Array 1 30554-32531 **** Predicted by CRISPRDetect 2.4 *** >NZ_VEGP01000019.1 Paenibacillus sp. 32O-W strain DE0098 NODE_19_length_88226_cov_13.886987, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 30554 32 100.0 33 ................................ GGATATACGATGGAGCCAAAGAATTGCGTTTTG 30619 32 100.0 36 ................................ GAAGTACTGAGTATCAATGTGAGTGGCACAAGTACC 30687 32 100.0 36 ................................ TTCCTCTGTGGGCATTTCATTTAGGTCATTCATGTA 30755 32 100.0 34 ................................ TGAACATCGTCCGTATTGGGAAAACAAAGGCAGT 30821 32 100.0 33 ................................ ATAGTCGCCTGCTACAAGCGGGCGTGGATTGAA 30886 32 100.0 33 ................................ GTCTTCGTTGGCTTGTGCCACCAGTTCAAGGTA 30951 32 100.0 35 ................................ CGGCGTTTCCAATGGATGCAGCTCCCCGGCACAAT 31018 32 100.0 33 ................................ CACCCAATCTTCACCTGAATAATACGGCCCCTC 31083 32 100.0 34 ................................ ATCTGGCTTTTCGTTTTTTCAACGAAGTAATGTT 31149 32 100.0 34 ................................ GCTGACCTTGAATCCAGATTCCCTAAACTCATCG 31215 32 100.0 38 ................................ TTAACGCCGGTCAACACGTCGATTGCCATCTGATGGAC 31285 32 100.0 34 ................................ GCTGATGCCGGGTCCAGAGAGATATTCGTAAAGC 31351 32 100.0 38 ................................ TCGGCAACATACAGCAACAACGGCAACCTCCCACGGCA 31421 32 100.0 35 ................................ TGGGGCTGTATCAAAGAATAAGTTCGCGTGCCATT 31488 32 100.0 38 ................................ TAGTGTGTCAGCTGCGGCGAATTCAGCCAGTTCCTCCA 31558 32 100.0 36 ................................ ATGTCGCTGAGCAGACGGATGAAAAACACGCGGATA 31626 32 100.0 33 ................................ TTTTCTTTTGGTTTAGGATTTCTTTCGTACAGT 31691 32 100.0 34 ................................ AGGGATGCTATCCGCAAAGGGACAAAGAACCTCG 31757 32 100.0 35 ................................ CGCCGGGACCTCTCCGAACCCTGTTGTACAGGTAA 31824 32 100.0 34 ................................ CCTATTTTACAGCGGATTCTACTATCCGTTGTAT 31890 32 100.0 36 ................................ CCTTTATCCCCTTCCATCTGCTATAATGGACTTAAG 31958 32 100.0 35 ................................ CGTGAGTGTGATCCGGTGTTGTAAGATAGAAATCG 32025 32 100.0 36 ................................ TCTACATAAATGGAGCAAACCGGGGCGCCGCGCAAA 32093 32 100.0 36 ................................ CAACACGAAGTTTGTCTTGAGATCGACCGGTTGAAA 32161 32 100.0 38 ................................ TTGGAGTGATTCTTAAGCAAACCCCTAAATTTCCAAGT 32231 32 100.0 34 ................................ AATATCGAATTTATGAAATCCGTTGCGGATCTGA 32297 32 96.9 33 .....G.......................... AATCGGATTTAGGAAGCAGCAGCCTAAATGGAT 32362 32 93.8 38 ...........T......A............. GGTCTCCTTCTTAGGCTTTTCCGGCTCCCCTGCTGGAG 32432 32 96.9 37 ..................A............. CACTTGACCGGATTTAATATACTTAACTGCGCTTATC 32501 31 81.2 0 .........A...TA..........-CC.... | ========== ====== ====== ====== ================================ ====================================== ================== 30 32 99.0 35 GTCGCACTCTACGCGAGTGCGTGGATTGAAAT # Left flank : TTTGCGTAATTCCGGTAAATCTCGGGAAAGACGAGCAAAAGTGCAGGTCTTTTTCCGCAAAACGCTGAAAATCCGCAAAATGGCTGAATTTACCTGCACAATTGCACGTCTTTTGCTGTTTTTGGCTTAAATCGTTCCGAAGACCTGCACTTTTGCAGGTCCTTGAGCGCCTCGTCCTCATTCATTGACCTTTAAATCTAAAAAGTTAGGAAAGGTACGGTCTGCTGTTGATAGCGAGTTTTGAATAAACTTTATTTAGAAGAGATAATATTAAATCTGGTAACTTTACGGAATTTTAATGAGTAGTGCCGTTATGAGATATAGTTTAAAGAAGTGCGAACCTATAGCTCACATGCAAACCCCGGGAAACTCGCACCGACGTAACGACGCGGGTTTTTGGCATTTTTGCAGATTTTGTTGGCAGTATGAACCTCGCAAAATGGAGATTCGCACTTTTAACTGTTTGAGCCCTTGTGGTATGCTGGATTTGGCAGCACCCT # Right flank : TCAATTGCCCGTTATTCGTTGTTATACGTCGCTCTGCATACCGGAGTGTAGAATCGAATCATTTATAGGAGACTGCAAATAGCAGTGCTCCTTTTCGGCTTCTCTTTGATTAAGATGCAGAGAAAAGGGGAATGCTGGTGACTGAAAGGGGCGGGAGATGCTGCCCTCTGGACGGCAAGCTGACGATCCATTGGAGGAAAGAAGGAGTGCCATGGTGAAATCGGATGAATTGGTTAAATATATTACCCAGCAAGTAGTTACTTATATCGACACCCCGCGTGAAATCAGACGGGAAAGGAAGCAGCAAAGGAAACAGGCGAAATCTATGGAGGGGTGGACGGTTCGCTGGTTCGGGCTGATTCCTGTTTCTCTACGGATGTATTATGATCAGCGCAAACGTAAAAAGTAAAAAGCTCTGCACCGCTTGTCGCGGGCAGAGCTTTTTTTCTCATTCCTGCGGCTGTTGAAACCATTGACCCGTTTGTTGAAGCTGTTCAAAC # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACGCGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.70,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 176-2603 **** Predicted by CRISPRDetect 2.4 *** >NZ_VEGP01000113.1 Paenibacillus sp. 32O-W strain DE0098 NODE_113_length_9133_cov_13.818905, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 176 32 100.0 35 ................................ TTTAAGGAAAGGGGGTGGAAGTCTTGTCGTTTCGA 243 32 100.0 34 ................................ ATACTGCTTGAATGCACATATAGATAACTTCATT 309 32 100.0 35 ................................ AATTTCACCCCCTCCTTTTACTTTCGATATTTCCA 376 32 100.0 33 ................................ TTACTTAAATTAGCGATTGAAAGATATTAATAA 441 32 100.0 35 ................................ AAGGAAGCTCAGGCCAAGAATACTAAAACGGATGG 508 32 100.0 35 ................................ ATGGCTAACACATGACCTTATTACTACCAAATTGC 575 32 100.0 35 ................................ AAGCATTGGAGCAATGATCGGGAGCCGAGGACATA 642 32 100.0 34 ................................ TTACAGCCAAGGAACAACAGGGGATGCCCTAACA 708 32 100.0 35 ................................ CTTTTTCTGCCTTTAAGTAACCAATCACATAATAT 775 32 100.0 34 ................................ ATTGGAGCAGGGAAGGTTAACCCATTCTCCAACA 841 32 100.0 34 ................................ ACGCTGGATCAAACTTTACAAAAAATCAATCTAT 907 32 100.0 33 ................................ GTGCTGAACAGGATTTAAAAACAAAAGATATTA 972 32 100.0 36 ................................ CCTTTTGCATGTCGTATATAGTGTCAGTACGGACGT 1040 32 100.0 34 ................................ GAGGAGGCATTCAAGGCGTTCGTATCTACGCTTA 1106 32 100.0 34 ................................ ATCGTTGGTACGCCGATCTACTAGCGAACCCGGC 1172 32 100.0 33 ................................ CAACTGTATGGTCGTCGTCTGGCCTGCAGCTAA 1237 32 100.0 37 ................................ ATCTCTTCTATCTCCCGGTAATATTCATCTTCGTCTG 1306 32 100.0 35 ................................ GACAGTTCCCGGGGACAAGCGAGCTCCAATGTAAC 1373 32 100.0 37 ................................ ACGGGATTGGAGCCAGAAACGGAATATCAAGTATACA 1442 32 100.0 34 ................................ AGAGAGAAGGAAAAAATCAGATGAATTAGAACTT 1508 32 100.0 34 ................................ GTAACTGCTTGATGCGATGAATTGCTCCAGTTCA 1574 32 100.0 34 ................................ ATCAAATCACCTTCCTGATCACTGTTTGCCAGGA 1640 32 100.0 34 ................................ TATGCTTGCTGTGGACGTGCTCCCATCATTTACA 1706 32 100.0 34 ................................ GGCCAGGTACGTCAGTACGGCCACGCCAGCGGAG 1772 32 100.0 36 ................................ CGCATCATCGACGACAGCCGGGAGGAGGGCGCAGAG 1840 32 100.0 34 ................................ GAGCCTATTACAACGGGGATGGGCAGGTGATCAA 1906 32 100.0 34 ................................ ATCATTCTCCTTTCCTGCGCTTAATAAATACTGA 1972 32 100.0 34 ................................ AGATATTCCGTGTCCTGGTGCGAATACGCTGGAG 2038 32 100.0 34 ................................ AGACAAAAACAGGAACGCAATTAGAGATATTGCC 2104 32 100.0 35 ................................ CGCGGTGATAGACATCCTTATCAGTATGGAGCAAC 2171 32 100.0 34 ................................ TCCTGCTTGCACATCGGGCAAATGTAAACGTCCA 2237 32 100.0 35 ................................ CAAGAAGAAATATGACATCGTGGAGTTCGTAACAA 2304 32 100.0 37 ................................ CATGTATTTTTTGCCTCTGCTGCTGATCTTCTTTATC 2373 32 100.0 34 ................................ CAAAGGGTCATTATAGCGAGTGAAAAGATGCTCA 2439 32 90.6 36 ..........A.GC.................. CGGGCGTAAACGACATAATCACCGCCCCGATCTTCG 2507 32 87.5 33 ..........A.GC.................C AGGAACGTTTGTTCCTATTATAACATAGATTTA 2572 32 90.6 0 ..........A..C.............T.... | ========== ====== ====== ====== ================================ ===================================== ================== 37 32 99.2 35 GTCGCACTCTGCATGAGTGCGTGGATTGAAAT # Left flank : TATTTAGCGAAATATTTTCTAACAATTGACGTTATGACTGATTACCAATTACTTACTTGAACTGCATAGGTCATGTTTATTAATTAGCATTACAATTAATGGTTTTTAATCCTAAAAGAGTAATATATTTGTGTTTAGATAACCCTTTTTGCATACAAAATGTCGATTTTCCGCCG # Right flank : TGAAGCCAGCCGAAGAGTCACAAGTGCTGGCAGCGAACCCCAGTGGCTTCTGGAATATGAAACCCATATCCGGATAGTCTGATGTTCATGCGCAGAAATACCTATACCTCATTCCTGAAAGTGAATAAAGTACTATTCACCCATAATGTAATCCCTTCTTTTACCAAATATATTCATAAAGGAATAAATTCCGTATCTAATAATGGGATCGCTCCCTTCTTTTTAGGTCTTTGTTTCTATTTACAGTCCTGAAAACTTTGCGTTAACTTATTAATCAAAATGTCTATGGATATGGATACGGAAAAGAGGAGGATACGAAGGAATGTGTTTATCAAGAGGTAAGCGTTCTATTTGGGGGATGTTCGTTGCGTTTGCGATCCTGATTGGTTTGGTGATACAATCCATCCCGGAGGCGTCTGCTAACTCGGACCAAAATATCGAGCTTCTGCGATCTGAGCATAAGGTCATTGACGGCAAAATGAAAGTAACCGCAGACGTCC # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTGCATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 35239-37376 **** Predicted by CRISPRDetect 2.4 *** >NZ_VEGP01000043.1 Paenibacillus sp. 32O-W strain DE0098 NODE_43_length_45972_cov_16.213073, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 35239 32 100.0 34 ................................ TTGTCGCGGTCGTAGATGATATTCGGATCATAGT 35305 32 100.0 34 ................................ GCGTAGCCCTTGTTAGGATGCTGCTCTGATTCCT 35371 32 100.0 35 ................................ CACTATGAAAAAAGCCATCGAGTGGTTATTGTTTA 35438 32 100.0 35 ................................ TGGAGTGAATCGCTCTTAAGACGAATGAATAACAA 35505 32 100.0 34 ................................ ACCCTCCCCCTGGGGGTATACTGGTAGGGGTACC 35571 32 100.0 35 ................................ CCGACATAGCCCGAGGAACCCTAGCAGAATTAAAG 35638 32 100.0 37 ................................ CGCGATCGTGATGGGAAACACTTGGATGAACTTGATC 35707 32 100.0 33 ................................ CGACGTGAGGGGAATTTGTCCTCCCCCTGCATC 35772 32 100.0 36 ................................ ACGGATATGGGTATAAGGGAATCAATCCGCTTGATG 35840 32 100.0 34 ................................ GGGTCATCTGTGCCGTTGAATTTACCCTTGCCCT 35906 32 100.0 37 ................................ AATTAGCGAGTTGATGGGGAGGTGAGAATACGATGAA 35975 32 100.0 35 ................................ TCCTCCCCCTCTGATTTGGCACGCATTTTGTACTG 36042 32 100.0 37 ................................ ATCGACCACAAGTCCATTATCTACCTTGAAGAGTTTC 36111 32 100.0 36 ................................ CTTTAAGGTTCATACACCGTCACCACTCCCGGTACA 36179 32 100.0 37 ................................ GCATCTTATCGGAGTCGGTCGCCAAGTTGCCGCTTAA 36248 32 100.0 35 ................................ GCACATGGCCGCGAGATTTTCGAGGGGCAAGCGGA 36315 32 100.0 34 ................................ TTCAGAAAACCGGTCGAAGTCTGGCAAGACGGTC 36381 32 100.0 38 ................................ CGGCCGCTTTTTAACGTAATTGTATGCGCCACTGGCGG 36451 32 100.0 37 ................................ ATTATAAGGCGCTGTAAACGGTCCTATTTCGCTAGTT 36520 32 100.0 39 ................................ CGCAACTTCTGGCACTCGTGGCCCTCTTCGTCTTTCCAG 36591 32 100.0 34 ................................ GCAGACCGACACGGTCCGTATACCGAAATTGTAC 36657 32 100.0 37 ................................ GTGACGTACTGGATCGATCGTCGTGGAACCGTAATAT 36726 32 100.0 38 ................................ TATTGCTTTAAAGAGGGCTTTTGAATTTGATCGTTCGA 36796 32 100.0 37 ................................ GTATAGAGTCCGATTAGGCGCTGCTCGTTGCGTTGTC 36865 32 100.0 35 ................................ TTTGGTCATTGGGCTACCTCCATAGGTTTATTTGG 36932 32 100.0 37 ................................ TATTTCCTCATTTTTTTGATCAATGGTGTATATTTCA 37001 32 100.0 38 ................................ CAGCCAGCTGCGGGTGTTTTTCACGTAATTTATTGCAG 37071 32 100.0 37 ................................ TGCCATCCAGTCACAGGTGAAAAGGGATATTTTGATT 37140 32 90.6 35 ..........ACG................... AGAGAGGTCGGCAGCTCACCCGGGACGAAACAATG 37207 32 100.0 37 ................................ CGAAATTGGTCGTCCGTTAACGGTTCGCCGTAATTCG 37276 32 90.6 37 ..........ACG................... ATAACAGCGCGACGCTCATACTCCTGAATGATGGAGC 37345 32 96.9 0 ..........A..................... | ========== ====== ====== ====== ================================ ======================================= ================== 32 32 99.3 36 GTCGCACTCTGTACGAGTGCGTGGATTGAAAT # Left flank : TTTGCGTAATTCCGGTAAATCTCGGGAATGACGAGCAAAAGTGCAGGTGATTTTCCGCAAAACGCTGAAAATTAATTAAAATGGCTGAATTTACCTGCACAATTGCACGTCTTTTGCTGTTTTTGGCTAAAATCGTTCTGAAGACCTGCACTTTTGCAGGTCCTTGATGGCCTTGCTCCTTTAATTGACGTCGTAACTTTAGAAGGTAAAGCAGGAGTGCGATCTGGTTTTGGAAAGAAAAGTTTGAAGGCCTTATTTTCAATAGGTTACTTTACTTGGAAATATTTACAAAATATTAGTGAATAATGCGTAATCAGGTCTAGTTTGAACAAAGTGCGAACCTATAGCTCACATGAAAACCCCGGGAAACTCGCACCGGCGTAACGACGCGGGTTTTTGGCATTTTTGCAGGTTTTGTCGGCAGTATGATCCTTACAAAATAGAGGTTCGCACTTTTAACTGTTTGAGCCCTTATGGTATGCTGGATTTGGCAGCACCCT # Right flank : TATCATGCGCATGGCGTCCAGCGTATCCCAAACGCTCCCACTCTACAGAGTGTATCGACTGCTCGCCATTCGAATCAATCATAGGAGACTGCAAATAGTAGGGCTCCTTTTTTGTTTTTGTTCGTATTGGAAACGGTTTACAATTTTGTAACAAATGAAAGTGGGTATAATGGAGGAGTTTGTCTGGCTATGTCGAATGATAAATATAGGAAATTAATCCTATGAAATGGAGGGGTTGGTTTTTCTTTCTTTATATTCATAATTGCATTATTAGGATCAGCAATGAAAGGAGTGGGGTCAACTAAGTTGTCATTCATTGCAATTTGCTAACCCTTTTTAACTTTCTTAATAAACACAAGTCCATATTTATAAAATCGCTCCCCGCATAGAAGCATGACTTGTAACGTTTATGATAGCGAGCATTAGGAGGAGAGTCATGGGCTATATTGCGCATATTCGCGAAAGTGACGGGGCTATTCAAACGGTGCAGACGCATTTAG # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTGTACGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.70,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //