Array 1 168754-166547 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNBE010000005.1 Ruminococcus bromii strain 1001713B170207_170306_G10 NODE_5_length_179830_cov_49.3706, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 168753 36 100.0 30 .................................... AGTATTAGAATACGCAACTATTTTCAGTAA 168687 36 100.0 30 .................................... TTTTAATTTCTGTGTACCCTTTAAGCGCAA 168621 36 100.0 29 .................................... AAAATTCGTTGTAAGTGGCGACCACCTCA 168556 36 100.0 31 .................................... CGATTTGCGGGAGTGGGCGAAACATTGCAAG 168489 36 100.0 29 .................................... TTTCTTGCGCCACGATTCATTTAATTCAT 168424 36 100.0 30 .................................... CAACAATTGTGAATCCACCCGACCCCAATT 168358 36 100.0 30 .................................... ATTCGTCATTCATCCATTTGCGAGCCTCAC 168292 36 100.0 30 .................................... ATGTGATTCCGATTTTTGAGAACGGCGGAA 168226 36 100.0 30 .................................... GAGGAAATCAAGAACACACTCCGAAATAAG 168160 36 100.0 29 .................................... TATTTTTTGTTCCGATAATGCTGATGTTT 168095 36 100.0 29 .................................... TAGTTTCCCATTTTCGTACAAGGAATCAT 168030 36 100.0 29 .................................... GGATTTTGCTTCTGATGATTTGCCATAGT 167965 36 100.0 30 .................................... TGAAAAATGATAGTCAAGAGCATTTTGCGT 167899 36 100.0 30 .................................... AAAAAAACACCCCTGATGAGTGTAACCCGC 167833 36 100.0 30 .................................... GGTATTGACAAACATTGCAAAATGTGGTAC 167767 36 100.0 30 .................................... ATGCGTGTCAGTGATAGCTTTATGAATGAC 167701 36 100.0 30 .................................... ACAGCGTAACGGATGATTACGACTTTATGA 167635 36 100.0 30 .................................... TGGTTTAAGTCTGATAAGGCAGGCGGCAGA 167569 36 100.0 29 .................................... TTCAAGAAATTCTCAAAAACTTTTCAAAT 167504 36 100.0 29 .................................... CAAATGCCGGAAACTCTCTCAGAGTACCC 167439 36 100.0 30 .................................... TTCTTCATAGTAAATCCTTTCTGCATAGCT 167373 36 100.0 30 .................................... TTCAAATTCCCAGTCAAGTCGTCCGAACTG 167307 36 100.0 30 .................................... TCTTATTCAAATGGTAAGTCACGGTTGCTC 167241 36 100.0 30 .................................... ATATTCCCAACTTCCGTGCTTAATCTCTTG 167175 36 100.0 30 .................................... TTGTGCCTCTCCCGCAAATCTATAAGTCAC 167109 36 100.0 30 .................................... GGTTCTTTCAAGGTTGCGTTTAACTTCCGA 167043 36 100.0 30 .................................... TGATTTGGTCTGCACAGTTTAACGCTATTG 166977 36 100.0 30 .................................... ATATGACGGCTAAATCCAAAGCTGACGGAA 166911 36 100.0 30 .................................... TTCACTGTTTCCCTGTTGGTGTACCACCAT 166845 36 100.0 29 .................................... GAATTATATTTTGAATCATGTTATGCTGG 166780 36 100.0 30 .................................... CGATGCCAAAGCAAAACTTGCCGTGCTTGC 166714 36 100.0 30 .................................... TTTTCCGGTTGAATTAACCGTTGCAACATA 166648 36 100.0 30 .................................... TCTTTACCGCTTGGCGAGAGTGACAATTGC 166582 34 88.9 0 .......................T...--......T | C,A [166550,166561] ========== ====== ====== ====== ==================================== =============================== ================== 34 36 99.7 30 GTTTGAGAATAGTGTAAATCTATAAGGTAGTAAAAC # Left flank : TTTTTTTGAAAATTTGTGTAATACAAAATATTTTCCGCAAATTTCAGAAATTAAAGCTTTATGTGTGAGCCTGTGCTGCGAGCTTTCTAAGGAAAATGATTATGATTTTCAGTTCTGCGAAAGTATTGAAACAATGGCATTAGTAAAATTGTTTTCATTTGCGCCTGCAGATGCCTCGGATGATAATGTCGGTCATCTTTTAAGATATTTCAAACTTATGAAAGAGTATCTTGGAATAAAGTGTTTTATTGTTCAAAATCTGCATATTTATCTTGATGACAGAGAATGTGAAAATCTTTTGGAATCCGCCGTTATGCACGGTATATATTTGCTTAACATTGAAAACTCAGTGCCGAAAGAAGTTTCTGAATACGAAAAACTTGTTGTGATTGATAATGATTTGTGCGAATTTTATTGACAATCATTATACAAATGTTATAAAATGACCTTATAGATTTGCCGTGTACAGTATAGTGGGTGCATTTTATTCCCTATTTGAG # Right flank : TTTACTCGTGGACTGTGAAAAAACAGCATTGCAAAAAACAATAAGGCACATAACCGTTATCACTTTCGGTTATGTGCCTTTTGTAATATAATAAATTTGTTAAGAATACCACGATTGATTACAGTCCAAAACAAGGAAGATTTCAGTGCGTTAATTTCCAAAGTAAGTTCCAGCATGAAAGTTACTTTGAAAATTAACTATTTACTTTTTTGTTTAAGTTTGCGGTAAATATGAATTGTATAATCCGTTATATTGTGTTATTATGTAGTAAAATGGTGTGCAACATTGGTATTTTAAAAAAATTATGTTGCTGAAATTAAACTTGAAATAACTGACGGGTGGCATATGGTTCGCAAAGTTGACAAAACAAAGCTTCTGACTGTTGTCGGGATAATTATATTCCTGTTTGGAGGTGCGGTGAGAATTTTTTCTCATCTTACTTCCTCGGCGGACAATTATATTGAAAATTTTGATGTTATTATCTTTTCGGGGCTTATTAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAATAGTGTAAATCTATAAGGTAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //