Array 1 196013-200184 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJHFH010000002.1 Acinetobacter baumannii strain Aci00702 isolate Aci00702, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 196013 30 96.7 30 ............................A. TTAAAACAACGTTTTTTGCCCCGTCATAAA 196073 30 96.7 30 ............................A. GGAAACTAAAGCAACTAACCAAGTTGAAAA 196133 30 100.0 30 .............................. GAATTGGCTAAACCTGCATTGATTGCATGT 196193 30 93.3 30 ............................AA GATGAATACTTTCAAAACCGTAAACGTTAT 196253 30 96.7 30 .............................G CTACAAACTTTATAGCAAAATCATCTTCTA 196313 30 93.3 30 ............................AA ATAAAAAGAAATTGAATACAACCACCATTA 196373 30 96.7 30 .............................A TAACATCATTTTCAGTATCACAAACGATTA 196433 30 100.0 30 .............................. TACCATATCGTGTTGCGCCAATAACTTGCA 196493 30 96.7 30 ............................G. ATGAGTCACTTCCATCTGACTATACAGATA 196553 30 96.7 30 ............................G. ATGATGCCGTAGCTTCTCAAATCATGTCTG 196613 30 96.7 30 .............................A AGGCATATGGCAAATTTGAAGAAGTTAAAA 196673 30 93.3 30 ............................AC TGAGATGTTCAAAAGATCAAAATCCTCTTT 196733 30 96.7 30 ............................G. ACGCACCGCACCCAGCTTTTTTCATAACTG 196793 30 93.3 30 ............................GC TTTTTTTTACTTCTTCTTCAACTTGTTTAA 196853 30 93.3 30 ............................AA GCACGAGACCAATCAAGCATCTTTGTTAAT 196913 30 100.0 30 .............................. TGAAAAGCCACATTCGCAAAGTTCAGATAA 196973 30 100.0 30 .............................. GGAAAAGCCACACTCACACAATTGGGAAAT 197033 30 96.7 30 .............................G GTAAAGTCCTAGTTCATACCTGGTAGTAAC 197093 30 93.3 30 ............................CG AAAGCACCACCACAAGAAAATGAAGAAAAA 197153 30 100.0 30 .............................. GGAAAAGCCACACTCACACAATTGGGAAAT 197213 30 100.0 30 .............................. GGAAAAGCCACACTCACACAATTGGGAAAT 197273 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 197333 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 197393 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 197453 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 197513 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 197573 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 197633 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 197693 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 197753 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 197813 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 197873 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 197933 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 197993 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 198053 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 198113 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 198173 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 198233 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 198293 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 198353 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 198413 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 198473 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 198533 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 198593 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 198653 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 198713 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 198773 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 198833 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 198893 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 198953 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 199013 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 199073 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 199133 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 199194 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 199254 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 199314 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 199374 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 199434 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 199494 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 199554 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 199614 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 199675 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 199735 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 199795 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 199855 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 199915 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 199975 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 200035 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 200095 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 200155 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 70 30 95.8 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.37 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.32, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //