Array 1 295813-298622 **** Predicted by CRISPRDetect 2.4 *** >NZ_MRCI01000001.1 Neptunomonas phycophila strain CECT 8716 CONTIG1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ===================================================== ================== 295813 28 100.0 32 ............................ TGATGCGACAACACCAGACGATGCGAGTTACA 295873 28 100.0 32 ............................ ATAGTAAGCGGCTTTAAAGATTTAGTTTTTTC 295933 28 100.0 32 ............................ ATTATTGCTGGCTTTCAAGCTTGTCAATAGGG 295993 28 100.0 32 ............................ CATTTCTTGATATGTCAGCAACAGAGCCATTG 296053 28 100.0 32 ............................ TAGAATAACATCAGGGCCACGAACAACAGAAA 296113 28 100.0 32 ............................ TGACATTAAGATTACTCGTGCTGATGTTGCAT 296173 28 100.0 32 ............................ TCATAATTTTGTAAATTTGAATATTGCGAAAT 296233 28 100.0 32 ............................ GATCAGAGCGCGAACATGAGCATGTAACAGTG 296293 28 100.0 32 ............................ GCGCTTAGTGCCGACGTTTCGCCGCCTACTGT 296353 28 100.0 32 ............................ AGGTGCGGGGAAGTCTCTCTATGCTACTAAAC 296413 28 100.0 32 ............................ TATTGCCAGTTTGTAGATTTCGATACCCTTTA 296473 28 100.0 32 ............................ ATCAACTCATAACCACGGCGCACGATTGCCTC 296533 28 100.0 32 ............................ TTCTTGAACCTGTGGCGAGGTGTAATACCCAT 296593 28 100.0 32 ............................ TGTCGGTTCTATTGTCTTCTATGATGAGTGTC 296653 28 100.0 32 ............................ TTGAATCGCGCCGCCAAGGGCGACAAGGGCCT 296713 28 100.0 32 ............................ GCAAATAGCTCTGCACATATTAACTTAGCCAG 296773 28 100.0 32 ............................ TGCACTGCTTTCGGTGCGGCGGGCGAGGAGTG 296833 28 100.0 32 ............................ TTCTGTGTATGCTATATCGTTTGTGCCGACGC 296893 28 100.0 32 ............................ TTATGGAATAGACAGCATAGGCATTAACAACA 296953 28 100.0 32 ............................ AACAGAAGCCGAAATAAAATACCAGCAAGCAC 297013 28 100.0 32 ............................ CATAACCCCTACCGCCGGGGCAACTATTGATT 297073 28 100.0 32 ............................ TCCATTCCTGTCCAGTCAAAAATCTTTGTATA 297133 28 100.0 32 ............................ TCGCGGCGCTAAGTGCAGTAAGGAGCAACATG 297193 28 100.0 32 ............................ ATTCAATACACCGATAAAGAAAAAGGCACAGT 297253 28 100.0 32 ............................ CGCTAGGGGCGCTTTGAATGGGTTAATCAATG 297313 28 100.0 32 ............................ GCAAGTGGAGCGTATATCGCCGTTTGATCTGT 297373 28 100.0 32 ............................ GTGAACAGCACATTGATGTTTCCTACGCTACG 297433 28 100.0 32 ............................ AAAGGGCAGGCTTGTAAGTGTTGAGCCGCCAA 297493 28 100.0 32 ............................ TAATAAATAAAGGAGTATCTGGGCGCTCAATT 297553 28 100.0 32 ............................ AAACGGTACTACCGGTAATCATGGTTCAACTG 297613 28 100.0 32 ............................ GAAATCGTATGATTACGACGAAGATCAAGAGC 297673 28 100.0 32 ............................ AGCTTGATGATGAAGCTATTGCGCTACTCAAC 297733 28 100.0 32 ............................ TAAAGGACATTCAATATCATCTTCATATTTTA 297793 28 100.0 32 ............................ AGCGCGTAAGGCGGCGTTAGCGCGTCACCTTG 297853 28 100.0 32 ............................ GAAGGTGATCCAGCATATGCTTCAGGCCCAGG 297913 28 100.0 33 ............................ CGCAAGGGGCGCTCTGAATGGGTTAATCAATGC 297974 28 100.0 32 ............................ GGCAGGCGGCTAAAAACGTATTCACCCATATC 298034 28 100.0 32 ............................ TCCTCGCCCAAGGCGCGATACCTTTAACTTGT 298094 28 100.0 32 ............................ GAGAAGCTAGCGCAAATCAAAGAATCAGGCGG 298154 28 100.0 32 ............................ ACACTACCGAAGCTGACATTAAAGAGCTTCAA 298214 28 100.0 32 ............................ GATCCGCTCATGGGGATTACAGCGCATTGCAA 298274 28 100.0 32 ............................ CTTTCGGTGATCAGGGTAAGCAGCAAAGAACT 298334 28 100.0 32 ............................ ATAAGAATTTTGAGCATGAGAGACAAGAACCG 298394 28 89.3 53 A.C.........G............... CGCGAAAGAAACAGTGTTTTTAATTGAATTTGATCCGGTGACGCCGTGCTTTT 298475 28 89.3 32 A.C.........G............... ACTTCAACTAGTGCTGCTCTCTTGTGTGACTC 298535 28 100.0 32 ............................ ACCCAGTGCGATGACTTGTGCGGCTAACGAGC 298595 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ===================================================== ================== 47 28 99.5 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : AGCTAGTGCATTACATGATTTGCAAGATTTAGAGTGGCTGGGAGCATTATCTGGTTATTGTCAGTTTAGTGCCGTTTCTGCGGTGCCTGAACAAGTGAAATACCGCGTTGTTTCAGTTAAACGCAGTAATTTAAGTAAAGCCAAGTTAAAACGTTTAATTGCTCGAGGCAGTATAGATAAAGAAGGTGAGAAGCGTTACAAAGTCAAAATGCTCAGCCAAGGGTTTGATAACCCTTACCTTGACTTGTTTAGTGGCTCAACAGGGCAGGTACACCGTAAATTTTTTGAATTTGGTGAGTTACAACCAAATCCAACGAGCGGAAAGTTTGATTCATATGGATTAAGCACCACAGCTACCGTACCTTGGTTTTAACCTATTTTTTTGCTCTTTAAAAATTCATTTTAAAAACAATAAGTTACAATGGTGGTTTTTAATAAGGTAAAAGAGTGTTTTTATCCTAACTGCTTGTTGTAACTTATTTTTATGCTGCTAATCTATT # Right flank : AATACAATAACCTGTTGGCTAGGGTAGCGCCCGGTTATCAGAGGCTGGGCGCGTGTTTAACAATTGCCTAAAAAACTGTCTCGATAATACGCTGATTGGAATGTTCTATATGAGCTTTGAGTAGTTCACAGGCGGTTTTGTCATCTCGTTTAAACGCGGCTTCCATGATGAGTTTATGGTCATCTTGATGGGCTGTGTTTTGAGTGTCGTTAGTCGTTTGCTCTGGTTGATGGATAAGTGACAGTCGGCGATATCGTTCGGATTGATCATAGAGTGTTGATAAAAAACGTAATTGCCATTGTGATGGGCATTGGCTGATCAGTGCCAGATGAAAGAGCCTGTTTTCTCTAATCAGTTCGCCTGCCATGGCTTCGCGTTGGCCTATGGCTTGTTGTTTGATGGTGATTTCGCGATGGCGTGCTCCGGCGATGTTTGCTTCCCAGTTGAGATCGCCCAGCCGAATAGACTGTGCCAACGCATCTACTTCTAGCATGACTCGT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //