Array 1 168926-169883 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LCZZ01000030.1 Streptococcus agalactiae strain SH0334 ctg7180000003655, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    168926	    36	 100.0	    30	....................................	TGGTGTTACGGTCATTGGTTCTAACCGCTA	
    168992	    36	 100.0	    30	....................................	TCAGTTGCATAACCATAGTCAATACCGTTA	
    169058	    36	 100.0	    30	....................................	TGTTGATAGAGACTTTATTGTTATAGTTCT	
    169124	    36	 100.0	    30	....................................	ACAAGGTTGGGCTGTTTGTAAGTTTGAAAA	
    169190	    36	 100.0	    30	....................................	GAGCCAGTCTTTTGCTTTCTATACCACTTG	
    169256	    36	 100.0	    30	....................................	AGTTTAGAGTTAACGTCTGTATTTTAGATA	
    169322	    36	 100.0	    30	....................................	TACGTCGATAACAAAATATACACCTTTTAT	
    169388	    36	 100.0	    30	....................................	AGCTCTTCTAGCTACGTTTACGGCTGTTAT	
    169454	    36	 100.0	    30	....................................	ATAAGCACCAAGTTCTCGCGTTACTCGCGA	
    169520	    36	 100.0	    30	....................................	CGTACCATCTATCAATTTACCGCAAGCTGT	
    169586	    36	 100.0	    30	....................................	CCGATTATTTCCTACATAATACGCACGTTT	
    169652	    36	 100.0	    28	....................................	TTTTACCAATGCTTCCATATCGCTTATA  	
    169716	    36	 100.0	    30	....................................	TACTTGACGAATTGAAGATGACGGAATTTA	
    169782	    36	 100.0	    30	....................................	TGGTTATACATTTACTAATCCATCAGCATT	
    169848	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        15	    36	 100.0	    30	GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	                              	       

# Left flank :   CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG
# Right flank :  CAAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATG

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:58.33%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-4.70,-0.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.87,0   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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