Array 1 39917-37528 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIWX01000010.1 Campylobacter curvus strain SS177624 contig00010, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =========================================================================================================================================== ================== 39916 30 100.0 38 .............................. TTCGATGTTTGAACGAGATCATCAAGAGCCGGAGTATC 39848 30 100.0 37 .............................. TTCGCCTTGTCTGCTATTAGGGGAATAAATTCCCCTA 39781 30 100.0 36 .............................. TATAAATCTCATCACATCACCATATACGACAAATTC 39715 30 100.0 36 .............................. GGAAATCGAGTGACAAATTTCAAACCCGAAGCCAAA 39649 30 100.0 37 .............................. ATGTATTCGTGCTTGATAAAAGATCCTCTAAAATGAG 39582 30 100.0 37 .............................. ACGAGTAAATTTACATCTTTTCTCGGCTTTGGGCTGG 39515 30 100.0 36 .............................. TTCGTAGTGGTTGCGTGGTTGTCGTAGCTATTAGGG 39449 30 100.0 37 .............................. CATCCCCCGCCAAGACTTTGCAGCGCGGCAAGGCTTT 39382 30 100.0 36 .............................. AAACGGGTAATTTGATCGGTGCGCGGCTCATTCGTG 39316 30 100.0 37 .............................. TTGTCGTTTCTTGGATTTTCGCCAAAAGAGTTGTTCC 39249 30 100.0 37 .............................. GCAGTAGCTCTTTGCCCTCTGTGTCCGTAACACTCGC 39182 30 100.0 34 .............................. CCGAAAATTTCAAGATTTAAGATGAAGGCGTATA 39118 30 100.0 34 .............................. TCGTCTTGTACTCATCGTCAAATGCGGCATCTTT 39054 30 100.0 34 .............................. TCAAATTTAGGAAGCTCCACAAAATCGCACGGGT 38990 30 100.0 36 .............................. TTCTGATCTTGAAATCCTTTATAATTTGCATATTGA 38924 30 100.0 37 .............................. CCTTTACAATAGCACTTAGCTACACCTTCAGGCGTAG 38857 30 100.0 34 .............................. CTCTAAATGGCGATGAGATCACGGGATTAAATGG 38793 30 100.0 35 .............................. CGCTTGATTGTCTTTGGCTCGTCATATCTTGCCAT 38728 30 100.0 37 .............................. TCTGTGATGTAATAGAAATTGTCTTTTCTATATAGAT 38661 30 100.0 38 .............................. GAACCAAAAAGAAAAAATTCGTAACTTTCAGTCACATT 38593 30 100.0 37 .............................. TTTATCAGGCTCGGAGCGTTTACGGATAGGCCTTTCC 38526 30 100.0 36 .............................. TTTGATAACCAAAACGATCGGCTGGAAAAACGCACT 38460 30 100.0 37 .............................. TGCATCCGCGTCAAAGACAGGCAAAAAATGCTTGAAG 38393 30 100.0 35 .............................. AAAACTGTGCAAAGCGACGACAGGATCACACTAGA 38328 30 100.0 37 .............................. TGTCTTTTGTTTGAGTATCTTTGTCGCCACCAATCAA 38261 30 100.0 35 .............................. AACAAAGGGGCTTTTAGGCGAAAGTGTTTTAAAAC 38196 30 100.0 36 .............................. CACAAAATAAAAATAGCTTAGGCTTTAAGAAAGGAA 38130 30 100.0 37 .............................. ATAGCTCAAAACAAGCAAGATAAGGCACAAATGCTTT 38063 30 100.0 36 .............................. CAAGTATTGACTGCCACCATAAAAACGCCTGCCAAG 37997 30 100.0 38 .............................. GCGAGATAAAAAATAAGCTCTTAGAAAGAAACACCCTC 37929 30 100.0 36 .............................. AGAAATAATGCGATAAATGCCAACTATGAAGATGAA 37863 30 100.0 38 .............................. GAGTAGTAACATCTATCAATGCATGAATAGACACAATC 37795 30 100.0 35 .............................. CTATATCCTAGCTGATACTAATACATACACCATCA 37730 30 93.3 139 .........................T...T ATGGCCAATACCTAATTATTCCAAAAATTTAATACCTTGAAAACTGTATAAAAAATAAATAGCCTCTATTTCTAACCAACAAATACCAAATTTCTTTAGTCTATACTTGTTTGTAGTATAATTACGAGATATTTATTTG T,T [37701,37703] 37559 30 76.7 0 ...........AA.T.A..A.....T...G | T,T [37547,37554] ========== ====== ====== ====== ============================== =========================================================================================================================================== ================== 35 30 99.1 39 GTTAAAATTTATTCCGTTGGAATTTGAAAC # Left flank : ATTGATTTTTAAATTTCAAAGCATAGGAATGCGAACATCATTCTAGCAAAAGCATTGCACGAGCCTATCGTTGTCGATTTTTCTGTTTTTACTTTATCTTACTCAAACGCTGTTCGCATTTTTCTCTTTTTAAGATGCTTCACACTACGCTCGCAACCGTACACGCAAGTAAAGCAAAAAGATTTCTTTTAAATGCCATTTGCATACGCGCCGCACCTTGAAGCGAGTATTAAGATTTGATTATAGCAGAGCATATTTTTTACAAAAAACCTGCTTGATTATCTTATGCACAGGTTTGAATGCTAGTTTAATGCTTTAATTATTAGGGCGTTTTATAACAAAGAGTTTGATAAAACGATAATAAAGCTTGTTCTAAGATTTTGATAATGCCCTATTTTCTAGGTTTTTGCTTGCTAACAATTTTAAATTTTAACTATTTTTAAGATATAAAAATATAGACTTTTAATTTTAATGGCCCTGAAATTTGATATTTTGGTGCT # Right flank : TATCGAGAGCATATTATAAGTATAATTCAAAACAAATATTTTATGCCCCTTAGAAGATGACATTTATGTAAAACTTTTAAAGTTCAATAGCAAGCACCTCAAAAAATAAATTTCATCAAAATACTTAAAAGTTAAAGACTAGCCAAAAACCAGTCAATGTACTTTATGTTTTAGTTAATATATCTAAAATTACTACTAATGCCATATGGTGAGCGTAGATCAAATAATGATATTCAAAAATATAAGGAGCAAGTAGTCCATGCTTAATACAACAAAACACACGAGTTTTATAAGATGGCACTAAAAATACTTTTTTCTCCGAGCGAAAGCAAGAGCACATTTGCAGGGGATAGCTACATACGAAAAGAAAATTTCACCTTTGCTAAGCTCTTTCATCTAAGGCTTGAAATTTTAAAAAAATACGCTTCATTCGTAAAAACGGCAAGCGATAAGGAGCTTTGCAAGCTTTTTGGTTTTAAAAATTTAGATACCGACGATAC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAATTTATTCCGTTGGAATTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.40,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //