Array 1 936654-934046 **** Predicted by CRISPRDetect 2.4 *** >NZ_LVDU01000001.1 Shewanella algae strain YHL scaffold00001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 936653 28 100.0 32 ............................ TAGACAGAGCAGAGAAAAAAAAGGCTATCACT 936593 28 100.0 32 ............................ GTAAGTGTCGCGCTCCGGGTTGTGTTCAATCA 936533 28 100.0 32 ............................ TATGAAAAGGAACTGGCCAACCTTGGCGAGGA 936473 28 100.0 32 ............................ TTAACCGTGCCAATGATAGGGCATACATGGCA 936413 28 100.0 32 ............................ TCATCGACAACGAACAGCGGCCCCTGGCCTTT 936353 28 100.0 32 ............................ TTCCACTCTTAGAGCTGTCTTGGTTGATATAC 936293 28 100.0 32 ............................ TGACAACTTGGCATCAATGCACGTTAGTGCTA 936233 28 100.0 32 ............................ TCATATTCAGCAACAAGTGCAAGCTGCCTATC 936173 28 100.0 32 ............................ TGCCCCTGACTTGGTGCAATTCTCTGGTATCT 936113 28 100.0 32 ............................ GCCATTTCTGGCATGGTCTCCCACCAAACAAA 936053 28 100.0 32 ............................ TATCGCGCCTGTTTTATCCTAGACCGTGTTAA 935993 28 100.0 32 ............................ TCTACGTCCATGACGTGGGAACGCCAGACCCC 935933 28 100.0 32 ............................ AGCCTGGCCAGTGAAATCCTGTTGTTCGTTTA 935873 28 100.0 32 ............................ CAAACCCTGAATACTTTTGCCGGGGCTTTACC 935813 28 100.0 32 ............................ ATCCACACCTCAAACCACAGACATCTACGTCA 935753 28 100.0 32 ............................ TGGACCCGGATCCGATATTCATCTGCCCAAGA 935693 28 100.0 32 ............................ TTGATAAAAAGAGGGCATTTTTTTGCCTTTCT 935633 28 100.0 32 ............................ GTTGTGCCGATATACCCTAATATTTCGTCCCC 935573 28 100.0 32 ............................ TTTGTAACTGTAGAAGTGGCGGTGATTGCTGG 935513 28 100.0 32 ............................ GCCGGAATTATACAGACCGGGGCGGATTGACG 935453 28 100.0 32 ............................ CATCTAAAGGAGGCAGCATGAAAAACAAACTG 935393 28 100.0 32 ............................ TATTTAAGAAAGCGATCTGGGACTGAAAAACA 935333 28 100.0 32 ............................ ATTGACATAAACCGCATCGACAGTGACAGTGA 935273 28 100.0 32 ............................ TGTTGACCGGCCTCTTGAAAATCTTCAAATGA 935213 28 100.0 32 ............................ GACCCGGACTTTGTTCGCATCGACGGCGTGCC 935153 28 96.4 32 ..........A................. ATCTTGCACCAGAAACTCGGCCTGCATAATTT 935093 28 100.0 32 ............................ CGAACTTTACCCCGGTTTCCCGGGGTTACTCC 935033 28 100.0 32 ............................ CACGCACCGCCCAGTAATGGCACCAGCATGTG 934973 28 100.0 32 ............................ ATTCGTGACATGACGAACTTACGGTCAGATAC 934913 28 100.0 32 ............................ TTATTAAGGATGGCTCTGATTATGAGCTTGGG 934853 28 100.0 32 ............................ ACCAAAGCCGGATCAGGGTGGTGATAGTGGCG 934793 28 100.0 32 ............................ TTACTTGTTGGGCGGCCATGACGGGTTTTACT 934733 28 100.0 32 ............................ AGCCGCAACCCTCAACATAATCACTACCTCAA 934673 28 100.0 32 ............................ GATGAGTTGGTATCCACTATGATTGTTGAGGC 934613 28 100.0 32 ............................ TAACAGGGTCGTTTCATAAATTCATTTTGATT 934553 28 100.0 32 ............................ GCCCACATCTGGTTTGTTGGCATCAGGAAAAT 934493 28 100.0 32 ............................ ATGATCCTTAAGTTCTTTTGTTACAGTCTTGC 934433 28 100.0 32 ............................ ATTATCTGCACGTCGAGCGGTTTCCCACTTAG 934373 28 100.0 32 ............................ GTGGGAGTTGTTCCCAACAAGCAAAGCAAAGG 934313 28 100.0 32 ............................ CTGCTTATCACTTCGAGCCGCTGGCTGCTGAA 934253 28 96.4 32 ..........A................. CTACTTTGGTGAAACGATAGCGATCCATAGCT 934193 28 96.4 32 ..........A................. TGGCGCAGATAACGTGGGTCCACCCATTTGTA 934133 28 100.0 32 ............................ GGACAGCTGCCGATGAACAGCAAATGCCGTTC 934073 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 44 28 99.8 32 GTTCACTGCCGCCCAGGCAGCTTAGAAA # Left flank : CGAGTGATGTTTCCTACGTGAGCTTTGTACGCAAACAGGTGAAATCGCCTGAGCGGATTGAGCGGGCTATGCAGCAAAAGGCGGCATTATGGGCTGCAAAGTCGGGCAAGCCGCTGGCCGAGTGCTTAACCGATCTTGAAAAAAGCAAACCGACTAGGCAGTGTGATTTGCCATTTATCTTCTTGCACAGCCAGCAAACGAAACAACGTTCGCCGGACAAAAACAGCAAGTTCCCGCTGTTTATCGAAAGATATCCGCAAAGTACACCTGTGGATGGGCTGTTCGATTGCTACGGGCTGAGTCGTAAAGTTAATGGTATTGCATCGCTTGGAACAGTACCGCACTTTTAAGCACCAAAGGGTGAGTTTTACCCTTTATTTTTGCTCTTTAAAAATAAGCTTTATATACAATCAGTTACAACAGGTAGTATTCAACAGGGTAAAAATAGGTTTTTTATCCTAACCACCTGTTGTGACTTTCTTTTATTGATTTATTCTATT # Right flank : GTTCTTCTGGTGATGACCTTTCCCCCGAATTTATCACTCGGCCCCAGCAAAATCCGAACGTCCTGCATTTGTGGGGCTGAAGAGGTCGAAACTGAGGTGATCTAAATAGCGGCCCGGCTCAAGGCAGCATATCCACTCGAAGTAGTCTGCTGGCGCTGCGGCCTTTGTCGTCGCTGACCGACAGTTGGAAGCGTCCGGCTCTGGGTGGGCGCCATTCCAGGGTTTGTCCCGGCAGGCTCTGGCCGAGCAGGCTGTTACCGGCAAACCAGTAGAGTATTTGGCTGTCGGAGGCGGCGTCGGCCTTGAGGGCGATGTGTTCATTGGCCACGCTTTGGCGCAGGCTGTAGGTGACGCCTTTCAAGGGGGAGCGGATAAGCGGGGCAGCGTAGCTAACCGCGACTCTTTGGCTGCAGGCGGCCGGAAGCTCCGGCGGCCTCCTGCGGGGTAAACCTGCCTGCTCGAACAGGGCCGCCAAGTCTGACGGCCAGAAGGCAAACACC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCCCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCCCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [48.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //