Array 1 2617-1979 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JOIY01000078.1 Streptomyces sp. NRRL S-340 contig78.1, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence               	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	==============================	===============================	==================
      2616	    30	  80.0	    31	CG..........T.T..A...........C	GAGATCGTCTGTCCTGGGGTGTACCCAATCT	
      2555	    30	  96.7	    31	.............................G	GGGCGAGGTTTCGTCATGGCACGGGACGGTA	
      2494	    30	  93.3	    31	............................GG	CGATCTGGATGAGTTCGAGTCCGGGACGGGT	
      2433	    30	  96.7	    31	.............................C	TCAACACGGACATCCTGGGTGGCCTGCTGGC	
      2372	    30	 100.0	    31	..............................	TACCGTTCGCGCGGGGTTCCGGCCCGCCTGT	
      2311	    30	 100.0	    31	..............................	GACGGCATCGAGCGCGTCAGTTGGGAGGAAT	
      2250	    30	 100.0	    31	..............................	GGACCGCGCCGTTGGTGTCGGCGGTGACCTG	
      2189	    30	  96.7	    31	.............................A	AGGCGGACGTGTATGCCGCGACCCTGGCGAG	
      2128	    30	  96.7	    31	.............................G	TGCTTGAGGCCTCGTTTGGTTACGGCGGCCG	
      2067	    30	  93.3	    29	...........T.................A	GCATCGCGAGCCCGCGGCACGCAGGGTGT  	
      2008	    30	  90.0	     0	........T..A..............T...	|                              	
==========	======	======	======	==============================	===============================	==================
        11	    30	  94.9	    31	GTGGTCCCCGCGCACGCGGGGGTGGTCCCT	                               	       

# Left flank :   TCGCACGGTCCCAACTCAGCAGCGACAGCGCACCAGAGAAGACCGCCAAGACCAACACCGTCGTCACCAGCACCGCGCGCCGGCTACCCCGCAAAGCCACATCCTCTCCCCCCGTTGAGGCGGAACCGTACCGGACCCGGTACGGCCCACGTCGCATGCCGAGCCCCACCATACGGCCAAGCCCACGTCCCCCATGCGGGAAAGCTCCGGAGGTTAGCACTGGAGGGCAATAAGCGCCCCGGACAACGTGACCGCACGGCCCACCACAAAGGCAGCGTCGGCCAGCGCTGGGACCCCCTGGACTGTGCTCTCGCCCAGCCTGAGCTTCTAACTCGACGCACCAGGGCTCTCCTTACACGCGGGCTTCACGAGTCGCACCGCGCAGTGTTGTCGTCTCCGATGTCACCATCTCAAGGGTTCCGAGCGGACGGCTGCGGCAGCCGGACCATGGCGGGTACGGTGGCCGCTGTACACGCTGACCCACGACAAAGCCGACGTGG
# Right flank :  GGGCGAGGTCCTGGCCAGCTCGAATCACGTGGTGGTCCCCCGCGCACCAGCTCACACCGCGCCGCCCAAGCGGCATAGAGCCGAAAGAGTGGCTGCGGACCCTGGGAGCACCTTGGGACTTCTCTGGGACTTCCGGCTGCATCAACGAGCACGAGCAGGAAACAGTGGAAAGACCATTCGTGCAGTTCATTGGCCCGTGATCGGCCATCACTGTAGATCCCACCGCTGGCTGGTCTCTTCCGGGACATCGACCATGGAGGACCCACTGCTCCGCGCAGAGCGTCGCCCCGTGAGCGGTCCCACTGACATGCACCATCCTGAACAGGCCCTGACCTGCCCAACAGAACTCCTGACGCCCCATCAGAACGAGTGTCAAATGAGCGTCACGAGCGTCATTTCAGCGTCAAGATATCGCCCGTATCACCCACACCGTACATAATGCGCACACACAAAACCGCAGGTCAGACGCCCTTCACGGCTGGTTCAAGGATCGCGACGCA

# Questionable array : NO	 Score: 5.46
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.45,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGGTCCCCGCGCACGCGGGGGTGGTCCCT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [4,1] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.30,-13.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [4-6] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [30.0-31.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.78,4.87   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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