Array 1 277031-277660 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CDEP01000005.1 Streptococcus agalactiae strain Bangui-IP-59, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    277031	    36	 100.0	    30	....................................	CAATGGTGAAAGTGAAAGAACGGTCTTTCT	
    277097	    36	 100.0	    30	....................................	ATTGTGATACAGATAGTTTATATCTAAAAA	
    277163	    36	 100.0	    30	....................................	AACATTAGCCTTTTCTAACTCTTCAGCTGT	
    277229	    36	 100.0	    30	....................................	TATGTCTTCTAACAGTTGCTTCTTGTGCTT	
    277295	    36	 100.0	    30	....................................	CCGTCAAACAAGAGCGACAGCGAAACAAGC	
    277361	    36	 100.0	    30	....................................	TTAACAGTTTCAAGTCTGTCTTGTTACTTA	
    277427	    36	 100.0	    30	....................................	ATATGTTCCACTCTATGAATTTAGGCTCAT	
    277493	    36	 100.0	    30	....................................	TTTTTACCAATGCTTCCATATCGCTTATAT	
    277559	    36	 100.0	    30	....................................	TACTTGACGAATTGAAGATGACGGAATTTA	
    277625	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        10	    36	 100.0	    30	GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	                              	       

# Left flank :   ACGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGA
# Right flank :  CAAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATG

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:58.33%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-4.70,-0.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.87,0   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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