Array 1 1030687-1028807 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOOA01000002.1 Ruminococcus sp. HUN007 CC97DRAFT_scf7180000000020_quiver.2_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 1030686 32 100.0 34 ................................ TCAAATACCGTCGATGCCATGAACACAACACTGA 1030620 32 100.0 35 ................................ GATAAGGCAACGTCTACATGGGAAGCGAAAACATG 1030553 32 100.0 34 ................................ GGCCGATATGTTCACGAAGGAAGCACACGACACG 1030487 32 100.0 33 ................................ ACTGTTGTTCGCGTTTATCGCCCTCGTATTAAA 1030422 32 100.0 35 ................................ AAGAAATGCAAGGAAACGTTTAAATGTTGGGAATG 1030355 32 100.0 38 ................................ TAATCGAATGATTTACCCGTTCCGCACGGTCCGAGCAG 1030285 32 100.0 33 ................................ TAATTCCTGAACAGAAGGAAACAAAGCCGGCGA 1030220 32 100.0 34 ................................ AGCCCTACGAGAATGACCGAGAACGAGGGTGTAA 1030154 32 100.0 34 ................................ ACCCGTATAACAACGGGGGCGGCATGGGTTTCGG 1030088 32 100.0 34 ................................ ATAGATGCACCATAAGCACCAAAGGCATGTACCC 1030022 32 100.0 34 ................................ AAAGTCCATAAACTCCTGTGTTTTGTTGTTACCG 1029956 32 100.0 34 ................................ TATAATGCAGTTACAACTAGTGCAGTAGCTTCTG 1029890 32 100.0 33 ................................ CGTCAGAACACGCTATAACGCTCAAAGAATTAT 1029825 32 100.0 33 ................................ TGTAGAGATGTAATAAGTATAAAGTCCAAATAA 1029760 32 100.0 34 ................................ TGACGTACCAGGGGAATTATGCACCGCGAATCAT 1029694 32 100.0 33 ................................ ACAAGTGGCATCGTTGCAATTATTCCGATTATC 1029629 32 100.0 35 ................................ GTTGTATACGGCATGAAGAACGGTTGGCGTTTCAG 1029562 32 100.0 33 ................................ AGCTATAATATGTCCATCATCATCAAGCACGGG 1029497 32 100.0 34 ................................ GAACTTATCATTGAATTATGGAGATGTTCTGAAA 1029431 32 100.0 34 ................................ GCATAGTGGAATGCCTTGGACCACAAACACTTTC 1029365 32 100.0 33 ................................ TGTAAGTCTGAATTGTGCGCAGATCAACAGCCG 1029300 32 100.0 34 ................................ CTCCTTCAGGCAATAGTGTTGCAATGCAGAAACA 1029234 32 100.0 35 ................................ GACACAAGAGTAGGTGCGCCGTCTGAAGTTTCAGC 1029167 32 100.0 33 ................................ CATGCAATGGGGTCGTACTATAAGGCAGTTATC 1029102 32 100.0 33 ................................ AATCCTGACTACATAAGCAAAGTAAACTATTCA 1029037 32 100.0 35 ................................ GGTTTTGTAGTTGACGAAATGGCATATGCGATCAA 1028970 32 100.0 34 ................................ ATCATTCTCAATTGTTTCAAGTATTGAAAGTATT 1028904 32 100.0 34 ................................ ATGGACGAACTCGAAAAGTTTGCAGACAAGCCGA 1028838 32 93.8 0 ...........T..............A..... | ========== ====== ====== ====== ================================ ====================================== ================== 29 32 99.8 34 GTCACGCCTCTCGTAGGCGTGTGAGTTGAAAT # Left flank : TAAATATATAAGAGGTGAAATAGAGGAATATCCATGTTTTCTTATGAAGTAGGTGATCTATAATGATGGTACTTGTGAGTTATGATGTATCTACAACAGATAATAAAGGAAAAACAAGGTTAAGGAAAGTAGCAAAAGAATGTCAGAACTACGGGCAACGTGTTCAGAATTCTGTTTTTGAAATAGATGTTGATTATGGCACTTTTCTTAAAGTGAAAGATAAGCTGCTTAAGCTTATAGATGAATCACAGGATAGCCTTAGATTTTATTATCTGGGGAATAACTGGCACAGAAGAGTTGAACATTACGGAAATAAGGAATCATATGATCCTGAAGGTGTTCTGATTATTTGATGGCGAACCTAAAACAATATAAAAAAGCCGGTAGGTTCGACTGAAAAAATCTGATATTTGTTAATAAGTTGTGAACAAAGACGCAGCTTTTGTTACAATAAAGTCCGTCTATAGTATGGTGTGGCTCCGTTATACACAACATATGGG # Right flank : GCATATCAGTGTGGTGTATGGGTAACAGCATATGGTCACGCCTCTCGTAGGCTCATCATGGACTAGTCTAAAATTATTTGGTTGAAGACATTTTTGAGCAATTATCTGAAAACACGTAAGGAGAATAAAAAATGCGAATAATCCAAGCACAGAAAATGTACAGACATTTCAAAGGCAAGCTGTATTATGTCATCGACATTGCTGAACACACCGAAACAGGTGAAAAGTTTGTTGTATATAAGGCACTTTACGGTGATTATAAAACATATATAAGACCGTATGAAATGTTTCAGTCAGAAGTGGATCATGAGAAATATCCGGATGTAAAGCAGAAATACAGATTTGAACTTGTTGAGTAATAGGCATCATATGAGACTCTGTTACCTGTCTGAATTCTCCTTGGGATGGCAAAAATCCAACAGCACCTAAGAGTAAAGTCAGCATCCTGAAAGGATGTCGGCGGTTATAATTGGCTGCCGGAGGCAGCTTACCATTGAATT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACGCCTCTCGTAGGCGTGTGAGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.70,-4.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA // Array 2 2461517-2461186 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOOA01000002.1 Ruminococcus sp. HUN007 CC97DRAFT_scf7180000000020_quiver.2_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 2461516 37 100.0 35 ..................................... TATGCTTGGAGATTCATGTTGGTTGTCTTATGGGC 2461444 37 100.0 41 ..................................... TTTAAACGGATCGTCTCCGTAGACATAGCACACTGCCCCAC 2461366 37 100.0 36 ..................................... CTTCGTTGAGTCTGACTTTGAATCTTTCCGGGACCG 2461293 37 97.3 33 .....................G............... AATCATCTCCATTTCAAACTTATGCTTCTTTTC 2461223 37 81.1 0 .T...G........C......GA....G........A | T [2461189] ========== ====== ====== ====== ===================================== ========================================= ================== 5 37 95.7 36 GGTTGATATACCCCTTTCACCATTGGGTGTTTGAAAC # Left flank : TATTCGTTTCCTCCTAGTATTTACGTAGTTTTTGATTTGTGTCTTCTTAAGTTTGCTTTTACAGATATTCAGGATCAAGTACCATCATTCTGATCAGCTCCCTTCTGTTTATATAATATGATTTTTCCGGTACTGTTAAGTGATATATGAAAAAAAATATTTTTGCAGCTCAGAACGGGCATTACATAAACGGCTTGATGTCACCATTGTTAAGTGAATACCATATCATTTTCATTGCCATAAATGCTACGCTGCAGTTTCTGCTGTAATAGTTGTTTGCCATATAAAATCATCCTTTCTGAAATCGTGACTGTTTTTGTCTTCTGTATTAATAATATAAAATTTTAGATCTGATTAAGTGATAACTGAAAAATTTATTTACACTGCCCTGAAAATATGGTATAATTTAAGTGTAGCCAGTGGGCGTTTGACATCATTTTAGGGGTATTTAACAAACAAATCAGAAGGAATCGCTTGAAAGCGCGTAATTACGAGGGGGG # Right flank : GAAAAAGCTTCGGAAAGTTAAATCACATCATTCCTGTGATCTTCTTTCCGAAGGTTTTATGTTAATATTCTAAAGCATAAAGAAAAACCGTATATTTCTGAAAACAACATCGTTCAGAAATATACGGTTTTATCAGTTTATAAACAACAAATCAAAGTCTATCATCCAAGAAGTATCTCTCTGGCTATATCCCAGTCGCTCATTTCCGGATGGTTATCAATCATACGATAAATAGAATCAAGCTCCTCACGGGTTATAGAAAGCATATTCATCATAACCTCATCGCTTACCAGTTCTCTGCCTTTTCTAACTGCTGAAACTGACTTTTTAAATTCAGCTATATCTCTTTCTTCGTCTATTTTCATTGCCATTGTCATATAATCCCGCCTCCATTTCTCATTTATCTTAACCTTTTTAACGGCTTTGTCAAGATTATCAGCATAACTTCCCTTTGGCGGTATCTTACCCGCCATATACTGTAAAGTCGCTTTCAGTTCATC # Questionable array : NO Score: 2.85 # Score Detail : 1:0, 2:0, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTGATATACCCCTTTCACCATTGGGTGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.90,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 3 2470311-2469902 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOOA01000002.1 Ruminococcus sp. HUN007 CC97DRAFT_scf7180000000020_quiver.2_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 2470310 37 94.6 37 ..............T......G............... TTCATAATAAAATATACTTTTAAGTTGTGTGACAATA 2470236 37 94.6 37 ..............T......G............... TATATGTTCCGGATATTCTTCTTTAAATTGCATCCAT 2470162 37 100.0 38 ..................................... AGTAACTGATGAGAAATGGTTAAACCGAATTGAAAGAC 2470087 37 100.0 36 ..................................... AGTATTCTATCTGCCACATATACGCATCATTATCAG 2470014 37 100.0 39 ..................................... GCCATAGAGTTTTTGAAAGCAAAGATGCGGTAATTGCCT 2469938 37 97.3 0 ...................................C. | ========== ====== ====== ====== ===================================== ======================================= ================== 6 37 97.8 38 GTTTGGTATACCCCCTTCACCATTGGGTGTTTGAAAC # Left flank : ATATTCTTGTCCTCCTAGTATTTACGTAGTTTTTTTGATTTGTGTCTTCTTAAGGTTGCTGTTAAAGATATTCCGGATTAAGTACCATCATTTCGATCAGCTCCCTTCTGTTTATATAATATGATTTTTCCGGTGCTGTTAAGTGATATATGAAAAAAATATTTTTGCAGCTCAGAACGGGCATTACATAAACGGCTTGATGTCACAATTGTTAAGTGAATACCATATCATTTTCATTGCCATAAATGCTGCGCTGTAGTTTCTGCTGTAATAGTTGTTTGCCATATACGATCATCCTTTCTGAATTCGTGACTGTTTTTGTCTTCTGTATTAATAATATAAAATTTCTGATCTGATTAAGTGATAACTGAAATATTTATTTACACTACCCTGAAAATGTGGTATAATTTAAATATAGCCAGCGGGCGTTTGTCATTATTTCAGGGGTATTTAACAAACAGATCAGAAAGATTCGCTTGAAAGCACGTAATTACGAGGGG # Right flank : AAAGAAAAAGCTTCGGATAGATAATCCACATAGATGTTTATGTGATTATCTTTCCAAAGCTTTCGTTATCTATAAACGCAACAAAGGCAGCAATCCTTGCACGGACTACTGCCTTTTATTTACGCTTTATACTGATCACTTCATGAATACGATGTTAAAGAGCGCTTCCTTGACGTCACCGAATAATTCTGAAAATGTTTCGTAGCTGAAGCTGTAGCTTTCCTTGTGTTCGTATTCCTGTTTTGTCTCTTTTCTTGTTTCCTGTTCGTTACTCATTGGTAAGCGTCAAATAGGCCGTGTCTTTAACAGCTGAATTTGATATGGTAAAATAAACAGAGGCTGTTTTTGCAGTCTCTGTTTTTTTAGATTAGCGCCGCAGGCGCCACTTTTTCCGAGAATGGAACGCCTACGGCGTGCTATTAGAAAACGGACATCAAAGATGTCCGTTGATAAAATGAGGTATGCATTTTTCGAATTCACTAGCAGGTTAACGTCAGCCT # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGGTATACCCCCTTCACCATTGGGTGTTTGAAAC # Alternate repeat : GTTTGGTATACCCCTTTCACCGTTGGGTGTTTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.90,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 4 2496822-2495672 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOOA01000002.1 Ruminococcus sp. HUN007 CC97DRAFT_scf7180000000020_quiver.2_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 2496821 37 100.0 38 ..................................... TATTGAAATTATTCCTCCTCTTTGTCTCGCCATGTAAA 2496746 37 100.0 37 ..................................... ATATATGCTATTCTATCAGCACCCCATATAGCACACA 2496672 37 100.0 38 ..................................... TCGTATACATATTTTGTATACATAAATATGGGTGGGTT 2496597 37 100.0 35 ..................................... GAATAGAAATCCACATCATCAAATCCGTCTGGAAA 2496525 37 100.0 36 ..................................... GTTTAATTTAGCCGGTGCTACAATTACAGATAAGAA 2496452 37 100.0 40 ..................................... TCAAGACGTTGTGTTTTTCACTGACGCATATATTATGCGC 2496375 37 100.0 37 ..................................... CAGCATTTACTGCTCCTTCTAATTCAGAACCTTTGCC 2496301 37 100.0 37 ..................................... GTGATCATCTCTTAACACCTCTCACTAAAAATAAACA 2496227 37 100.0 38 ..................................... GATTCTTTCAAATTCTTCAATATTCATTTTAGAATATC 2496152 37 100.0 35 ..................................... GGAGGAGTTGTTGTTGCTCCAGGCATCTGAGCTGC 2496080 37 100.0 39 ..................................... AATGGTTTTACCATCGACATTTATTTTATCCGGTTTAAA 2496004 37 100.0 39 ..................................... CTTCCTCATCTGACCATCTTTCTGTACCATTTGCGTGTA 2495928 37 100.0 38 ..................................... CATTGGTATCCATTTGATGATTACGAAACCGTGAGACC 2495853 37 100.0 34 ..................................... ATTAATCACACGATTAAGTGTTTCCGGCTTAAGA 2495782 37 100.0 36 ..................................... TTAAGTGCAGATATAGCTCTCTGAATTGCGTGCTGA 2495709 37 100.0 0 ..................................... | C [2495694] ========== ====== ====== ====== ===================================== ======================================== ================== 16 37 100.0 37 GTTTGGTATACCCCCTTCACCGATGGGTGTTTGAAAC # Left flank : CATTGCTTCTTCTGTTCCCCAACTTCTTATTATTCCGTACCTGTCTATTATTCTGCAGCATTTTGTTATTGAATTCTTTTCTACCCTATATCCGCCTCCTGCTGCTATAGTATGCCAGAACAGTCCGGAACCAAGTGCCGGAAGCGGTAAATTCGGCATCTTCATCTTTGTAGGGTCTAGTCCGATAATTCCATGTACTGCTCTTGTTGTCTTTTCGTTGATCATATTATTTTTCCTCCTGTTATTCATGAAATTTTCAATTTATGACATATTGTTTCCGAGGTTAAAAGTGTCCCGGATCAAGTTCCGTCATTCCGATTAACCTCTCTGTTTATATAATATAAAGTTTCATCTGATATTAAGTGATATCTGAAAAATTTATTTACACAGCCATAAATATGTGGTATAATTTAAGTATCGTCAGAGGGCGTTTGTCATTATTTCAGGGGGATTTACAAACAAATCAGATGAAGCCACTTGAAAGTGCGTAATTACGAGGG # Right flank : TTCTGATTGTAGTCGATATCGAAGTCCTCAAACATATTTGATATGACTATCTGACAATGAAATTTATATTTTTTACTGTTAAAAAACAGCGTTCCATACACGGGACGCTGTTTTTATTTATTATCGCTTAACTCTGCATACTTTTTTATATTATATAATTAGGTACTATTATTAAGTACCAATATTATTTATATAAAGGAGCGTGCTTTTTTATGAACTTGTACGTAGACAATTACGAAAGCAAGTTAAGTATTAAGGGAAACCGGCTCGTCGTTACTGAAGCCGGAGCCAGCAAAGAATTTCCGTTAGACAGCATCGATAATCTGGCATTAAACAAGAATGTCCAGATTACATCTCAAGCCATATGTAAACTATGTGAAGCCGGTATAAGCATCTCATGGTTTTCTGCTTCACAGTTCATATGTCAGGCAAATGGTTACGGAACTGAATCCGTGATGAAAGTAAAAAATCAGTTTGCCCTTCTTGATAAGGCAGCATTA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGGTATACCCCCTTCACCGATGGGTGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.80,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 5 2499191-2498568 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOOA01000002.1 Ruminococcus sp. HUN007 CC97DRAFT_scf7180000000020_quiver.2_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 2499190 37 100.0 37 ..................................... GAGTATGGCGAATACTATGTATACTGCATACCATATT 2499116 37 100.0 34 ..................................... GGAACACGCAGACAAGGGCGAACCTATCTCATTC 2499045 37 100.0 34 ..................................... CCCATAGGAGGAGTAAAATGTACTTACTTTTAAT 2498974 37 100.0 38 ..................................... TAGATTCTCTGACACTTCTCTGCTACTGTCTTCTTACC 2498899 37 100.0 37 ..................................... TTCATCAGCAGCATCCACCATAGAATTCTTAATTGCA 2498825 37 100.0 38 ..................................... CATCTCAGATCCAGCATCGATTTCAGTTTCTTCACTGC 2498750 37 97.3 37 ..........T.......................... TTTGCAGAGATTGTCATTAATCTACCCGGAGCAGAGT 2498676 37 100.0 35 ..................................... GGATTAAAAACATTATCAAAGTTTAAGATATTAAA 2498604 37 94.6 0 .....................G..............A | ========== ====== ====== ====== ===================================== ====================================== ================== 9 37 99.1 36 GTTTGGTATACCCCTTTCACCATTGGGTGTTTGAAAC # Left flank : TACAGATTCCACGAAGAAATGGTAAAGGAATCTGACAGACCGGCGTACGAAGTGGTAAGAGGATCTGTCGGCTGGAAGTTCTCTGTATTCGAGAATCCTTACTGGTTTGTTTCAGCCGGAAAGAGCTGAGGTTTAACTGACAAGCAATTTTTCGTCATCTATTAATACAAATCAAAGGCAGCGTTCCTAATACAGAACACTGCCTTTAATTTAACTTTATTACGATGAACTACACTGCCAATTACGCTTACATCTATGCTCGGCATACCATCACTTCCTTTCAACGACTCGGTTTCTTATTTACATCAAGTATTTGTTTTGAGGCTCTGATATATAAGTATTAAATTTCCCGACCAGTTAAGTGACTTCTGAAAAATTTATTTACACACCCCCGAAAATGTGGTATAATTTAAGTATCGCCAGAGGGAGTTTGTCATTATTCTAGGGGTATTTAACAAACAAATCAGAAGAAATCACTTGAAAGCACGTAATTACGAGGG # Right flank : AGGAAAAGCTTCGGATAGATATTTTACATAGGTGTTTATGTAATTATCCTTCCGAAGCTTTCGTTATCTATAAACGCAACAAAGGCAGCAATCCTTGCACGGACTACTGCCTTTTGTTTATGCTTTATTCTGATCACTTCATGAATACGATGTTAAAGAGCGCTTCCTTGACGTCACCGAATAGTTCTGAAAATGTTTCGTAGCTGAAGCTGTAGCTTTCCTTGTGTTCGTATTCCTGCTTTTCCTCTTTTCTTGTTTCCTGTTCGTTGCTCATTATCTCACCTCCGATCTGAATCTGTTTTCCTGCTCTGTTACCAGCTGACGCTGAAATCTATACTTGGCATACCGTTCACCTCTCTTTCGTTTCGGCCTTTGTCTTTCACTACCAACTTACGCTTACATCGATACTCGGCATACTGTTCACCTCTCTTTCATTTCGACTTTTGTCTTTCACTACCAGCTTACGCTTACATCGATACTCGGCATACTGTTCACCTCTC # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGGTATACCCCTTTCACCATTGGGTGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.90,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 6 2825296-2825530 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOOA01000002.1 Ruminococcus sp. HUN007 CC97DRAFT_scf7180000000020_quiver.2_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 2825296 36 100.0 30 .................................... GTTTTCATTAGTTTTCACCCCCTCATTAAA 2825362 36 100.0 31 .................................... CACCTGTGGTTCCTCATAAACCTCAGTTGCT 2825429 36 100.0 30 .................................... CTTTCTGCCTTCATGTTCTGATTACTTGTG 2825495 36 77.8 0 A........T......GT...A....AC.......T | ========== ====== ====== ====== ==================================== =============================== ================== 4 36 94.5 31 GAACTACAACCCTGTAAATATGCAGGGTTCTAAAAC # Left flank : GTTGCAGAAGAAAACGGCAAAATAGTTTCCTCATGCACATGTATCGTTGTACCTAATCTGACAAGGGGCGGCCTGCCGTATGCGCTTGACGAAAATGTCGTAACGCATACCGATTACCGCGGACGGCATCTTGCATCAGCATGTCTGGAGTATGCAGGAAAAATCGCAGAAGAAAATGACTGCTACAAAATAATGCTGATAACCGGATTCCATGATCCGAAAACCCATGACTTCTACAGAAACGCCGGTTACAGCAGTGACGGGAAAACGGCGTATTATCGTCTGATTAAAGAAGTGAACTGGAAAGCATAATGAATATAACTTGCAAAACTGCGACCTTAATCTGTTTATAAATCACATTTGTATCATACAAAAACAACATCATGATTTTTGGCTATAATAATCAAAAATCATGGTTTGAATTTTACTTATAAGCAGTTGATTTCAGCACTTTATTATATTATAATGAAGTTAATTCAAACTGTTTTGTATAGTTTGAA # Right flank : TGCCCATATTTGTACCTCTTACAGTACTTGTATGAACAAAAAATAAGTCTATATCTGAATTGATTTTCAGGTATAGACTTTTTTGTTGCACACTTTTTGCATGGTTACTGAGATGCTGGTATGGTATTATGTAAGTACAGAAGAAATCAAGCCAACAAACGTTAATATGCAGGAGGATAATAGTCATGAATAACGTTGGAAAAACAGTTTTATTTGCTTTGCTCATTATTTATATTGTCTCACCGATTGATGCTTTTCCGGGGCCAATCGATGATGCGATACTTTTGCTGATATCGATTATTGTAAACACCAAAGCTGGTAAAGGAAAAGAGGAGAAGTGATAACTGACAGAGAGTAATAGAAAAGTTTTTAATCCCAAAAATGAATAATCAGGAGCGTAGTTATGGAATTTGATAACACATTATTAATTGATGCAGCAAATGAGTTTTGCTGGGAAACTGGAAGATATATTGGAGACTATTGTGTCTGTGAACTTTGTG # Questionable array : NO Score: 2.58 # Score Detail : 1:0, 2:0, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAACTACAACCCTGTAAATATGCAGGGTTCTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.20,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //