGTCGGCGTCGCCGGGCCGTCCTACACCCAGGCCATGGTCGACGTCGTCGAGGAGCACGGGCCGTACATCGTCATCACGCCTGGCTTCGCCCTGGCTCATGCCCGACCGGACGCCTCGGTGACCGCCACCGGCCTGTCCTTCGTCCGCCTGGCCGCACCCGTGCGCTTCGGTCACGCCTCCAACGACCCCGTCACCATCGTGATGGCGCTGGCCGCACAGGACCCTGGCGC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCGCCTCCCCTTCGTGGGGAGGCCTTCGTTGAGGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.20,-10.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //