Array 1 347190-347368 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP072386.1 Arachnia propionica strain F0231 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =================================== ================== 347190 37 100.0 33 ..................................... TGACCGCTAGTGCGCTGCAGGCTATTAGGCCAA 347260 37 100.0 35 ..................................... ACATCCCGGACCGTCAGCATGCTGTCGTCAGTCAT 347332 37 83.8 0 ....................C.......A....GGTA | ========== ====== ====== ====== ===================================== =================================== ================== 3 37 94.6 34 GTCTGAAACCACCGCGAACCTCAAAGCGGATTGAAAC # Left flank : GCCTACGGGGACCGCATCCAGTACTCCGTTTTCCTGCTCGGCATCACCCCGGAGGAACTGGTGGAAATCCAGAGCCGGGCAGCAGACATCATCGACGAGAACACGGACTCACTGTGGATCGTGAGACAGTGCGCGGCCTGCTGGGAGGAGGCCCGGACCCTGGGTCAGGCCCATCCACCGGCCCGGGTGCTGCACTACGCGGTGATGTGAAGAATCCTGCCGGATCCGCCGATGCCTGGCAGAGCGGGTCGGGAGGTGGCATGAGGGTAGAGTTGGAGGAAGCCGGCAATCCCGGCTGCCCGCAGCCGGGGGTTTTGGAGACACCCTCGGACAGGGGTGGTTGGAGAACGACCAAAAACAGCCTCAGGTGTGTATGCCACTTGACTAGGGGTTTTACCCCATTTAGGACAGGTGCTGTCCGCTTGTCGGAGAGGGTGAAGAGGGGTGGTGTGTAAAACCGCCGCAACAGGGCTTGTCAGGACGGCGTGTCAAGGGGTAGG # Right flank : AGGATTTGGCACCAGTGGCGGCATTTTTGCTGTCATTGATGTCTTCCGCAACTGAGGGTTATTGAACCGATTTGTGGGTTTGGGTGAGTGGGGTGCGTCAAGGTCAGCTTGTGGAATGCTGAGTGGGTAGCCGGTCCGTCAGCCGGGTGTAATCGGGTGCCTTTATCTTGAATCGTGTCCGGATGTTTTGAGTGCCATTCCGTAATTCGTCCACTGAGTCGTCGGCGATGGGTGATGAACTCGGGGCGGCCGTGACATCGCTACAGGGTGGGGTGCGCAGGGCCCGGGCTGTGCGTCGCTCGGGCGGACATTCGTGGGAGCAGGCCCCCGTCGCCCGGCGGTGGTGGTGCGTCGTCACGAGGGCGTTTCCGCGGTTTGTGTAAGTGGTTAGATAACGAAAGTTAAGGTGGGCGGGTCGGGGCTTGTCATCCGAATGGCTGGCATTTCGCGGAAACTGACGGCGTCCAGTGTCCGTAGGGCGCGGAAAATCGTGGTTTTGG # Questionable array : NO Score: 5.09 # Score Detail : 1:0, 2:0, 3:3, 4:0.73, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAAACCACCGCGAACCTCAAAGCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [13,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.00,-6.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA // Array 2 634548-637081 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP072386.1 Arachnia propionica strain F0231 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 634548 36 69.4 36 AAGTATG.A..A.....T.......A.......... CGCGACCCATAGTTTCGTGCCGTACCCCGCTTATTT 634620 36 100.0 38 .................................... GTGCGGCGTGTCGGTATCCCAACATGGGACCGCGCCGG 634694 36 97.2 36 ............T....................... CACGGATCTGCTGGGAGCAGTGCTGCGGGTGCGGGG 634766 36 97.2 39 .................T.................. TCTTCCCCGCTGCTCTGGTCGAGCAGGCGCTGCGGTCCT 634841 36 100.0 39 .................................... GCGGTAGCTGGACGTGCCGGGCAGGATGCTGCCTCGGGC 634916 36 94.4 41 C............A...................... CGTCGCTTCTGGTACCAGCTCTCGAATCCCTCGATGGAGTC 634993 36 100.0 38 .................................... TTTTTCAGCTGCGCACCAATCAACGTGCCGAGCTCGTT 635067 36 100.0 39 .................................... GCCCCAGGGCCTTGGCCAGCTTGGCGCGACGACGCCACA 635142 36 100.0 37 .................................... GCCGCAAGCTCGACCTCGCCGCCCTGTGGGGCGACGA 635215 36 100.0 37 .................................... GCGGCAGCTGGGCCAGCCACGTCACCCAGCTACCCGG 635288 36 100.0 37 .................................... GCCACGAATACACCGTCGACCGCGCCGAGGCTGAGGC 635361 36 100.0 39 .................................... TACGTGGGGCGCCCAGTTCGGCGACGCCAGCGACACCGC 635436 36 100.0 39 .................................... TACGTGGGGCGCCCAGTTCGGCGACGCCAGCGACACCGC 635511 36 100.0 33 .................................... TGCCCGGTCCTTGATGGGGTCGTCGGTGATGAG 635580 36 100.0 38 .................................... GAGCTGTGACTGTGGCAGAGTTGATGGAACAGCTGTCC 635654 36 100.0 37 .................................... GACATGTCGGTTCATGGGGACTCCTTGGGGTGAGATA 635727 36 100.0 39 .................................... TTGATCGGCGCGGCCGAACCGGTATTGGAAAATACCCCC 635802 36 100.0 37 .................................... GGCGGCTGCCCTGGCCGATGGACCTCGCGGGGGCCTT 635875 36 100.0 38 .................................... TGGCACACCAGGGCTGGACCCCCGTCGACGAGCAAAAG 635949 36 100.0 38 .................................... CGGCCGCGGCCTTTCGTGACTTCGACCTGGGCCACCCC 636023 36 100.0 36 .................................... CTCGATCGCGCGGGCCCAATGATTCGCAGCCAACCG 636095 36 100.0 35 .................................... GCCACGAAGCCCACTGTGTGGGCGGCGCTATGGCA 636166 36 97.2 36 .............T...................... CTCGATCGCGCGGGCCCAATGATTCGCAGCCAACCG 636238 36 100.0 36 .................................... CTGGACAACCTCGACCTCAGCAGCTGTGGTCAGGAA 636310 36 100.0 37 .................................... CGGTGACCAGGGAGCCGGCGATGATGACGGCCAGGTC 636383 36 100.0 39 .................................... CCGCACCTACGGGCCGTGGGTGCCCTCCAGTGGGGCCGC 636458 36 100.0 36 .................................... GACCTCCAGGTCGAGGCCCGGATCTACGGGATGACT 636530 36 100.0 37 .................................... CAGCCCTCACTGAGGACCTGGTCCTCGACCTGATGCA 636603 36 100.0 35 .................................... GGGCGCTCGAAGAACGGCGTGCGACGTGGCAGATT 636674 36 100.0 40 .................................... GGATGCGGCGATCCGCCTCTACCAAGAGGCACACGGCATC 636750 36 100.0 40 .................................... GGGGTGTACTGCCCACCCCGCAGGAACGCGACAACGCGCT 636826 36 100.0 37 .................................... GGGAGAAAAGATGTTTCATCTCGAAATTGTTCCGATC 636899 36 100.0 38 .................................... GCCTCAAGGGTATGGCCATGTACGCCGACGATCTCCCC 636973 36 100.0 37 .................................... GCGGTGACGTCACCACCACTTTGGAGATTCTCACCAA 637046 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================= ================== 35 36 98.7 38 GTCGCAATGGAGCCTGACCTTTGAGGTCAGGAAAAG # Left flank : TGCCGGCCATCTTCCTTCCCCCTTCGTCCCAGGGAACGGCAGCGGAAGAGGTCGTGTAGCCCCAACACAGCCTGCAACCAGGGCTGCGATGCGTCAGCCAGCCCAGCCCGATCGCTTTCGGCATGCGATCCAGTGCCGTGGTGGGGCGAGAGACACGGAGGTGTGGCCCCGCCACCGTCGTCATCGTGCGACGCGGGCTCAGCTGTGTATTTTGCTCCGCCGTGACCTGGCGAGATCACCCTGACCGGCGGGTCTTGGGGTGAGAACGCGGTCACCGTCACCCCCCGCACCGCGTGACCTGGCGAGATCACCCTGACCGGCGGGTCTTGGTGCTTCCAGGAGCGTTGCGCAGCGCCCCGTCTGTTCATCGAAGTCAGGATGCGATTCTGACGAACCAAGACCGCTTATCAAACAAACATAGCGGCAATTGAGAACGATCAAGATCGACAGGATGGATTCATGATGGAACCTTCAAGAATCTGTGTATGGATGACGTGGGG # Right flank : GGGGCTCGCGATTTCTTTGGTCTCTGACTACTAGTATTACACGGGTCTGCGAGCGCCGACCAGCTGGGGCGTGCGTGAAGGGTTGTTCGTTCTCCGTAAGTGGAGTGAAACCTGCTCTGACTAGGGTGCGAGCGCTCCCCAGGGGTTTGGTGGGTACCGGAGCGCTCGCGTGGTAGCTAGACAATCTGCGGCCCTCTGGTGGGTAGGTCCTCGTGGTGCCCGACGAAGATGAACCGATCCTCGCCGATCTCGCCCAGGTCCACGATGACCACCGAGTCGACGGCCAAGTTCATGATCTTCTCTCCAGCTGCTCTCAAGCGAATCAGCTCAGACCTGTTGAGGTCACAGATGAAAACGGAGTACTGGAGGCGTTCTCCATGGGCCTCCATCAGCTTGCAGATTCGCCGCAGCCTTCCGGGTTCGCGGATGTCATATGCCACCAGATAGCGCCGCCTCCGTGTCTTCATCTGGTCACCATCGCAGTGTACTGGTCCAGTTCG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAATGGAGCCTGACCTTTGAGGTCAGGAAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.01,0.41 Confidence: MEDIUM] # Array family : NA // Array 3 2884299-2875238 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP072386.1 Arachnia propionica strain F0231 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================================================================================================= ================== 2884298 36 100.0 37 .................................... GAACTGACGCCCAGTGAAGCCGTACGTGGCCCGCCAC 2884225 36 100.0 36 .................................... ACTTCGGTGCCGCCCCACGCCTTGATCTTCTCGTAC 2884153 36 100.0 37 .................................... CGACAACTTGTCGTAATAGCCGGCGGTGCGCATGTTA 2884080 36 100.0 37 .................................... ATGCCCTGCTGGGTCGACTTCAGCCAGTTCAACTCCC 2884007 36 100.0 37 .................................... CGGACGGGCCCCTTGACGCTGCTCGTTTTTTGCTCAG 2883934 36 100.0 36 .................................... GATTCTGGGAAGAGGATGATAGCCCTTGATACCAAA 2883862 36 100.0 38 .................................... AGGAATGCGCTGGACAAATACCTCGAAACCTCACCCGG 2883788 36 100.0 37 .................................... GTGTGGAAGTACATGGATTCGATACGGGGCAGGCGGC 2883715 36 100.0 36 .................................... TTGCCGGCTGTCTCCGTGCGTTCGAGGAAGGGCGGC 2883643 36 100.0 36 .................................... GAGGCTGCGCTTGCCGCGGCCGTCGACGCCGCGCAA 2883571 36 100.0 35 .................................... ATGAATTCGGAATGGAATCTCAGCCTTGTCCATAT 2883500 36 100.0 36 .................................... AATTCGGCACCCCGGGAGAATTGAAAGATTATTTGC 2883428 36 100.0 37 .................................... CAATATCCCCGTGCGATAATATGCCACCCAACTTCTC 2883355 36 100.0 38 .................................... TCCTCTTCTAGCTTACTACAGTTTCGCGTCTAACGCAT 2883281 36 100.0 36 .................................... TCGTACAACCCCATCGGATTGGCGAACGAACGATTC 2883209 36 100.0 35 .................................... GAGGACAGCGGCGATACGATCCATGTCGCAAACAC 2883138 36 100.0 36 .................................... TGAAGCGGCAGGTACAGCGCTACGCGAGTAGCGCCC 2883066 36 100.0 37 .................................... TCTGCCACGATTACCTTTCCGGCAGCGGCCGCGAATG 2882993 36 100.0 36 .................................... CGCGAGGGTGTTGTAGACCGAGGCTGATTCCTCGCC 2882921 36 100.0 35 .................................... GGTTACGTTCCATGAATCCACAAAGGAGGTCAGCG 2882850 36 100.0 39 .................................... CGAACAGGAGCGATACGCTCTTTGCATGCAGCCAGCCTG 2882775 36 100.0 37 .................................... ACCCCACCAAGCTGGGCGCGTGGAAAAAAGAATACAA 2882702 36 100.0 37 .................................... AAGGCGGGCGTCCGACGGGAGCGAAGGGAAGCCACCC 2882629 36 100.0 36 .................................... GTAGGACTGTGCGCCGTTCGTGTACAGGGCATATTC 2882557 36 100.0 38 .................................... GGCGGATCTGCGCGGAAGTCTTGCATCATGCGCGGAAA 2882483 36 100.0 40 .................................... CCGTGCGGATCCGATCCCACACATAGCGTTGCCACCAGTA 2882407 36 100.0 36 .................................... AGGGGGCATGACCGCAGAGAGACGATCGATCAAAGA 2882335 36 100.0 35 .................................... GGACCTACGGCTATCATGCAATCATTATCGACACC 2882264 36 100.0 36 .................................... ACGTCGTCGGCCACGGATCGGAACGCACCCTGGAGC 2882192 36 100.0 38 .................................... GACATAAAGCGAAGTAACAAGGGCGCTAATGCCATCAA 2882118 36 100.0 37 .................................... TGCCAAAGGCTTGGCGGCCTCGGCCAGACCCAGACGA 2882045 36 100.0 39 .................................... CAACTTGGAAACGGACCACCTGGGTGGTCCATGGACCAG 2881970 36 100.0 36 .................................... ACTGAGATCATGGAGACCCCTGGCCCTAACCCGGCG 2881898 36 100.0 37 .................................... AAGAAGTTCTTCAGGTTTTCGCCAAACTCTTTGACTT 2881825 36 100.0 38 .................................... GACGGTGGCGAGTTCGCCTTCCATGATGTTGGCCGCGA 2881751 36 100.0 37 .................................... AGTGTTGCCTGCTGGCAAGCACGGATCATGATTCCAT 2881678 36 100.0 37 .................................... AAGTGGTTCTCGAGCGACCTGAGGGTGAGGTACTGAA 2881605 36 100.0 38 .................................... TGGAAGGCCGAGCATGGCCCTACGATACTTCACCGCGG 2881531 36 100.0 38 .................................... TTTTCACTTTCCCGGTTTTCGGCGTGCGGACCACGGGC 2881457 36 100.0 39 .................................... GCCTCGGTCGGCTGCACCTCGACAGGAGGCTGTACCTCA 2881382 36 100.0 39 .................................... CCGGTTGGAGACCGTCAATGATCTCGACGATCGCCTGGT 2881307 36 100.0 36 .................................... CCGCAAATACACATCGTGGTGAAGCTTTGTCTCTTC 2881235 36 100.0 37 .................................... TGCCGGGTGGAGGGACATCGATCGTCACGGACTGGCC 2881162 36 100.0 35 .................................... TGTACCGTGACAGTCATGCCGCCCAGCTCCTGGGC 2881091 36 100.0 38 .................................... TGCTTCAGCCGTGACGGCAGCATTTGATAGCCAACGGG 2881017 36 100.0 39 .................................... ATGTCCTCAGTGCTGCTCCAGGTGGGCAACTTCAACGGG 2880942 36 100.0 40 .................................... GCGATCCCCCTCGAGAGATTGTTGGAGATGCGGGTGCGGA 2880866 36 100.0 38 .................................... TACTGGGACGGCCGCTACGACGACTGGGTGATGGCCGC 2880792 36 100.0 36 .................................... AAGAATGTGCCCGCGAACCTCTGCGGTCACACCGGC 2880720 36 100.0 39 .................................... TACGGAATGGGGGCGGCTTCGTTCCGGGATTACGCCCGG 2880645 36 100.0 36 .................................... GTGCTCCAGGGCACTCACCCACTCCGTCTCCACAAT 2880573 36 100.0 38 .................................... GCAATGAACACGGGTGCATAGTCCAGCCACGTGTCCCC 2880499 36 100.0 38 .................................... CGTGTACTCGGTGTTCAACCTGTCAATCCGCCCCGCTG 2880425 36 100.0 37 .................................... ATCAGCTGAATCAATACCTGAAACTTTGAAAGCGTAA 2880352 36 100.0 37 .................................... AGTGATTTCTTAGTGGCCGCAAAATCATAGATATCCG 2880279 36 100.0 36 .................................... AACAACGCTGAGGACAACTACGACCGTAAGTACAGG 2880207 36 100.0 39 .................................... CTCACCAATCCCCGCGGAGCATACACGCCGGTTCGTCTC 2880132 36 100.0 37 .................................... TTGGCGGCAGTGGTCGCGGATGGCCTTGGCGGGATTC 2880059 36 100.0 35 .................................... GATACGACCCAGATAGGGGCCGAATTTCTCGCCGC 2879988 36 100.0 35 .................................... TACCGCGCCCCCGGCTTTTGCTTTTTGACCCATTC 2879917 36 100.0 38 .................................... AAAATAAACCTTGTCGTATACGCCCTTTGCCAGTTCTG 2879843 36 100.0 37 .................................... AACTTGTCGTGGCTGGTGAATGCCCACCACACAAGGC 2879770 36 100.0 38 .................................... CAGCCGCCGAACAGGCCTTTGTGGATGGCGATGATCTG 2879696 36 100.0 37 .................................... GGGTTGGAGCTTCATGCCGCGGCCGCCTTCCGGAAGG 2879623 36 100.0 35 .................................... GAGCGCGTCGGCCTCGGGTGGCGTTGGCGCTGCCT 2879552 36 100.0 38 .................................... ACGCTGCGGTGTGAGCCCAGTCTTCACGCGACTCTCTG 2879478 36 100.0 35 .................................... TCCTGCATCTTCTCACGGGTCTCCGTGAGAATCTC 2879407 36 100.0 37 .................................... AACTTGTCGTGGCTGGTGAATGCCCACCACACAAGGC 2879334 36 100.0 39 .................................... CCGTAAACTTCCGATTCAAGCGCATTGATGATTCCGCGC 2879259 36 100.0 37 .................................... TGTAAGTCGCTCATTCTGCACAGTGAGCGCATTGTTC 2879186 36 100.0 38 .................................... ATACCATAGTCATTGGCGTGCGACAGGAACGATTCGGA 2879112 36 100.0 37 .................................... TTTCTTGATCATACGGACTCCTTGTGTACGTGTGGAA 2879039 36 100.0 37 .................................... GCGGATTCGGAGGAATGATACAGGCGGAGATCTGCAA 2878966 36 100.0 38 .................................... GTCGGGGACGGGGCCGAGATAGAGGGTGGCCCAGTCGG 2878892 36 100.0 37 .................................... CCCTGGAAGACGTTGTGAGTCAACTCAGTGTCCTTCG 2878819 36 100.0 39 .................................... CCGGTGAAGACCTTGATCTCGATTCCGGGCGCGTAGTCC 2878744 36 100.0 37 .................................... ATTTATTTGGACAGCTCCGCCTCGCACCACAGTCTCG 2878671 36 100.0 38 .................................... AATTATTTGTTCCGAGAAAAGAAGTTGACGGGTACCCG 2878597 36 100.0 35 .................................... GGATGGTATCTCGGTAAACCTCTTCCCAGCCACCC 2878526 36 100.0 35 .................................... GGATGGTATCTCGGTAAACCTCTTCCCAGCCACCC 2878455 36 100.0 37 .................................... CTTCCTTCCGTGTTGGGCCACCAGTCGGGGAACGCGG 2878382 36 100.0 37 .................................... GGTACGGGGCCGTTTCACCTCGGTGCCGCCCCACGCC 2878309 36 97.2 37 ................................G... GGGTCGAGACCCCTGGAAAGCTGACGCTTTCCAGGGG 2878236 36 100.0 43 .................................... GCCAGGAGTCTTCGGATTCCTCGTACCAGTCGATGGACGCGAG 2878157 36 100.0 43 .................................... GCCAGGAGTCTTCGGATTCCTCGTACCAGTCGATGGACGCGAG 2878078 36 94.4 38 ..........T....C.................... ACCTCCGTAGTCGAACTCACCGCCCACCGCATCAGCAA 2878004 36 94.4 38 ..........T....C.................... TTCATGTCGTTGGCGTAGTCGGCGTAGGCGGGGCCGGC 2877930 36 94.4 39 ..........T....C.................... CATTTTGACGTCAGGCGCGCTTACGCTCCAGAACGACGG 2877855 36 94.4 37 ..........T....C.................... TCAGCAGAGCCTTGCTGGCCGGCATCAGGAGATCCGT 2877782 36 94.4 35 ..........T....C.................... TGGCCGCTGGCCCGCGCTCCCCGGCCGGGCCTACC 2877711 36 94.4 40 ..........T....C.................... TATTCATCACGTTTCTGCGGCGCGGCCATGAGCTGGGCGA 2877635 36 94.4 36 ..........T....C.................... ACATACCACTTGACCTGTCCAAACGTTCAATCCCAG 2877563 36 94.4 35 ..........T....C.................... CTTCAGATCGCTCATGACGACCTCGGACATGGTTG 2877492 36 94.4 37 ..........T....C.................... TTTCGAACCGCGGGGTTCGTCAACTACAGAATGTCCT 2877419 36 91.7 38 .......T..T....C.................... AGGACATCCATGTCTCCGATGACGTCGAGACTGGGCTT 2877345 36 94.4 36 ..........T....C.................... TCTTGGAACAGATGCCGGTGGATCGCTTGGAGATGG 2877273 36 94.4 37 ..........T....C.................... GACGGGCATTGCTCAACTCGCACCCGCATGGGGCGCG 2877200 36 94.4 37 ..........T....C.................... ATCTGCAATGTCCCGTGGGACGCGGAATACAATAATG 2877127 36 94.4 35 ..........T....C.................... TTCATTCTGCGCGGCCAGTGCGTTGTTCATGTCTC 2877056 36 94.4 41 ..........T....C.................... GAGTGTGTCATCGTCTACCGCGCCCTCCCCAGCTTTGACGA 2876979 36 97.2 38 ..........T......................... CGGCCATTGTTGATGAAGTCCTCGATACACAATTTCTT 2876905 36 94.4 38 ..........T....C.................... ACACCCATCCACTCGGGGGCGGCCACAGATCCGGTCTG 2876831 36 97.2 37 ..........T......................... GTCACGAATCTCAACAAAAGACAAATTCCGCCCTTTG 2876758 36 94.4 40 ..........T....C.................... ACGGGATCCTGTTCGTGCCACAGCTCAACGATGAAGTCAC 2876682 36 94.4 38 ..........T....C.................... GGTTCTGTTGACGGTTTCGAAGTCGGCGAACCCCGCTT 2876608 36 94.4 38 ..........T....C.................... AGCTCGTTGGAGGGGGCGTTCCCCTGGAAGACGTTGTG 2876534 36 94.4 37 ..........T....C.................... AGTTCGTTGGCGTACACCTTTTTAGCAGAGGGGCTTT 2876461 36 94.4 41 ..........T....C.................... CAGTCGCGGTGCATGAGTGCGCAGTTGTCGCGGTCGTAGGG 2876384 36 94.4 37 ..........T....C.................... CACTTCGGGACGGAGGTCTGCTTGAGACCGGCGTCGC 2876311 36 91.7 38 ..........T....C...........T........ ATCATGGTTCTCGTCGGTCCCCATGTCAAGGTAGAGAG 2876237 36 91.7 36 ..........T....C........G........... AATCGCTTCCGCAACGACGTCGCACTGGGATTCCAT 2876165 36 97.2 36 ..........T......................... GGCTCCCCTGCAAAGTTCTTGAACTTGATTACCGCG 2876093 36 100.0 38 .................................... GCGAATGATGAACTCGCCGGCCGCGCCCGTATCAGCAA 2876019 36 88.9 38 ..........T..C.C..........A......... GGATCCGTCACCACCACCGACGAAAGCCCCCGCTCCAG 2875945 36 88.9 37 .......T..T....C..........A......... GGCACGGCCATGGTCATGGCCGCGGCGGGTTTCCCCG 2875872 36 91.7 43 ..........T...T...........A......... ATGGGATGCAGTCATGGCGCGGGGGTGATGGTTTCGGCGACGA 2875793 36 86.1 119 .......T..T....C....T.....A......... GTTTTGATTGCCAAATCATTGCAGAAGTCATAGACACATTGAAGCTTACTCACGGCCCTTCCCAAGTGTGCGCTGGCTAGGGGTTTTCCTGGCTGGTGCGCCGTCTGTGAATAAGCCTT 2875638 36 91.7 39 .......................C..AT........ ACTACGATTGTCCACCACAACAATTCCGTTCTGAATTGG 2875563 36 91.7 37 ..........................A.......GT CGGGGTTGGGATCAGCGCGGCCGGGTCATTGCGGTTC 2875490 36 94.4 36 C.........T......................... TTGTCCAGATGCCAGGCCTCCTCAGTTGCCTTCACG 2875418 36 94.4 36 ...........T....G................... GGGGGTGCCACCGCCGACGCCGTCGGCGCTCTCTCC 2875346 36 91.7 37 ............C...........T.C......... GTCACCCCAGAGGCAACGTTTTTCGCGTCGACGACGA 2875273 36 88.9 0 ................G..T......C.......G. | ========== ====== ====== ====== ==================================== ======================================================================================================================= ================== 123 36 98.0 38 ATTGTTCCGGCCTTCTAGGCCGGACTTCATTGAGAC # Left flank : GGGAGAACTGGATTCCTACACCCCATTGATGACGAGGTGACCCATGGCCCGACGAAGATATCTCATTTCCTATGACATATCGGATCCCAAGCGGCTGCGAGCCACCTTCAACCTCATGAAGGGCTACGGGAAGTGGCTCCAGTACTCGGTGTTCGTGTGTGACCTGAGCAAGGCTGAACTCGCAATGTGGGAACGGGACATTCGTGATGTGATAGCACTCGCCTACGATTCGGTGGTGGTGATCGACCTCGGTGCCCCGCAAGACGCAGACATCCGTATGCTTGGGGTACCGCGTAGGTTGCCCGATGAGGGGCCCGTGGTGGTGTGAGCCGCTGCGAGACCTCCGGTCATGTCGTCTCCCCTAGGGAGCGCTCGAAGGGGTTTGACTAGGTGTTTTACCCCATGACAACTCAACAGAGTGGTTTTATAGGACCCGGCGGTGCGGAGAGCTCGCAGGTGCTGGTAAAGTTCCTAGCCAAGGCGGCCTTTTGAGGCGAGGT # Right flank : CATCCGGCCATGTTCAGTGCTTGTTTCCGCGCCGCGGGCTGTTTCGGCTTTCTGGGGTGGATTCCGTCGATAAGCTGAAGCGAAGCTGTCGTGGCTTCTTGATTACTGTCAAGGTGGGCATTCTTTGGGAGAGCGGTGTCGCCTACCCCTTTGTGCACTAATCGCCGGGGAAACCAGAACGGCGGTCTTGCTCCGTCGGCGGTTTCCCCGGCGATTCTTATGCGAAATATGAAATCTTGTTCGCAGGTGTGGGTGAAAGTGATCCCCCTGATGTTTTTCTACAGGCTGCTCATCGACGGTTGACGCCCTTGGTTAGGCGGGCTTGAGGATGGGCATGAACAAATTTCGTGAAATCTCTCGCGATGGGATCGCGACCTGCTGGCCTTGTTGGCCTTACGCGTGCAGGTGCTCCTTGTGCTTTTCTGCCACCTTTTCCGACTCCAGTTGCAGGGTGCAGTGCTCGATGCGGATCTCGTGATGTTTGATCAGGCACTCCTGGA # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.05, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGTTCCGGCCTTCTAGGCCGGACTTCATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-14.40,-14.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [48-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //