Array 1 1232111-1232527 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011304.1 Microcystis aeruginosa NIES-2549 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 1232111 37 100.0 41 ..................................... AGTAAGAGTAGGGCTAATTCATGAATTAGCCCTACTTTTTT 1232189 37 100.0 37 ..................................... TTCACTGGCTCACCACCATGCCAAGGATTCTCAATAG 1232263 37 97.3 39 T.................................... TCCTTGCCATTATTAGCCCTGCTCGGGCCCAAGAACTCA 1232339 37 100.0 38 ..................................... CAGAGCCGTAAAATCGACGGGCAGAAAATGAATTCTAC 1232414 37 94.6 40 T...............G.................... TTAGTCTGATTTTTTAATCAGTGTAGAAAAGCCCCCCTCA 1232491 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================= ================== 6 37 98.6 39 AGTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG # Left flank : TCGGCGATTATACTTGGATTGGCGATGATGTGGTGATTTATAGTTTAGATAATGTTACCATCGGCAGTCATTGTGTGATTTCTCAAAAATGCTATCTTTGCACTGGCAGTCACGATCCCGGCGATCGCTCTTTTGGTTTAAAAACCACTCCCATCCTCATCGGTAATGGTACATGGATCGCGGCCGATTGTTTTTTGGCTCCGGGGGTAAAAATTGGCTCTAATGTTGTTATTGGGGCAAGAAGCAGCGTATTTGCCGATATTCCCGCTCAAAAGGTCGCTTGGGGTAGTCCCTGTCGTCCTCAATACGATAGAAAGATGAATTCTTATAGTAGTTAAGCTAAGAGGCATTTTTGGCGGTCTTCCGCTCGCTTTTGCCCCACTGTTTCCCACGGGACATATTAAGCTGTTCGTAATTTAATTAGCATTTTTATCGATTTTTGTCAAGATATATTTGACACAATTTATTAGAAAAAGGGTTTCTAAAGAAACCCTTTTTCT # Right flank : GAGTACCCCTTGGAAAGTCTCATCGAGAGGGGAAGACAGACCCCCAGACGCATCTCCAAAAAGGTGGTATTGGGGGGGGGTAAAAGTCCCGATACCAAAGGGTAGAACCCTGACTGGGAGAGCAATCGACACATCTAACCAGAGAATCGGGGTTTTAGGTCGGGGAGAGGCTGCATCGATTTTCAACCAAGAGTTAGGGGACAAGCTCACCGTCCGTAGAGATTGGGGGGTGGTTGAGGAGGAGAACCTCCCATCACCAACAATCTAGAGACAGCTTCTTCGGAAATCCTATAGAAGCGCTCATCATCCTCTTGAGGATTGACCCTTTCTACTACTTTAGCGTACAGTTTCCGCCTCTCGATGTGTAATTAATTTTGCTTAAGTAGGGATTGCTGAATAAATCTAAAAACCTTGTTGGGTAAGACTTTTAGACTTTTTGTCAATCAAAAAAGACCAGAGATGGGAGTGATCAGGGGGAAAATTTAGGGACTTTTTCCCTG # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.70,-4.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 2 3599862-3599679 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011304.1 Microcystis aeruginosa NIES-2549 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 3599861 37 86.5 38 AGAA.C............................... AGCGTACCGTGACACTTCCGGGGTTGACCCGGAGACGT 3599786 37 100.0 34 ..................................... CAGCCATAATTACCCCTCAACAATCCAATATTCA 3599715 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 3 37 95.5 36 GTTCCAATTAATCTTAAACCCTATTAGGGATTGAAAC # Left flank : GATGAAGCAAGAAAGGAGGTAAAAAGAGAGGCAGCTAAGATAAAAAACAAGAAAAATAAAGAAAATATCTTAGCAGGAATAGCCAAGAGCAAATATGCCTTATTAAAGAATGAAGGAGACTTAGTAGAGAAAGAAAGGAAAAAATTGGAAGAAATATATAAAGTGTCTCCAAAACTTGGGGAAATGCACAAATTAAAAGAGGAATTTAGAGAAGTATTTGAGAAAAATACGGAGGGGAATGAGGGATTATTTGCCTTGAGTGATTGGCTCAAAAAGGCGATGGCTTACTTTCCTAAAAGCTGCCAGACAATTCGGCGGTGGATTGACGAAATAACTGCCTATTTTGATAACCGAACAACCCAGGGAACAGTTGAAGGAATTAATAATAAACTGAAGGTGATTAAAAGGAGAGGCTATGGATTTAGAAACTTTAAAAACTTTAGTCTTAGATGTTTATTAAATTGGCATTTTGCTAGTTGATTTTACATGGTAAGTTCGGA # Right flank : AAAATAATTGAAAACAAAATCCGCAGCACTAAACCCTTGTTCCAATTATAGCAATTCTCTGACTCATGAGGTACAGTAGCAACAGTGAGTAAACCAATTGCGAATATCTTTTTGAGTAACTTATAACATAGCTAATTCAATCCCTTCTATTAAGTCTTTGTAAGTTCTCGCCTTCAGTTTTCTTAATATCGCTTTGACTTTTGACCAAAAGTTTTCAATAGGAGAGAATTCGGGAGAATAAGGAGGTAAATAGATGAGTCTAGCTTTTTCTTGTTCAATTATTTCTCTGACCATTTCTCCGAGATGAATCTTGGCGTTATCCATGAGCAAACAGTCTCCTTCTTTAATTTTTGGCAGCACTTCCTTCAGAATAAATCCTTCAAATGTTACCGCATCCACTGCACCGTATATGTTGACTGATGCCACAACTTTTTCTAAGCTTATAGCACTAATTATTGAAATATTTCTCCCTCTTTTTTGTGGTTTTCTTCCCCGATCTC # Questionable array : NO Score: 8.14 # Score Detail : 1:0, 2:3, 3:3, 4:0.78, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATTAATCTTAAACCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.50,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : NA // Array 3 3606945-3601305 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011304.1 Microcystis aeruginosa NIES-2549 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 3606944 37 100.0 34 ..................................... AAGGGACATTGCCTAACGCAATCACGTTAGTCAC 3606873 37 100.0 36 ..................................... GTGACTAATGATATTGTACCAGGATCAGACTATCAA 3606800 37 100.0 40 ..................................... GTTGAAGAAGATTGACCGCACCCGCCACATTATTCTGAGA 3606723 37 100.0 34 ..................................... AATAAAACCGCCAGCAAACAATGTTTGATGGGCA 3606652 37 100.0 35 ..................................... AATAGTCCGATTTAGACGATCAGCCATGCGATCGC 3606580 37 100.0 33 ..................................... CGGCTTGAATGCCCACATATTAAAGCCATTGCT 3606510 37 100.0 34 ..................................... ATTAGATGATATTAATTCTATCGTTATCAGTGGA 3606439 37 100.0 41 ..................................... TCCGTAAGGTTTCATGAGAGAGAGGTAATCGGTCGTTCCAA 3606361 37 100.0 35 ..................................... AGTGACACTTTTAAACAGTCAGTAGAGGACGGAAC 3606289 37 100.0 35 ..................................... TTGATTAAGATGCCCGATTCCCCTTCATAAAGAGA 3606217 37 100.0 33 ..................................... TTTAGGGTATCTGGGTTATGCAGTAGGTAGCGT 3606147 37 100.0 34 ..................................... TTTTTGAAACTTGCTTCTAGCAAGACTTTCAGAC 3606076 37 100.0 37 ..................................... AGATAACAATTATTATCCTTATTTTCAATATCAAAAC 3606002 37 100.0 34 ..................................... CGATTTTAAGTATGAACAAATCGAGTCAATGCTT 3605931 37 100.0 36 ..................................... CAAATCTTCTTTTATTTCTCTCAAATTCTTTTTCGA 3605858 37 100.0 34 ..................................... CATCTATTGAGTCAGTCTCTACAGTTTCCTGATT 3605787 37 100.0 35 ..................................... AAGGGACTGTTCTTAATCACATAGCGACGGGAATA 3605715 37 100.0 34 ..................................... AGTAGAAGATGGAACCGATGGGAATTTTATGTTA 3605644 37 100.0 33 ..................................... AGGGGAAGGAAAAAGCATCATCGGCCGCGCCAT 3605574 37 100.0 35 ..................................... TCGCTGGGGGGATAACCTTATCCCCCTTTAATGCT 3605502 37 100.0 34 ..................................... TCGATCGCCGGTCGGGCCGGAGGGGGAAGGGGGG 3605431 37 100.0 35 ..................................... GGAAAACATCAAAAAACTAAAGGAAACCAGCGAGG 3605359 37 100.0 35 ..................................... ATTCTACTATGATAGCACAAAAAAAATCTAATAAA 3605287 37 100.0 34 ..................................... TCATTGCTTAATAAATAGTTTGACGTGCCATGAA 3605216 37 100.0 34 ..................................... ACAGTTGCATTAAGGTCTGGCAAGCAAAAAACAG 3605145 37 100.0 37 ..................................... ACAAAATTCAAAAAGAAATAGAGAAGATAGTATTAAT 3605071 37 100.0 34 ..................................... CACTACTTAGAATAAAACTCTTGACACTATACAA 3605000 37 100.0 34 ..................................... TTAGTGGCAACAGATAAAACAGTTTTTCTGATAG 3604929 37 100.0 34 ..................................... CAAATCTTCTCTTATTTCTCTCAAATTCTTTTTC 3604858 37 100.0 35 ..................................... AGAAATATCAAAATATGGACTACAAAAAACACCAT 3604786 37 100.0 33 ..................................... TTTCTGATAGATAAAAGCGATGTAAACTATCCA 3604716 37 100.0 34 ..................................... CCCCTGCTAATAGTTGTTTTAGGTCGGTTGAACC 3604645 37 100.0 36 ..................................... CCGCCTTTGATTTCAAATCCCGATGATTCCAGGGTA 3604572 37 100.0 36 ..................................... TACCGATTTATCAAGGATACGGGTATCGCACCCAAT 3604499 37 100.0 34 ..................................... GCCAATTCCTTGAATTATGCCGGTCTGGTAAAGG 3604428 37 100.0 36 ..................................... AGGCATTTTTTCTTGCTTCTAAATAATGGTTTTTTA 3604355 37 100.0 36 ..................................... TCGATCAGGATACGAAACCCAAAACCGTTAAAAACG 3604282 37 100.0 34 ..................................... ACTAATAAAAGTTACATAATCTTTTATTTGTACT 3604211 37 100.0 36 ..................................... GACAATTCTGTAAATGATATAATCGCCGGTGTACTG 3604138 37 100.0 35 ..................................... TAAAGAGGATTCTAGTAAAGTTCTAATTGCTACCG 3604066 37 100.0 34 ..................................... ACGATACCATTTAAAGGAGTCGCTAAATTAGCAG 3603995 37 100.0 34 ..................................... CGGGGCAAAAGACTTGACCGGCAACGGGAACAAT 3603924 37 100.0 36 ..................................... AGATAGAGACGGGTTTATTTTTCAGCATCTCACCTA 3603851 37 100.0 34 ..................................... TTTCTTGATTGCTTTCTTGAGTTTCTTGATTGAT 3603780 37 100.0 34 ..................................... TTTTACATCTTAATCCCAATTCTTTTGATCCTGA 3603709 37 100.0 35 ..................................... TCATAAAAAACCACCGCTTCCTCATCAGAGGAAAC 3603637 37 100.0 34 ..................................... ACTTCCTATTTCTCCCAATCTCGAAAAAATTCTT 3603566 37 100.0 35 ..................................... ACCAGCTTGAGAAGAAATATGGAAAGAGTAGGTTA 3603494 37 100.0 38 ..................................... AAAATCCCACGAGTTACCTTCGGGTTCACCCCTTTTTC 3603419 37 100.0 33 ..................................... CTTAACGAGACAGGGCTTGAATTATTAGACCTG 3603349 37 100.0 35 ..................................... AAGGCTAAAAACAGAAAAGAAGCATCATCATTCTT 3603277 37 100.0 35 ..................................... ATCGAGTGCCAATTCTCAAAGTGTCACAGTTAGAT 3603205 37 100.0 34 ..................................... AGCGATTGGATATCGATCGAGTCTTCTAAATTAT 3603134 37 100.0 33 ..................................... ACGGATTTATTTTATATTACCAGCGACCCTCGA 3603064 37 100.0 35 ..................................... TTGTATAAAGTATGTATAAGTATCTTGTATAAAGT 3602992 37 100.0 34 ..................................... ATCGAGTACAGATAGGGTAAAATCCTGGCCTTTT 3602921 37 100.0 34 ..................................... CGAAAATCAACACATATATGTGTTGATGGACTTT 3602850 37 100.0 35 ..................................... CACGGGCTAAAGTAGTATTCGCGGAACGTCTATAA 3602778 37 100.0 34 ..................................... ATAATCACAAATAGGTATAATTGCAGTATCAAAC 3602707 37 100.0 39 ..................................... CCATCGACTTCATCACCAAACATAATGGTATTTTCCCAA 3602631 37 100.0 35 ..................................... TCCTTAACGGGCGCGTAGTAGGGATGACCCTCACT 3602559 37 100.0 34 ..................................... AAGTTTTCTGGCAGTCGTACCGACTCGGATCCGA 3602488 37 100.0 36 ..................................... GCCCAACTTCGAGGAAAAGATCGACGCGGCGATCGA 3602415 37 100.0 34 ..................................... ATAGATAGCTTGAGTAGATAACCGTCCGTCCCGG 3602344 37 100.0 36 ..................................... CTAGACACTCCCGGCCCCAATCGAAAGAAAAAGAAA 3602271 37 100.0 35 ..................................... AACGATATTATCGAGTGGATACCAAATAAAACAAG 3602199 37 100.0 34 ..................................... ATCGCGCCATTCTAGCCTTAACACTTTGCTGATT 3602128 37 100.0 34 ..................................... AGTTTCAGGCGCGACAGACCTGACTGGCAACGGG 3602057 37 100.0 33 ..................................... ATCTATGGGGATGAAATCGACGGCACGATACAG 3601987 37 100.0 34 ..................................... AGGTAATCGTAAATCGATCCGAGTGCTGCGGGGT 3601916 37 100.0 35 ..................................... CGATCCTAGAAATTACCCTAAAATCTCTAGAAATA 3601844 37 100.0 35 ..................................... AAACAACGAGATTAGGGCATCCTTGAGTGTTCCGA 3601772 37 100.0 34 ..................................... TAATTCGCCTGATACCGTCCCTAGTCAGTTACCT 3601701 37 100.0 35 ..................................... CAATTCAGCAGTATTTTTAAGCATTAATTCCACTT 3601629 37 100.0 34 ..................................... TCCTACAGAATTGGGCTAAAAATAGCCGAAAAAC 3601558 37 100.0 36 ..................................... CCCCTGCTAATAGTTGTTTTAGGTCGGTTGAACCGT 3601485 37 100.0 35 ..................................... GGGATATGTGCTATGTATCGACTCTTTACACCCTA 3601413 37 100.0 35 ..................................... AATTTTGGGGATTTAAGCCAAAATACCCTGAATTT 3601341 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================= ================== 79 37 100.0 35 GTTCCAATTAATCTTAAACCCTATTAGGGATTGAAAC # Left flank : CAAACAAAAGAACCTTGGTATATTCTGACAAATTTTGTGGATTTAGAGACGGCAATAATTGCCTATCAAAAAAGATTTGATATTGAGGAGATGTTCCGAGATTTTAAGTCGGGAGGCTATAGCTTAGAAGGTTCTCAATTAGCACCCCAATACTTATCAAAGCTGATAATTGTTATAGCTATCGCCTATACAAGTGCCACACTACAAGGTAAAAAAATTAAGGATATGGGAATCCAAAAATATGTCACAAGACCTGAAAAAAGATATAAAGGTCAACGCAGACACAGCAGTTTTTATGTGGGTCAACATCTCTATCATTGGCTCCAGCTACATCAAATGTTCCAAAAAAATATAGAAGAGCTAATGCAAATTAGCCGCTATCGGTTGAAAGATTACATCAAGGGACAAAGAGCTATATCGCTTGCTCTATCTACCTTCTAGCTGGCTTGTCCCCCTCCCAGAACATGGATCGAGCGAAAAAAGGTTGTACCAGCTTTACA # Right flank : CTGTAATCGAGACGGGAGTATCAATAGATGTTGGCTCTTCCGAACTTGTCATGTAAAATTAAAAAAAAACAGACAATTATTGCTGACCAATAAAACAATAATTTATCTTTAAAAGCTGACTATGCTTGCAATACAGCAATTTATTGTTTAAAATATAGACAGCCAAGACCAGCAATTTTAGACACAAGCTATACTTATGCCATCAAATCCACAATTAAAGTTAATGACCGAGCTACTTCACCTAGAAGGAGTTGTCGTTACCAATTATCAAATTATTACCGATATAGGAATTGTTTTACATTTAGAAAATATGTCAAGAGAAAGCCAGTGCATTCATTGTGGAAGTAAAACGGAAAAAGTTCATCAAAACAATGAATTAACAATCCGAGATTTACCCTTTGGAGAACAGGCATTATATCTGAGAATCAATCGTCGTCAGATGAGATGCGAGAAATGTGGGAAAAAATTCACAGAAGAACTAAATTATTTGCCGAAGAAAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATTAATCTTAAACCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.50,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [60.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : NA // Array 4 3608954-3608265 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011304.1 Microcystis aeruginosa NIES-2549 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 3608953 37 100.0 42 ..................................... AGTCATTTTTTGGTACTCCTAAATGGGTTAATTACTGATAAC 3608874 37 100.0 34 ..................................... ATCGACTGTGTAAGACGTGACAATGGCGAAAAAG 3608803 37 100.0 34 ..................................... CTTATTTTGCCAACTTCCAGAGATATTGACATTA 3608732 37 100.0 38 ..................................... TCCACACTGCAGCAACACCGACCACCACAATCGCACTT 3608657 37 100.0 35 ..................................... CTATTCTCGTAATAGAATAGACAATATTTTGTTCT 3608585 37 100.0 33 ..................................... GAATCCTGATCATGGGTAATGCTCACATACCAC 3608515 37 100.0 36 ..................................... CGGCGTACCAAATCTGGACACTCTTGCAACACCAAA 3608442 37 100.0 33 ..................................... ATTTTCCTTGTCTGGAGTACCAATCAAGCGAAA 3608372 37 100.0 34 ..................................... TTGTTTAATTGCTTTTGTGCGTCAGTGGGCAAGG 3608301 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================== ================== 10 37 100.0 36 GTTCCAATTAATCTTAAACCCTATTAGGGATTGAAAC # Left flank : TCGAAAGTGAACCAACATTGACGCTTCAAACCGGGGTTCATTGCTGTAGGATGAAAACCCCAAGAAGTATTGTAAATAAGGATTTTCTTTGATTTGTTCTACCGTTTCTCTATCGCTTGTTCCTAATTTTTCTTTAATAATTAATGCTCCGAGTGCTGTCCTGAATGTTTTGGCGGGTGTGCCCATTTCTTCTGAAAAAAGTGATGCGTATTCCGCTTCAAATTCTGACCAGGGAATGAGGTTGGCCATAATTACCCAACGATTGTCTTGGGATAATTTCCCCTCAAAGGGCAGCTCGAAGTTTTCTGGTGGGGTTGAGGGTAACTCGCTTTTACGGTACATTAGCACTAATTAGAGAAGATGCAAGGGTGATGCAAGGGTTTTAAGAGATTCTAGCAGATTTAAGTGCATTTGGGAAGCTCTCAATCAAGCTAAAAGCCCTTTCCTGTAAGGTTTTTACCATTATTCAGCAAACCCTAATTAGCTAAGGGACAATAGAT # Right flank : ATGGATCTGACAGGGGGACAAGCAAGCTGAAAAGCTTATGTAGCATAAAATACAGACACAGACTCCAAAAAAAGATAAGTCATATTTACCATATATGACCTAAATAACGAAAATGATAAGTGAACTATACCAGAAAGTGTTAGAAAATGAACTGGGACGAGCCAGATATCTACTGTTGTTAATGATAGTTGGAACCTTGCAAATACTAAAGCAAGCTAAGTTAGAGATATTAGCTGAAGCCTTACCAATACCAATCCTGTTTGAGAGTCGGAGAAAAAAACTAAAAAGATTTTTAAAGCTGGAAATTCTGAATATTGAAAAAATCTGGTTTCTCTGCCTAAAAGAGATGTTAAAACAGCAGCAGAGATTCACAACAAAAGGATTAGCGTATATTGCCATAGACCGGACAAGTTGGGGAGCAATAAATATCTTGATGGTGAGTCTAATTTATGACAAGAGAGCCATCCCAATCTATTGGGAGATATTAGATAAAAAAGGAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATTAATCTTAAACCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.50,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : NA // Array 5 3612582-3610677 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011304.1 Microcystis aeruginosa NIES-2549 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 3612581 37 100.0 34 ..................................... TTTTTTGGAGTAGGATATTAGTAAAAGTGATCTC 3612510 37 100.0 34 ..................................... AACCTTCGCGCCGATCCAGAAAAAACCGTAATTT 3612439 37 100.0 35 ..................................... TAGGCATTGATTAATAAAATCGTATAAAAGTGAGG 3612367 37 100.0 35 ..................................... ACAATTTTAGGGCGCGGCCTAATTGCCAGAAGACT 3612295 37 100.0 35 ..................................... TCTCATCGCCGGTTCCCGGACGGCAGCCGTCAACG 3612223 37 100.0 34 ..................................... GCTAATGGACTGCTTTCTCAGTGGGGAAATTTCC 3612152 37 100.0 36 ..................................... AATGACTAACCCCGACAAGGGTGACTCGCTATTAAG 3612079 37 100.0 35 ..................................... AGACAAGTACGCTGCCAAGCTTAAAGCAAGGAAGG 3612007 37 100.0 36 ..................................... CTAAACAGTATTCTAGACACCCTAAAAAACCATCTA 3611934 37 100.0 35 ..................................... GAGTTTACCAGTTAGCAGGGTTGAGCCTTGACGGC 3611862 37 100.0 35 ..................................... AATCCCTCAAGGGATTGCAGTAAATCATCTAATGC 3611790 37 100.0 35 ..................................... ATTTACATCCCGGTCTGCCATGACGGCCTTAAGTC 3611718 37 100.0 36 ..................................... TTGGCTTTTTGCCAAGTCCCCAAAAGCTTGTCTTTT 3611645 37 100.0 36 ..................................... ATTCCCTCACCCGTTACGGTTCCGATCGCGTCCGTT 3611572 37 100.0 35 ..................................... AAAACCTAGATTATTTAGTATCCTCAGACAAGAAG 3611500 37 100.0 36 ..................................... TTGTAACTGCTCTAATAGCTTATCGGAATCAAATAA 3611427 37 100.0 34 ..................................... TCAGGCTTGTGAGCCGGGTACTGAAAGAAAGCTT 3611356 37 100.0 34 ..................................... AAATCCGCAAAAGTTGCGAATTTGCCTTTCGGCA 3611285 37 100.0 34 ..................................... AGGTTTGAGTCTGATAAAATTAATCTTCGGTTTC 3611214 37 100.0 35 ..................................... CTATTAAATCCTGAGTTATTGAGATCAAAAGCGCA 3611142 37 100.0 33 ..................................... CATCACCAGCTTGATTAGCCAATTCCACTAAAT 3611072 37 100.0 35 ..................................... AAGAAAGAAGATGATCGCTCGATCAGATCGATCTT 3611000 37 100.0 35 ..................................... AATACCGTTGAGATTGCTGATAAGGTTGAGTCTGT 3610928 37 100.0 36 ..................................... CAGTTTTCTCTATACTATCCCCACAGACTAACCCAT 3610855 37 100.0 34 ..................................... ATTTCTACATCTCCCCCCAAAGACTTTAGCGAGT 3610784 37 100.0 34 ..................................... GATTACGCCATAAGCAGCCCTCCTAGACGCTCTA 3610713 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ==================================== ================== 27 37 100.0 35 GTTCCAATTAATCTTAAACCCTATTAGGGATTGAAAC # Left flank : TTTGTTATCAGTTACGACATTTCCGATGATAAGCGACGAACCAAAATTCACAATACGTTAAAGTCCTACGGCCAACGGGTGCAGTATAGTGTTTTTGAGTGCGATCTAACCGATACCCAGTACGCTAAGCTGCGCGGGCGCTTGAGTAAGTTGATCAAACCCGATACCGATAGCATCCGCTTTTATTTTCTCTGTGCCTGTTGTCGGGGTAAAGTTGAACGCATCGGTGGTGAGTTACCCCGGGATAATACAATTTTTTTTGTTTAGCTCGGTTGCGCTTCTGGGTAGCTGTAAAAATTCTTAACTATTATGTGGTGGCTGAAAAGCTTATGGAATATAGATTCGAGATGATTTTCCTTTCCAACGCGGGGCGCACCTTATCCCGTAAGGTTTTGCGGGGTCTTGAAGAACTGGGTCACTTGCTGTATGATTGGTTTATTGCAGGTGCGGCGCATACGAACCTTGAAAATCCCATAGCGTATGGCTTTTACCACTGGGCG # Right flank : TTCTATTGCTGGTAATTAGGGTTTGCTGAAAAAGTCATTGAAAAGTACAGGTCTCTTAATCAATGATTTCACTTAGCTACAAGCATAAGCTTTAGTTGTTGATTAATTTTTAAGTTATAACTTATCCTAATCATTGACCGAGAAAAAGTGCTGTTTTTCCATTTCAGACATAAAAAAGCCCAAAAAACCTGCCTCAACAGGTTAGAAAGATTCATGACTAAAAAAGTAATAGCAATCGCTGAAAAGGAAGTATGAGGAAGTTTAGCCATCACTTTACCTAAGCTAAATCTTCTTTTCCCCTGTCCAAATTTGCCCTCTATACAATTCCGAATCCTCTCATCATCGGTAGCTTGTTTCTTTTGTTCTTTACTAACATTTTTGGCTGGTCTTCCTAATGGGGGACCACTGATTCTGATTCCCCTTTCTTTACACCAAGCTCGGTTTTCTCTGGTTCGATAAATTTTGTCCACATGAACTGATTCTGGATAGTATCCTGTATA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATTAATCTTAAACCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.50,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [66.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : NA //